RNA–Protein interactions for RNA: ENST00000563668.5

SPSB3-202, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 1,509 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-202ENST00000563668 FAM182BQ5T319 152 aa23.69■■□□□ 1.38
SPSB3-202ENST00000563668 USP54Q70EL1 1684 aa23.68■■□□□ 1.38
SPSB3-202ENST00000563668 THSD7AQ9UPZ6 1657 aa23.68■■□□□ 1.38
SPSB3-202ENST00000563668 EIF4G2P78344 907 aaKnown RBP eCLIP23.67■■□□□ 1.38
SPSB3-202ENST00000563668 OVOS2A0A0J9YW53 1432 aa23.67■■□□□ 1.38
SPSB3-202ENST00000563668 OVOS2Q6IE36 1432 aa23.67■■□□□ 1.38
SPSB3-202ENST00000563668 RGPD5Q99666 1765 aa23.67■■□□□ 1.38
SPSB3-202ENST00000563668 FBLN1P23142 703 aa23.65■■□□□ 1.38
SPSB3-202ENST00000563668 CDCA8Q53HL2 280 aa23.65■■□□□ 1.38
SPSB3-202ENST00000563668 MYOM1P52179 1685 aa23.65■■□□□ 1.38
SPSB3-202ENST00000563668 TCP11L2Q8N4U5 519 aa23.64■■□□□ 1.38
SPSB3-202ENST00000563668 CARD14Q9BXL6 1004 aa23.64■■□□□ 1.38
SPSB3-202ENST00000563668 BARGINQ6ZT62 677 aa23.64■■□□□ 1.37
SPSB3-202ENST00000563668 CRB1P82279 1406 aa23.62■■□□□ 1.37
SPSB3-202ENST00000563668 FYB1O15117 783 aa23.62■■□□□ 1.37
SPSB3-202ENST00000563668 POLR3GLQ9BT43 218 aa23.62■■□□□ 1.37
SPSB3-202ENST00000563668 C11orf95C9JLR9 678 aaPredicted RBP23.61■■□□□ 1.37
SPSB3-202ENST00000563668 GGNBP2Q9H3C7 697 aa23.61■■□□□ 1.37
SPSB3-202ENST00000563668 WDR17Q8IZU2 1322 aa23.6■■□□□ 1.37
SPSB3-202ENST00000563668 TOM1L2Q6ZVM7 507 aa23.6■■□□□ 1.37
SPSB3-202ENST00000563668 LTN1O94822 1766 aa23.59■■□□□ 1.37
SPSB3-202ENST00000563668 COG3Q96JB2 828 aa23.59■■□□□ 1.37
SPSB3-202ENST00000563668 THRAP3Q9Y2W1 955 aaKnown RBP23.58■■□□□ 1.36
SPSB3-202ENST00000563668 CCDC125Q86Z20 511 aa23.57■■□□□ 1.36
SPSB3-202ENST00000563668 BLMP54132 1417 aaPredicted RBP23.56■■□□□ 1.36
SPSB3-202ENST00000563668 CSB-PGBD3P0DP91 1061 aa23.56■■□□□ 1.36
SPSB3-202ENST00000563668 DEFB132Q7Z7B7 95 aa23.56■■□□□ 1.36
SPSB3-202ENST00000563668 NSD3Q9BZ95 1437 aa23.54■■□□□ 1.36
SPSB3-202ENST00000563668 MAP3K19Q56UN5 1328 aa23.54■■□□□ 1.36
SPSB3-202ENST00000563668 CARD10Q9BWT7 1032 aa23.54■■□□□ 1.36
SPSB3-202ENST00000563668 ABCC6O95255 1503 aa23.53■■□□□ 1.36
SPSB3-202ENST00000563668 ERBB3P21860 1342 aa23.52■■□□□ 1.36
SPSB3-202ENST00000563668 RRS1Q15050 365 aaKnown RBP23.52■■□□□ 1.36
SPSB3-202ENST00000563668 MIER1Q8N108 512 aa23.52■■□□□ 1.36
SPSB3-202ENST00000563668 IP6K1Q92551 441 aa23.52■■□□□ 1.36
SPSB3-202ENST00000563668 PDE3BQ13370 1112 aa23.51■■□□□ 1.35
SPSB3-202ENST00000563668 ANKRD24Q8TF21 1146 aa23.51■■□□□ 1.35
SPSB3-202ENST00000563668 PARP4Q9UKK3 1724 aaKnown RBP23.51■■□□□ 1.35
SPSB3-202ENST00000563668 KIF20BQ96Q89 1820 aa23.49■■□□□ 1.35
SPSB3-202ENST00000563668 HOXC9P31274 260 aa23.49■■□□□ 1.35
SPSB3-202ENST00000563668 LTV1Q96GA3 475 aaPredicted RBP23.49■■□□□ 1.35
SPSB3-202ENST00000563668 NLRP2Q9NX02 1062 aa23.49■■□□□ 1.35
SPSB3-202ENST00000563668 DISP2A7MBM2 1401 aa23.47■■□□□ 1.35
SPSB3-202ENST00000563668 LRRC37A3O60309 1634 aa23.47■■□□□ 1.35
SPSB3-202ENST00000563668 WNK3Q9BYP7 1800 aa23.47■■□□□ 1.35
SPSB3-202ENST00000563668 TRIM37O94972 964 aa23.47■■□□□ 1.35
SPSB3-202ENST00000563668 FAM196AQ6ZSG2 479 aa23.47■■□□□ 1.35
SPSB3-202ENST00000563668 PANK3Q9H999 370 aa23.47■■□□□ 1.35
SPSB3-202ENST00000563668 AMPHP49418 695 aa23.46■■□□□ 1.35
SPSB3-202ENST00000563668 SF3B2Q13435 895 aaKnown RBP23.46■■□□□ 1.35
SPSB3-202ENST00000563668 DDB1Q16531 1140 aa23.46■■□□□ 1.35
SPSB3-202ENST00000563668 CCDC7Q96M83 1385 aa23.44■■□□□ 1.34
SPSB3-202ENST00000563668 MARCH10Q8NA82 808 aaPredicted RBP23.43■■□□□ 1.34
SPSB3-202ENST00000563668 KIF7Q2M1P5 1343 aa23.43■■□□□ 1.34
SPSB3-202ENST00000563668 EN1Q05925 392 aaPredicted RBP23.43■■□□□ 1.34
SPSB3-202ENST00000563668 TNS1Q9HBL0 1735 aaKnown RBP23.42■■□□□ 1.34
SPSB3-202ENST00000563668 PEAK1Q9H792 1746 aa23.41■■□□□ 1.34
SPSB3-202ENST00000563668 CGNL1Q0VF96 1302 aa23.41■■□□□ 1.34
SPSB3-202ENST00000563668 CDCA7Q9BWT1 371 aaPredicted RBP23.41■■□□□ 1.34
SPSB3-202ENST00000563668 RGPD1P0DJD0 1748 aa23.41■■□□□ 1.34
SPSB3-202ENST00000563668 HSP90AB2PQ58FF8 381 aa23.4■■□□□ 1.34
SPSB3-202ENST00000563668 PTF1AQ7RTS3 328 aa23.4■■□□□ 1.34
SPSB3-202ENST00000563668 EMILIN1Q9Y6C2 1016 aa23.4■■□□□ 1.34
SPSB3-202ENST00000563668 RGPD2P0DJD1 1756 aa23.4■■□□□ 1.34
SPSB3-202ENST00000563668 BAG6P46379 1132 aa23.39■■□□□ 1.34
SPSB3-202ENST00000563668 EXOC5O00471 708 aa23.38■■□□□ 1.33
SPSB3-202ENST00000563668 SRCAPQ6ZRS2 3230 aa23.38■■□□□ 1.33
SPSB3-202ENST00000563668 IL2RBP14784 551 aa23.38■■□□□ 1.33
SPSB3-202ENST00000563668 EZH2Q15910 746 aaKnown RBP23.37■■□□□ 1.33
SPSB3-202ENST00000563668 RTL1A6NKG5 1358 aa23.37■■□□□ 1.33
SPSB3-202ENST00000563668 OVOS2A0A0G2JMS6 1433 aa23.36■■□□□ 1.33
SPSB3-202ENST00000563668 APBA3O96018 575 aa23.36■■□□□ 1.33
SPSB3-202ENST00000563668 NBPF6Q5VWK0 638 aa23.36■■□□□ 1.33
SPSB3-202ENST00000563668 NBPF4Q96M43 638 aa23.36■■□□□ 1.33
SPSB3-202ENST00000563668 TNNT2P45379 298 aaPredicted RBP23.35■■□□□ 1.33
SPSB3-202ENST00000563668 USHBP1Q8N6Y0 703 aa23.34■■□□□ 1.33
SPSB3-202ENST00000563668 CAMKK2Q96RR4 588 aa23.34■■□□□ 1.33
SPSB3-202ENST00000563668 TNS2Q63HR2 1409 aa23.34■■□□□ 1.33
SPSB3-202ENST00000563668 FAM208AQ9UK61 1670 aaKnown RBP23.34■■□□□ 1.33
SPSB3-202ENST00000563668 INSRP06213 1382 aa23.34■■□□□ 1.33
SPSB3-202ENST00000563668 PPM1GO15355 546 aaPredicted RBP23.33■■□□□ 1.33
SPSB3-202ENST00000563668 POLKQ9UBT6 870 aa23.33■■□□□ 1.33
SPSB3-202ENST00000563668 SBF2Q86WG5 1849 aa23.33■■□□□ 1.33
SPSB3-202ENST00000563668 FLT4P35916 1363 aa23.33■■□□□ 1.32
SPSB3-202ENST00000563668 WASHC2AQ641Q2 1341 aa23.31■■□□□ 1.32
SPSB3-202ENST00000563668 MAP2P11137 1827 aaKnown RBP23.31■■□□□ 1.32
SPSB3-202ENST00000563668 ANKRD26Q9UPS8 1709 aa23.3■■□□□ 1.32
SPSB3-202ENST00000563668 KIF24Q5T7B8 1368 aa23.3■■□□□ 1.32
SPSB3-202ENST00000563668 BCL9O00512 1426 aa23.29■■□□□ 1.32
SPSB3-202ENST00000563668 KCNQ2O43526 872 aa23.28■■□□□ 1.32
SPSB3-202ENST00000563668 MEGF6O75095 1541 aa23.28■■□□□ 1.32
SPSB3-202ENST00000563668 PER1O15534 1290 aaPredicted RBP23.27■■□□□ 1.32
SPSB3-202ENST00000563668 AMER1Q5JTC6 1135 aaPredicted RBP23.27■■□□□ 1.32
SPSB3-202ENST00000563668 ACSBG1Q96GR2 724 aa23.27■■□□□ 1.32
SPSB3-202ENST00000563668 BCL11BQ9C0K0 894 aaPredicted RBP23.27■■□□□ 1.32
SPSB3-202ENST00000563668 KNSTRNQ9Y448 316 aa23.27■■□□□ 1.32
SPSB3-202ENST00000563668 DDX54Q8TDD1 881 aaKnown RBP23.26■■□□□ 1.31
SPSB3-202ENST00000563668 PSDA5PKW4 1024 aaPredicted RBP23.25■■□□□ 1.31
SPSB3-202ENST00000563668 CENPBP07199 599 aaPredicted RBP23.25■■□□□ 1.31
SPSB3-202ENST00000563668 SMG6Q86US8 1419 aaKnown RBP23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms