RNA–Protein interactions for RNA: ENST00000563667.5

PDXDC1-209, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 4

Gene PDXDC1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-209ENST00000563667 SLIT2O94813 1529 aa20.69■□□□□ 0.9
PDXDC1-209ENST00000563667 RRS1Q15050 365 aaKnown RBP20.69■□□□□ 0.9
PDXDC1-209ENST00000563667 EMILIN1Q9Y6C2 1016 aa20.69■□□□□ 0.9
PDXDC1-209ENST00000563667 FAM83GA6ND36 823 aa20.68■□□□□ 0.9
PDXDC1-209ENST00000563667 GJD4Q96KN9 370 aaPredicted RBP20.68■□□□□ 0.9
PDXDC1-209ENST00000563667 CCDC9Q9Y3X0 531 aaKnown RBP20.68■□□□□ 0.9
PDXDC1-209ENST00000563667 ABCA3Q99758 1704 aa20.67■□□□□ 0.9
PDXDC1-209ENST00000563667 PRDM11Q9NQV5 511 aa20.66■□□□□ 0.9
PDXDC1-209ENST00000563667 KCNH5Q8NCM2 988 aa20.65■□□□□ 0.9
PDXDC1-209ENST00000563667 BTG4Q9NY30 223 aa20.64■□□□□ 0.89
PDXDC1-209ENST00000563667 MAP2P11137 1827 aaKnown RBP20.64■□□□□ 0.89
PDXDC1-209ENST00000563667 USP54Q70EL1 1684 aa20.64■□□□□ 0.89
PDXDC1-209ENST00000563667 ZBTB7CA1YPR0 619 aa20.63■□□□□ 0.89
PDXDC1-209ENST00000563667 ZC3H6P61129 1189 aaKnown RBP20.63■□□□□ 0.89
PDXDC1-209ENST00000563667 NUDCQ9Y266 331 aa20.63■□□□□ 0.89
PDXDC1-209ENST00000563667 MAP3K19Q56UN5 1328 aa20.62■□□□□ 0.89
PDXDC1-209ENST00000563667 PLCH1Q4KWH8 1693 aa20.62■□□□□ 0.89
PDXDC1-209ENST00000563667 DIAPH1O60610 1272 aaKnown RBP20.62■□□□□ 0.89
PDXDC1-209ENST00000563667 AMPHP49418 695 aa20.62■□□□□ 0.89
PDXDC1-209ENST00000563667 VPS72Q15906 364 aa20.62■□□□□ 0.89
PDXDC1-209ENST00000563667 ADAMTS8Q9UP79 889 aa20.62■□□□□ 0.89
PDXDC1-209ENST00000563667 SMG6Q86US8 1419 aaKnown RBP20.61■□□□□ 0.89
PDXDC1-209ENST00000563667 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.61■□□□□ 0.89
PDXDC1-209ENST00000563667 USP19O94966 1318 aa20.61■□□□□ 0.89
PDXDC1-209ENST00000563667 GCP02774 474 aa20.61■□□□□ 0.89
PDXDC1-209ENST00000563667 KIAA0232Q92628 1395 aa20.6■□□□□ 0.89
PDXDC1-209ENST00000563667 U2SURPO15042 1029 aaKnown RBP20.6■□□□□ 0.89
PDXDC1-209ENST00000563667 HNRNPUQ00839 825 aaKnown RBP eCLIP20.6■□□□□ 0.89
PDXDC1-209ENST00000563667 CHRNA2Q15822 529 aa20.6■□□□□ 0.89
PDXDC1-209ENST00000563667 UPF1Q92900 1129 aaKnown RBP eCLIP20.6■□□□□ 0.89
PDXDC1-209ENST00000563667 COL14A1Q05707 1796 aaKnown RBP20.59■□□□□ 0.89
PDXDC1-209ENST00000563667 INSRP06213 1382 aa20.59■□□□□ 0.89
PDXDC1-209ENST00000563667 SLIT3O75094 1523 aa20.58■□□□□ 0.89
PDXDC1-209ENST00000563667 COL3A1P02461 1466 aaPredicted RBP20.58■□□□□ 0.89
PDXDC1-209ENST00000563667 A0A0G2JS52 829 aa20.58■□□□□ 0.89
PDXDC1-209ENST00000563667 MYT1Q01538 1121 aa20.58■□□□□ 0.89
PDXDC1-209ENST00000563667 NWD2Q9ULI1 1742 aa20.58■□□□□ 0.88
PDXDC1-209ENST00000563667 CRYBG1Q9Y4K1 1723 aa20.58■□□□□ 0.88
PDXDC1-209ENST00000563667 PHRF1Q9P1Y6 1649 aaKnown RBP20.57■□□□□ 0.88
PDXDC1-209ENST00000563667 U2AF1L5P0DN76 240 aaPredicted RBP20.57■□□□□ 0.88
PDXDC1-209ENST00000563667 U2AF1Q01081 240 aaKnown RBP eCLIP20.57■□□□□ 0.88
PDXDC1-209ENST00000563667 GLI3P10071 1580 aa20.56■□□□□ 0.88
PDXDC1-209ENST00000563667 HSP90AB2PQ58FF8 381 aa20.56■□□□□ 0.88
PDXDC1-209ENST00000563667 STRN4Q9NRL3 753 aa20.56■□□□□ 0.88
PDXDC1-209ENST00000563667 NFAT5O94916 1531 aa20.56■□□□□ 0.88
PDXDC1-209ENST00000563667 FLT4P35916 1363 aa20.56■□□□□ 0.88
PDXDC1-209ENST00000563667 PEAK1Q9H792 1746 aa20.54■□□□□ 0.88
PDXDC1-209ENST00000563667 HOXC9P31274 260 aa20.54■□□□□ 0.88
PDXDC1-209ENST00000563667 IL13P35225 146 aa20.54■□□□□ 0.88
PDXDC1-209ENST00000563667 EVA1CP58658 441 aa20.54■□□□□ 0.88
PDXDC1-209ENST00000563667 CCDC146Q8IYE0 955 aa20.54■□□□□ 0.88
PDXDC1-209ENST00000563667 SEPT12Q8IYM1 358 aa20.54■□□□□ 0.88
PDXDC1-209ENST00000563667 SENP3-EIF4A1A0A087X0R7 540 aa20.53■□□□□ 0.88
PDXDC1-209ENST00000563667 EIF4A2Q14240 407 aaKnown RBP20.53■□□□□ 0.88
PDXDC1-209ENST00000563667 ARHGEF25Q86VW2 580 aa20.53■□□□□ 0.88
PDXDC1-209ENST00000563667 KIF24Q5T7B8 1368 aa20.53■□□□□ 0.88
PDXDC1-209ENST00000563667 RTL1A6NKG5 1358 aa20.52■□□□□ 0.88
PDXDC1-209ENST00000563667 FAM98CQ17RN3 349 aaKnown RBP20.52■□□□□ 0.88
PDXDC1-209ENST00000563667 IP6K1Q92551 441 aa20.52■□□□□ 0.88
PDXDC1-209ENST00000563667 NRAPQ86VF7 1730 aa20.51■□□□□ 0.87
PDXDC1-209ENST00000563667 LTV1Q96GA3 475 aaPredicted RBP20.51■□□□□ 0.87
PDXDC1-209ENST00000563667 CPDO75976 1380 aa20.5■□□□□ 0.87
PDXDC1-209ENST00000563667 LTN1O94822 1766 aa20.5■□□□□ 0.87
PDXDC1-209ENST00000563667 BLMP54132 1417 aaPredicted RBP20.5■□□□□ 0.87
PDXDC1-209ENST00000563667 SPATA31A5Q5VU36 1347 aa20.5■□□□□ 0.87
PDXDC1-209ENST00000563667 SPATA31A7Q8IWB4 1347 aa20.5■□□□□ 0.87
PDXDC1-209ENST00000563667 CENPBP07199 599 aaPredicted RBP20.48■□□□□ 0.87
PDXDC1-209ENST00000563667 USP35Q9P2H5 1018 aa20.48■□□□□ 0.87
PDXDC1-209ENST00000563667 SALL2Q9Y467 1007 aaPredicted RBP20.48■□□□□ 0.87
PDXDC1-209ENST00000563667 ONECUT3O60422 494 aaPredicted RBP20.47■□□□□ 0.87
PDXDC1-209ENST00000563667 HMOX1P09601 288 aa20.47■□□□□ 0.87
PDXDC1-209ENST00000563667 KRT27Q7Z3Y8 459 aa20.47■□□□□ 0.87
PDXDC1-209ENST00000563667 RUNDC1Q96C34 613 aa20.47■□□□□ 0.87
PDXDC1-209ENST00000563667 PNNQ9H307 717 aaKnown RBP20.47■□□□□ 0.87
PDXDC1-209ENST00000563667 FCHSD2O94868 740 aa20.45■□□□□ 0.86
PDXDC1-209ENST00000563667 SPATA31A1Q5TZJ5 1347 aa20.45■□□□□ 0.86
PDXDC1-209ENST00000563667 APAF1O14727 1248 aa20.44■□□□□ 0.86
PDXDC1-209ENST00000563667 NEFMP07197 916 aa20.44■□□□□ 0.86
PDXDC1-209ENST00000563667 LARP1Q6PKG0 1096 aaKnown RBP20.44■□□□□ 0.86
PDXDC1-209ENST00000563667 MAPK8IP3Q9UPT6 1336 aa20.44■□□□□ 0.86
PDXDC1-209ENST00000563667 CAMTA1Q9Y6Y1 1673 aa20.44■□□□□ 0.86
PDXDC1-209ENST00000563667 SULT6B1Q6IMI4 303 aa20.43■□□□□ 0.86
PDXDC1-209ENST00000563667 ANKRD24Q8TF21 1146 aa20.43■□□□□ 0.86
PDXDC1-209ENST00000563667 RSPH6AQ9H0K4 717 aa20.43■□□□□ 0.86
PDXDC1-209ENST00000563667 ZBED9Q6R2W3 1325 aa20.43■□□□□ 0.86
PDXDC1-209ENST00000563667 PRKAR2BP31323 418 aa20.42■□□□□ 0.86
PDXDC1-209ENST00000563667 EYA1Q99502 592 aa20.42■□□□□ 0.86
PDXDC1-209ENST00000563667 AXIN2Q9Y2T1 843 aa20.42■□□□□ 0.86
PDXDC1-209ENST00000563667 CCDC125Q86Z20 511 aa20.41■□□□□ 0.86
PDXDC1-209ENST00000563667 COL5A2P05997 1499 aaPredicted RBP20.4■□□□□ 0.86
PDXDC1-209ENST00000563667 AEBP1Q8IUX7 1158 aa20.4■□□□□ 0.86
PDXDC1-209ENST00000563667 TCP11L2Q8N4U5 519 aa20.4■□□□□ 0.86
PDXDC1-209ENST00000563667 LMO7Q8WWI1 1683 aa20.4■□□□□ 0.86
PDXDC1-209ENST00000563667 PLEKHF1Q96S99 279 aa20.4■□□□□ 0.86
PDXDC1-209ENST00000563667 CSB-PGBD3P0DP91 1061 aa20.39■□□□□ 0.85
PDXDC1-209ENST00000563667 SF3B2Q13435 895 aaKnown RBP20.39■□□□□ 0.85
PDXDC1-209ENST00000563667 NEUROD2Q15784 382 aa20.39■□□□□ 0.85
PDXDC1-209ENST00000563667 IGSF1Q8N6C5 1336 aa20.38■□□□□ 0.85
PDXDC1-209ENST00000563667 TOM1L2Q6ZVM7 507 aa20.38■□□□□ 0.85
PDXDC1-209ENST00000563667 RRP7AQ9Y3A4 280 aaKnown RBP20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms