RNA–Protein interactions for RNA: ENST00000563783.5

SPG7-208, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-208ENST00000563783 TERF2IPQ9NYB0 399 aa35.54■■■■□ 3.28
SPG7-208ENST00000563783 WDR17Q8IZU2 1322 aa35.54■■■■□ 3.28
SPG7-208ENST00000563783 CLSPNQ9HAW4 1339 aa35.54■■■■□ 3.28
SPG7-208ENST00000563783 SRCAPQ6ZRS2 3230 aa35.53■■■■□ 3.28
SPG7-208ENST00000563783 TIMELESSQ9UNS1 1208 aa35.52■■■■□ 3.28
SPG7-208ENST00000563783 FAM182BQ5T319 152 aa35.51■■■■□ 3.28
SPG7-208ENST00000563783 PARD3Q8TEW0 1356 aa35.5■■■■□ 3.27
SPG7-208ENST00000563783 ST20-MTHFSA0A0A6YYL1 179 aa35.49■■■■□ 3.27
SPG7-208ENST00000563783 TMC1Q8TDI8 760 aa35.49■■■■□ 3.27
SPG7-208ENST00000563783 LRRC37A3O60309 1634 aa35.48■■■■□ 3.27
SPG7-208ENST00000563783 CDCA7Q9BWT1 371 aaPredicted RBP35.48■■■■□ 3.27
SPG7-208ENST00000563783 SLC12A5Q9H2X9 1139 aa35.48■■■■□ 3.27
SPG7-208ENST00000563783 ZBTB7CA1YPR0 619 aa35.47■■■■□ 3.27
SPG7-208ENST00000563783 AXIN2Q9Y2T1 843 aa35.47■■■■□ 3.27
SPG7-208ENST00000563783 A0A1W2PP64 1363 aa35.47■■■■□ 3.27
SPG7-208ENST00000563783 LTN1O94822 1766 aa35.46■■■■□ 3.27
SPG7-208ENST00000563783 PEAK1Q9H792 1746 aa35.46■■■■□ 3.27
SPG7-208ENST00000563783 TOM1L2Q6ZVM7 507 aa35.45■■■■□ 3.27
SPG7-208ENST00000563783 SUGP2Q8IX01 1082 aaKnown RBP eCLIP35.43■■■■□ 3.26
SPG7-208ENST00000563783 CARD10Q9BWT7 1032 aa35.42■■■■□ 3.26
SPG7-208ENST00000563783 OVOS2A0A0G2JMS6 1433 aa35.41■■■■□ 3.26
SPG7-208ENST00000563783 OVOS2A0A0J9YW53 1432 aa35.41■■■■□ 3.26
SPG7-208ENST00000563783 OVOS2Q6IE36 1432 aa35.41■■■■□ 3.26
SPG7-208ENST00000563783 TRIM37O94972 964 aa35.41■■■■□ 3.26
SPG7-208ENST00000563783 EN1Q05925 392 aaPredicted RBP35.41■■■■□ 3.26
SPG7-208ENST00000563783 NME9Q86XW9 330 aa35.41■■■■□ 3.26
SPG7-208ENST00000563783 USP47Q96K76 1375 aa35.4■■■■□ 3.26
SPG7-208ENST00000563783 SBF2Q86WG5 1849 aa35.4■■■■□ 3.26
SPG7-208ENST00000563783 LRP5O75197 1615 aa35.39■■■■□ 3.26
SPG7-208ENST00000563783 CCDC7Q96M83 1385 aa35.39■■■■□ 3.26
SPG7-208ENST00000563783 RREB1Q92766 1687 aa35.39■■■■□ 3.26
SPG7-208ENST00000563783 BCL9O00512 1426 aa35.38■■■■□ 3.25
SPG7-208ENST00000563783 RGPD3A6NKT7 1758 aaPredicted RBP35.38■■■■□ 3.25
SPG7-208ENST00000563783 RGPD4Q7Z3J3 1758 aa35.38■■■■□ 3.25
SPG7-208ENST00000563783 DDB1Q16531 1140 aa35.37■■■■□ 3.25
SPG7-208ENST00000563783 CAMKK2Q96RR4 588 aa35.37■■■■□ 3.25
SPG7-208ENST00000563783 SOX12O15370 315 aa35.36■■■■□ 3.25
SPG7-208ENST00000563783 TMF1P82094 1093 aa35.34■■■■□ 3.25
SPG7-208ENST00000563783 ANKRD36BQ8N2N9 1353 aa35.34■■■■□ 3.25
SPG7-208ENST00000563783 CSB-PGBD3P0DP91 1061 aa35.33■■■■□ 3.25
SPG7-208ENST00000563783 ERBB3P21860 1342 aa35.32■■■■□ 3.25
SPG7-208ENST00000563783 APBA3O96018 575 aa35.32■■■■□ 3.24
SPG7-208ENST00000563783 FAM208AQ9UK61 1670 aaKnown RBP35.31■■■■□ 3.24
SPG7-208ENST00000563783 CDCA8Q53HL2 280 aa35.31■■■■□ 3.24
SPG7-208ENST00000563783 EZH2Q15910 746 aaKnown RBP35.29■■■■□ 3.24
SPG7-208ENST00000563783 NUP188Q5SRE5 1749 aa35.29■■■■□ 3.24
SPG7-208ENST00000563783 TNS2Q63HR2 1409 aa35.24■■■■□ 3.23
SPG7-208ENST00000563783 COG3Q96JB2 828 aa35.22■■■■□ 3.23
SPG7-208ENST00000563783 MARCH10Q8NA82 808 aaPredicted RBP35.21■■■■□ 3.23
SPG7-208ENST00000563783 EXOC5O00471 708 aa35.2■■■■□ 3.23
SPG7-208ENST00000563783 IP6K1Q92551 441 aa35.2■■■■□ 3.23
SPG7-208ENST00000563783 BCL11BQ9C0K0 894 aaPredicted RBP35.2■■■■□ 3.23
SPG7-208ENST00000563783 PSDA5PKW4 1024 aaPredicted RBP35.19■■■■□ 3.22
SPG7-208ENST00000563783 PLSCR1O15162 318 aa35.19■■■■□ 3.22
SPG7-208ENST00000563783 ANKRD24Q8TF21 1146 aa35.17■■■■□ 3.22
SPG7-208ENST00000563783 PCGF6Q9BYE7 350 aa35.17■■■■□ 3.22
SPG7-208ENST00000563783 NLRP2Q9NX02 1062 aa35.17■■■■□ 3.22
SPG7-208ENST00000563783 KIF20BQ96Q89 1820 aa35.17■■■■□ 3.22
SPG7-208ENST00000563783 MYOM1P52179 1685 aa35.17■■■■□ 3.22
SPG7-208ENST00000563783 R3HDM1Q15032 1099 aaKnown RBP35.15■■■■□ 3.22
SPG7-208ENST00000563783 RTL1A6NKG5 1358 aa35.14■■■■□ 3.22
SPG7-208ENST00000563783 IL2RBP14784 551 aa35.13■■■■□ 3.21
SPG7-208ENST00000563783 NBPF14Q5TI25 921 aa35.13■■■■□ 3.21
SPG7-208ENST00000563783 NHSQ6T4R5 1651 aa35.11■■■■□ 3.21
SPG7-208ENST00000563783 MAP3K19Q56UN5 1328 aa35.1■■■■□ 3.21
SPG7-208ENST00000563783 FYB1O15117 783 aa35.1■■■■□ 3.21
SPG7-208ENST00000563783 KIF24Q5T7B8 1368 aa35.06■■■■□ 3.2
SPG7-208ENST00000563783 HOXC9P31274 260 aa35.06■■■■□ 3.2
SPG7-208ENST00000563783 AMPHP49418 695 aa35.03■■■■□ 3.2
SPG7-208ENST00000563783 RGPD2P0DJD1 1756 aa35■■■■□ 3.19
SPG7-208ENST00000563783 KAT6BQ8WYB5 2073 aa35■■■■□ 3.19
SPG7-208ENST00000563783 PTF1AQ7RTS3 328 aa34.99■■■■□ 3.19
SPG7-208ENST00000563783 GGNBP2Q9H3C7 697 aa34.99■■■■□ 3.19
SPG7-208ENST00000563783 SMG6Q86US8 1419 aaKnown RBP34.96■■■■□ 3.19
SPG7-208ENST00000563783 NSD3Q9BZ95 1437 aa34.96■■■■□ 3.19
SPG7-208ENST00000563783 BTAF1O14981 1849 aa34.95■■■■□ 3.19
SPG7-208ENST00000563783 CARD14Q9BXL6 1004 aa34.95■■■■□ 3.19
SPG7-208ENST00000563783 ANKRD26Q9UPS8 1709 aa34.95■■■■□ 3.18
SPG7-208ENST00000563783 CCER1Q8TC90 406 aaPredicted RBP34.94■■■■□ 3.18
SPG7-208ENST00000563783 LTV1Q96GA3 475 aaPredicted RBP34.94■■■■□ 3.18
SPG7-208ENST00000563783 INSRP06213 1382 aa34.94■■■■□ 3.18
SPG7-208ENST00000563783 FLT4P35916 1363 aa34.93■■■■□ 3.18
SPG7-208ENST00000563783 PROM2Q8N271 834 aa34.93■■■■□ 3.18
SPG7-208ENST00000563783 CGNL1Q0VF96 1302 aa34.92■■■■□ 3.18
SPG7-208ENST00000563783 FBLN1P23142 703 aa34.92■■■■□ 3.18
SPG7-208ENST00000563783 SHANK3Q9BYB0 1731 aa34.92■■■■□ 3.18
SPG7-208ENST00000563783 EIF4G2P78344 907 aaKnown RBP eCLIP34.91■■■■□ 3.18
SPG7-208ENST00000563783 RRS1Q15050 365 aaKnown RBP34.91■■■■□ 3.18
SPG7-208ENST00000563783 CASZ1Q86V15 1759 aa34.91■■■■□ 3.18
SPG7-208ENST00000563783 TXNRD1Q16881 649 aa34.9■■■■□ 3.18
SPG7-208ENST00000563783 KCNQ2O43526 872 aa34.89■■■■□ 3.18
SPG7-208ENST00000563783 MEGF6O75095 1541 aa34.86■■■■□ 3.17
SPG7-208ENST00000563783 ANO8Q9HCE9 1232 aaPredicted RBP34.85■■■■□ 3.17
SPG7-208ENST00000563783 MAP2P11137 1827 aaKnown RBP34.85■■■■□ 3.17
SPG7-208ENST00000563783 SPON1Q9HCB6 807 aa34.84■■■■□ 3.17
SPG7-208ENST00000563783 PAPPAQ13219 1627 aa34.84■■■■□ 3.17
SPG7-208ENST00000563783 NBPF6Q5VWK0 638 aa34.83■■■■□ 3.17
SPG7-208ENST00000563783 ZCRB1Q8TBF4 217 aaKnown RBP34.83■■■■□ 3.17
SPG7-208ENST00000563783 NBPF4Q96M43 638 aa34.83■■■■□ 3.17
SPG7-208ENST00000563783 ACSBG1Q96GR2 724 aa34.82■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms