RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 KCNH5Q8NCM2 988 aa26.82■■□□□ 1.88
NME3-204ENST00000563498 CDCA7Q9BWT1 371 aaPredicted RBP26.82■■□□□ 1.88
NME3-204ENST00000563498 AXIN2Q9Y2T1 843 aa26.82■■□□□ 1.88
NME3-204ENST00000563498 WNK3Q9BYP7 1800 aa26.81■■□□□ 1.88
NME3-204ENST00000563498 ARHGEF25Q86VW2 580 aa26.81■■□□□ 1.88
NME3-204ENST00000563498 TTC21BQ7Z4L5 1316 aa26.81■■□□□ 1.88
NME3-204ENST00000563498 AKAP12Q02952 1782 aa26.81■■□□□ 1.88
NME3-204ENST00000563498 BCL9O00512 1426 aa26.81■■□□□ 1.88
NME3-204ENST00000563498 TTC21AQ8NDW8 1320 aa26.8■■□□□ 1.88
NME3-204ENST00000563498 BCL11BQ9C0K0 894 aaPredicted RBP26.79■■□□□ 1.88
NME3-204ENST00000563498 SPON1Q9HCB6 807 aa26.79■■□□□ 1.88
NME3-204ENST00000563498 ROCK2O75116 1388 aaKnown RBP26.79■■□□□ 1.88
NME3-204ENST00000563498 KCNQ2O43526 872 aa26.77■■□□□ 1.88
NME3-204ENST00000563498 CARD10Q9BWT7 1032 aa26.76■■□□□ 1.87
NME3-204ENST00000563498 MARCH10Q8NA82 808 aaPredicted RBP26.75■■□□□ 1.87
NME3-204ENST00000563498 NFAT5O94916 1531 aa26.75■■□□□ 1.87
NME3-204ENST00000563498 ABCC6O95255 1503 aa26.75■■□□□ 1.87
NME3-204ENST00000563498 SIN3AQ96ST3 1273 aa26.74■■□□□ 1.87
NME3-204ENST00000563498 PPP1R1BQ9UD71 204 aaPredicted RBP26.73■■□□□ 1.87
NME3-204ENST00000563498 NINLQ9Y2I6 1382 aa26.72■■□□□ 1.87
NME3-204ENST00000563498 RGPD5Q99666 1765 aa26.72■■□□□ 1.87
NME3-204ENST00000563498 KTN1Q86UP2 1357 aaKnown RBP26.71■■□□□ 1.87
NME3-204ENST00000563498 CSB-PGBD3P0DP91 1061 aa26.71■■□□□ 1.87
NME3-204ENST00000563498 PTF1AQ7RTS3 328 aa26.71■■□□□ 1.87
NME3-204ENST00000563498 CCDC7Q96M83 1385 aa26.71■■□□□ 1.87
NME3-204ENST00000563498 SBNO2Q9Y2G9 1366 aa26.71■■□□□ 1.87
NME3-204ENST00000563498 MON2Q7Z3U7 1717 aa26.7■■□□□ 1.86
NME3-204ENST00000563498 CASZ1Q86V15 1759 aa26.69■■□□□ 1.86
NME3-204ENST00000563498 SOX12O15370 315 aa26.69■■□□□ 1.86
NME3-204ENST00000563498 ANO8Q9HCE9 1232 aaPredicted RBP26.69■■□□□ 1.86
NME3-204ENST00000563498 PROM2Q8N271 834 aa26.68■■□□□ 1.86
NME3-204ENST00000563498 EXOC5O00471 708 aa26.67■■□□□ 1.86
NME3-204ENST00000563498 NEUROD1Q13562 356 aa26.67■■□□□ 1.86
NME3-204ENST00000563498 USP31Q70CQ4 1352 aa26.67■■□□□ 1.86
NME3-204ENST00000563498 USP54Q70EL1 1684 aa26.66■■□□□ 1.86
NME3-204ENST00000563498 TNS2Q63HR2 1409 aa26.65■■□□□ 1.86
NME3-204ENST00000563498 YY1P25490 414 aa26.64■■□□□ 1.86
NME3-204ENST00000563498 DCAF8L1A6NGE4 600 aa26.63■■□□□ 1.85
NME3-204ENST00000563498 TXNRD1Q16881 649 aa26.62■■□□□ 1.85
NME3-204ENST00000563498 ERBB3P21860 1342 aa26.61■■□□□ 1.85
NME3-204ENST00000563498 CD163L1Q9NR16 1453 aa26.61■■□□□ 1.85
NME3-204ENST00000563498 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.6■■□□□ 1.85
NME3-204ENST00000563498 NHSQ6T4R5 1651 aa26.59■■□□□ 1.85
NME3-204ENST00000563498 PDGFDQ9GZP0 370 aaPredicted RBP26.58■■□□□ 1.85
NME3-204ENST00000563498 STK32BQ9NY57 414 aa26.58■■□□□ 1.85
NME3-204ENST00000563498 SLC15A2Q16348 729 aa26.56■■□□□ 1.84
NME3-204ENST00000563498 NME9Q86XW9 330 aa26.56■■□□□ 1.84
NME3-204ENST00000563498 CARD11Q9BXL7 1154 aa26.56■■□□□ 1.84
NME3-204ENST00000563498 LTN1O94822 1766 aa26.56■■□□□ 1.84
NME3-204ENST00000563498 ZBTB7AO95365 584 aa26.55■■□□□ 1.84
NME3-204ENST00000563498 PTGER2P43116 358 aa26.55■■□□□ 1.84
NME3-204ENST00000563498 HDGFL2Q7Z4V5 671 aaPredicted RBP26.55■■□□□ 1.84
NME3-204ENST00000563498 NLRP2Q9NX02 1062 aa26.55■■□□□ 1.84
NME3-204ENST00000563498 EDC4Q6P2E9 1401 aaKnown RBP26.55■■□□□ 1.84
NME3-204ENST00000563498 IL2RBP14784 551 aa26.54■■□□□ 1.84
NME3-204ENST00000563498 TMC1Q8TDI8 760 aa26.53■■□□□ 1.84
NME3-204ENST00000563498 MYOM1P52179 1685 aa26.53■■□□□ 1.84
NME3-204ENST00000563498 PUS7Q96PZ0 661 aaKnown RBP26.52■■□□□ 1.84
NME3-204ENST00000563498 SLC12A5Q9H2X9 1139 aa26.51■■□□□ 1.83
NME3-204ENST00000563498 TERF2IPQ9NYB0 399 aa26.51■■□□□ 1.83
NME3-204ENST00000563498 ANKRD24Q8TF21 1146 aa26.5■■□□□ 1.83
NME3-204ENST00000563498 MTFR1LQ9H019 292 aa26.5■■□□□ 1.83
NME3-204ENST00000563498 ATF5Q9Y2D1 282 aaPredicted RBP26.49■■□□□ 1.83
NME3-204ENST00000563498 A0A1W2PP64 1363 aa26.48■■□□□ 1.83
NME3-204ENST00000563498 PAPPAQ13219 1627 aa26.48■■□□□ 1.83
NME3-204ENST00000563498 ACSBG1Q96GR2 724 aa26.48■■□□□ 1.83
NME3-204ENST00000563498 SGIP1Q9BQI5 828 aa26.46■■□□□ 1.83
NME3-204ENST00000563498 BTAF1O14981 1849 aa26.46■■□□□ 1.83
NME3-204ENST00000563498 FAM208AQ9UK61 1670 aaKnown RBP26.44■■□□□ 1.82
NME3-204ENST00000563498 IP6K1Q92551 441 aa26.43■■□□□ 1.82
NME3-204ENST00000563498 SYT17Q9BSW7 474 aa26.43■■□□□ 1.82
NME3-204ENST00000563498 FHDC1Q9C0D6 1143 aaPredicted RBP26.43■■□□□ 1.82
NME3-204ENST00000563498 TONSLQ96HA7 1378 aa26.42■■□□□ 1.82
NME3-204ENST00000563498 MAP3K5Q99683 1374 aa26.37■■□□□ 1.81
NME3-204ENST00000563498 SLC24A1O60721 1099 aa26.37■■□□□ 1.81
NME3-204ENST00000563498 ARXQ96QS3 562 aa26.37■■□□□ 1.81
NME3-204ENST00000563498 TESK2Q96S53 571 aa26.37■■□□□ 1.81
NME3-204ENST00000563498 LRRC4BQ9NT99 713 aa26.37■■□□□ 1.81
NME3-204ENST00000563498 ZNF827Q17R98 1081 aa26.36■■□□□ 1.81
NME3-204ENST00000563498 SLC27A3Q5K4L6 730 aa26.36■■□□□ 1.81
NME3-204ENST00000563498 COG3Q96JB2 828 aa26.35■■□□□ 1.81
NME3-204ENST00000563498 DDX54Q8TDD1 881 aaKnown RBP26.34■■□□□ 1.81
NME3-204ENST00000563498 QSER1Q2KHR3 1735 aa26.34■■□□□ 1.81
NME3-204ENST00000563498 AKT1S1Q96B36 256 aa26.33■■□□□ 1.81
NME3-204ENST00000563498 LTV1Q96GA3 475 aaPredicted RBP26.33■■□□□ 1.81
NME3-204ENST00000563498 MAP3K19Q56UN5 1328 aa26.33■■□□□ 1.81
NME3-204ENST00000563498 KAT6BQ8WYB5 2073 aa26.32■■□□□ 1.8
NME3-204ENST00000563498 HOXC9P31274 260 aa26.32■■□□□ 1.8
NME3-204ENST00000563498 SLC16A10Q8TF71 515 aa26.32■■□□□ 1.8
NME3-204ENST00000563498 ANKRD36BQ8N2N9 1353 aa26.32■■□□□ 1.8
NME3-204ENST00000563498 ST20-MTHFSA0A0A6YYL1 179 aa26.31■■□□□ 1.8
NME3-204ENST00000563498 AMPHP49418 695 aa26.29■■□□□ 1.8
NME3-204ENST00000563498 ZNF784Q8NCA9 323 aaPredicted RBP26.29■■□□□ 1.8
NME3-204ENST00000563498 RTL1A6NKG5 1358 aa26.29■■□□□ 1.8
NME3-204ENST00000563498 UTRNP46939 3433 aa26.29■■□□□ 1.8
NME3-204ENST00000563498 COL24A1Q17RW2 1714 aa26.27■■□□□ 1.8
NME3-204ENST00000563498 DOT1LQ8TEK3 1739 aa26.27■■□□□ 1.8
NME3-204ENST00000563498 CHD4Q14839 1912 aa26.26■■□□□ 1.79
NME3-204ENST00000563498 SHANK3Q9BYB0 1731 aa26.26■■□□□ 1.79
NME3-204ENST00000563498 PRIM1P49642 420 aaKnown RBP26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms