RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 GOPCQ9HD26 462 aa7.94□□□□□ -1.14
CDR2-203ENST00000563573 FKBPLQ9UIM3 349 aa7.94□□□□□ -1.14
CDR2-203ENST00000563573 MAGEB6P1A0A0J9YX57 407 aa7.93□□□□□ -1.14
CDR2-203ENST00000563573 UPP2O95045 317 aa7.93□□□□□ -1.14
CDR2-203ENST00000563573 ZIC2O95409 532 aaPredicted RBP7.93□□□□□ -1.14
CDR2-203ENST00000563573 NXF1Q9UBU9 619 aaKnown RBP7.93□□□□□ -1.14
CDR2-203ENST00000563573 GPSM3Q9Y4H4 160 aa7.93□□□□□ -1.14
CDR2-203ENST00000563573 WIPF1O43516 503 aa7.92□□□□□ -1.14
CDR2-203ENST00000563573 ARHGAP9Q9BRR9 750 aa7.92□□□□□ -1.14
CDR2-203ENST00000563573 EMILIN1Q9Y6C2 1016 aa7.92□□□□□ -1.14
CDR2-203ENST00000563573 AP1G2O75843 785 aa7.91□□□□□ -1.14
CDR2-203ENST00000563573 INSM1Q01101 510 aaPredicted RBP7.91□□□□□ -1.14
CDR2-203ENST00000563573 PTK2Q05397 1052 aa7.91□□□□□ -1.14
CDR2-203ENST00000563573 LRRN4Q8WUT4 740 aa7.91□□□□□ -1.14
CDR2-203ENST00000563573 NCAPD3P42695 1498 aa7.91□□□□□ -1.14
CDR2-203ENST00000563573 BAZ1BQ9UIG0 1483 aaKnown RBP7.91□□□□□ -1.14
CDR2-203ENST00000563573 TOP2AP11388 1531 aaKnown RBP7.9□□□□□ -1.14
CDR2-203ENST00000563573 NR3C2P08235 984 aa7.9□□□□□ -1.14
CDR2-203ENST00000563573 FSHRP23945 695 aa7.9□□□□□ -1.14
CDR2-203ENST00000563573 ERFEQ4G0M1 354 aa7.9□□□□□ -1.14
CDR2-203ENST00000563573 ZBTB33Q86T24 672 aa7.9□□□□□ -1.14
CDR2-203ENST00000563573 CCDC116Q8IYX3 515 aa7.9□□□□□ -1.14
CDR2-203ENST00000563573 ITPKCQ96DU7 683 aa7.9□□□□□ -1.14
CDR2-203ENST00000563573 PCMTD1Q96MG8 357 aaPredicted RBP7.9□□□□□ -1.14
CDR2-203ENST00000563573 CARD14Q9BXL6 1004 aa7.9□□□□□ -1.14
CDR2-203ENST00000563573 NR6A1Q15406 480 aa7.89□□□□□ -1.15
CDR2-203ENST00000563573 SLC10A4Q96EP9 437 aa7.89□□□□□ -1.15
CDR2-203ENST00000563573 PURBQ96QR8 312 aaKnown RBP7.89□□□□□ -1.15
CDR2-203ENST00000563573 ZFAND3Q9H8U3 227 aa7.89□□□□□ -1.15
CDR2-203ENST00000563573 PGPEP1Q9NXJ5 209 aa7.89□□□□□ -1.15
CDR2-203ENST00000563573 HMGXB3Q12766 1538 aa7.88□□□□□ -1.15
CDR2-203ENST00000563573 DHX9Q08211 1270 aaKnown RBP7.88□□□□□ -1.15
CDR2-203ENST00000563573 TMEM259Q4ZIN3 620 aa7.88□□□□□ -1.15
CDR2-203ENST00000563573 IRF7Q92985 503 aa7.88□□□□□ -1.15
CDR2-203ENST00000563573 TRIM52Q96A61 297 aa7.88□□□□□ -1.15
CDR2-203ENST00000563573 MEIOBQ8N635 442 aa7.87□□□□□ -1.15
CDR2-203ENST00000563573 TSEN34Q9BSV6 310 aaKnown RBP7.87□□□□□ -1.15
CDR2-203ENST00000563573 BMP2P12643 396 aa7.86□□□□□ -1.15
CDR2-203ENST00000563573 RFC5P40937 340 aa7.86□□□□□ -1.15
CDR2-203ENST00000563573 NEUROD2Q15784 382 aa7.86□□□□□ -1.15
CDR2-203ENST00000563573 LINC00528Q8N1L1 170 aa7.86□□□□□ -1.15
CDR2-203ENST00000563573 H3BM21 787 aa7.85□□□□□ -1.15
CDR2-203ENST00000563573 MAN1A2O60476 641 aa7.85□□□□□ -1.15
CDR2-203ENST00000563573 USP17L8P0C7I0 530 aa7.85□□□□□ -1.15
CDR2-203ENST00000563573 KCTD15Q96SI1 283 aaPredicted RBP7.85□□□□□ -1.15
CDR2-203ENST00000563573 STK17AQ9UEE5 414 aa7.85□□□□□ -1.15
CDR2-203ENST00000563573 NBPF20Q3BBV1 942 aa7.84□□□□□ -1.15
CDR2-203ENST00000563573 C6orf118Q5T5N4 469 aa7.84□□□□□ -1.15
CDR2-203ENST00000563573 PPP1R26Q5T8A7 1209 aaPredicted RBP7.84□□□□□ -1.15
CDR2-203ENST00000563573 FBXO31Q5XUX0 539 aaPredicted RBP7.84□□□□□ -1.15
CDR2-203ENST00000563573 CCDC88BA6NC98 1476 aa7.83□□□□□ -1.16
CDR2-203ENST00000563573 ADAM32Q8TC27 787 aa7.83□□□□□ -1.16
CDR2-203ENST00000563573 FAM181BA6NEQ2 426 aa7.81□□□□□ -1.16
CDR2-203ENST00000563573 Q6ZVU0 165 aa7.81□□□□□ -1.16
CDR2-203ENST00000563573 DZIP3Q86Y13 1208 aaKnown RBP7.81□□□□□ -1.16
CDR2-203ENST00000563573 IL27Q8NEV9 243 aa7.81□□□□□ -1.16
CDR2-203ENST00000563573 SOS2Q07890 1332 aaPredicted RBP7.8□□□□□ -1.16
CDR2-203ENST00000563573 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.8□□□□□ -1.166e-9■□□□□ 8.2
CDR2-203ENST00000563573 HMX1Q9NP08 348 aaPredicted RBP7.8□□□□□ -1.16
CDR2-203ENST00000563573 CCDC125Q86Z20 511 aa7.79□□□□□ -1.16
CDR2-203ENST00000563573 EPS8L1Q8TE68 723 aa7.79□□□□□ -1.16
CDR2-203ENST00000563573 ZNF592Q92610 1267 aa7.79□□□□□ -1.16
CDR2-203ENST00000563573 TTLL8A6PVC2 850 aa7.78□□□□□ -1.16
CDR2-203ENST00000563573 APBB1O00213 710 aa7.78□□□□□ -1.16
CDR2-203ENST00000563573 GMPRP36959 345 aa7.78□□□□□ -1.16
CDR2-203ENST00000563573 INTS6LQ5JSJ4 861 aaKnown RBP7.78□□□□□ -1.16
CDR2-203ENST00000563573 LCE2CQ5TA81 110 aa7.78□□□□□ -1.16
CDR2-203ENST00000563573 SEPT12Q8IYM1 358 aa7.78□□□□□ -1.16
CDR2-203ENST00000563573 OCSTAMPQ9BR26 566 aa7.78□□□□□ -1.16
CDR2-203ENST00000563573 SOBPA7XYQ1 873 aa7.77□□□□□ -1.17
CDR2-203ENST00000563573 SPINT1O43278 529 aa7.77□□□□□ -1.17
CDR2-203ENST00000563573 VSIG8P0DPA2 414 aa7.77□□□□□ -1.17
CDR2-203ENST00000563573 VEGFBP49765 207 aa7.77□□□□□ -1.17
CDR2-203ENST00000563573 MCCD1P59942 119 aaPredicted RBP7.77□□□□□ -1.17
CDR2-203ENST00000563573 BANK1Q8NDB2 785 aa7.77□□□□□ -1.17
CDR2-203ENST00000563573 ZBBXA8MT70 800 aa7.76□□□□□ -1.17
CDR2-203ENST00000563573 SOCS7O14512 581 aa7.76□□□□□ -1.17
CDR2-203ENST00000563573 BRPF1P55201 1214 aaPredicted RBP7.76□□□□□ -1.17
CDR2-203ENST00000563573 CBLBQ13191 982 aa7.76□□□□□ -1.17
CDR2-203ENST00000563573 TRIM34Q9BYJ4 488 aa7.76□□□□□ -1.17
CDR2-203ENST00000563573 ESPNB1AK53 854 aa7.75□□□□□ -1.17
CDR2-203ENST00000563573 DNMT3LQ9UJW3 386 aa7.75□□□□□ -1.17
CDR2-203ENST00000563573 ERBB4Q15303 1308 aa7.75□□□□□ -1.17
CDR2-203ENST00000563573 PPFIA3O75145 1194 aa7.74□□□□□ -1.17
CDR2-203ENST00000563573 ZSCAN1Q8NBB4 408 aa7.74□□□□□ -1.17
CDR2-203ENST00000563573 ZNF330Q9Y3S2 320 aaPredicted RBP7.74□□□□□ -1.17
CDR2-203ENST00000563573 RNF20Q5VTR2 975 aa7.72□□□□□ -1.17
CDR2-203ENST00000563573 GJD4Q96KN9 370 aaPredicted RBP7.72□□□□□ -1.17
CDR2-203ENST00000563573 CADPSQ9ULU8 1353 aa7.71□□□□□ -1.17
CDR2-203ENST00000563573 FIGNL2A6NMB9 653 aa7.71□□□□□ -1.18
CDR2-203ENST00000563573 ERVH48-1M5A8F1 160 aa7.71□□□□□ -1.18
CDR2-203ENST00000563573 ADH1AP07327 375 aa7.71□□□□□ -1.18
CDR2-203ENST00000563573 RAB15P59190 212 aa7.71□□□□□ -1.18
CDR2-203ENST00000563573 RELBQ01201 579 aa7.71□□□□□ -1.18
CDR2-203ENST00000563573 TPRNQ4KMQ1 711 aa7.71□□□□□ -1.18
CDR2-203ENST00000563573 ZNF784Q8NCA9 323 aaPredicted RBP7.71□□□□□ -1.18
CDR2-203ENST00000563573 TMPRSS4Q9NRS4 437 aa7.71□□□□□ -1.18
CDR2-203ENST00000563573 PRDM2Q13029 1718 aa7.71□□□□□ -1.18
CDR2-203ENST00000563573 PRKCSHP14314 528 aaPredicted RBP7.7□□□□□ -1.18
CDR2-203ENST00000563573 PTSQ03393 145 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms