RNA–Protein interactions for RNA: ENST00000563494.5

GGA2-205, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 5

Gene GGA2, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-205ENST00000563494 ST20-MTHFSA0A0A6YYL1 179 aa29.79■■■□□ 2.36
GGA2-205ENST00000563494 TRIM37O94972 964 aa29.79■■■□□ 2.36
GGA2-205ENST00000563494 PDE3BQ13370 1112 aa29.78■■■□□ 2.36
GGA2-205ENST00000563494 ABCC6O95255 1503 aa29.77■■■□□ 2.36
GGA2-205ENST00000563494 WNK3Q9BYP7 1800 aa29.76■■■□□ 2.35
GGA2-205ENST00000563494 ZBTB7CA1YPR0 619 aa29.76■■■□□ 2.35
GGA2-205ENST00000563494 NME9Q86XW9 330 aa29.76■■■□□ 2.35
GGA2-205ENST00000563494 A0A1W2PP64 1363 aa29.76■■■□□ 2.35
GGA2-205ENST00000563494 LRRC37A3O60309 1634 aa29.75■■■□□ 2.35
GGA2-205ENST00000563494 EZH2Q15910 746 aaKnown RBP29.75■■■□□ 2.35
GGA2-205ENST00000563494 EDC4Q6P2E9 1401 aaKnown RBP29.75■■■□□ 2.35
GGA2-205ENST00000563494 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.75■■■□□ 2.35
GGA2-205ENST00000563494 TOM1L2Q6ZVM7 507 aa29.73■■■□□ 2.35
GGA2-205ENST00000563494 TMC1Q8TDI8 760 aa29.73■■■□□ 2.35
GGA2-205ENST00000563494 SOX12O15370 315 aa29.71■■■□□ 2.35
GGA2-205ENST00000563494 CARD10Q9BWT7 1032 aa29.71■■■□□ 2.35
GGA2-205ENST00000563494 HDGFL2Q7Z4V5 671 aaPredicted RBP29.7■■■□□ 2.35
GGA2-205ENST00000563494 SBF2Q86WG5 1849 aa29.7■■■□□ 2.34
GGA2-205ENST00000563494 OVOS2A0A0J9YW53 1432 aa29.7■■■□□ 2.34
GGA2-205ENST00000563494 OVOS2Q6IE36 1432 aa29.7■■■□□ 2.34
GGA2-205ENST00000563494 RREB1Q92766 1687 aa29.69■■■□□ 2.34
GGA2-205ENST00000563494 TERF2IPQ9NYB0 399 aa29.69■■■□□ 2.34
GGA2-205ENST00000563494 PARD3Q8TEW0 1356 aa29.68■■■□□ 2.34
GGA2-205ENST00000563494 NINLQ9Y2I6 1382 aa29.68■■■□□ 2.34
GGA2-205ENST00000563494 APBA3O96018 575 aa29.68■■■□□ 2.34
GGA2-205ENST00000563494 LRP5O75197 1615 aa29.67■■■□□ 2.34
GGA2-205ENST00000563494 LTN1O94822 1766 aa29.67■■■□□ 2.34
GGA2-205ENST00000563494 PSDA5PKW4 1024 aaPredicted RBP29.67■■■□□ 2.34
GGA2-205ENST00000563494 BCL9O00512 1426 aa29.66■■■□□ 2.34
GGA2-205ENST00000563494 C11orf95C9JLR9 678 aaPredicted RBP29.66■■■□□ 2.34
GGA2-205ENST00000563494 SLC24A1O60721 1099 aa29.66■■■□□ 2.34
GGA2-205ENST00000563494 DDB1Q16531 1140 aa29.66■■■□□ 2.34
GGA2-205ENST00000563494 OVOS2A0A0G2JMS6 1433 aa29.65■■■□□ 2.34
GGA2-205ENST00000563494 CDCA7Q9BWT1 371 aaPredicted RBP29.65■■■□□ 2.34
GGA2-205ENST00000563494 MARCH10Q8NA82 808 aaPredicted RBP29.64■■■□□ 2.34
GGA2-205ENST00000563494 ERBB3P21860 1342 aa29.63■■■□□ 2.33
GGA2-205ENST00000563494 NUP188Q5SRE5 1749 aa29.62■■■□□ 2.33
GGA2-205ENST00000563494 TIMELESSQ9UNS1 1208 aa29.62■■■□□ 2.33
GGA2-205ENST00000563494 USP47Q96K76 1375 aa29.62■■■□□ 2.33
GGA2-205ENST00000563494 CCDC7Q96M83 1385 aa29.61■■■□□ 2.33
GGA2-205ENST00000563494 PTF1AQ7RTS3 328 aa29.6■■■□□ 2.33
GGA2-205ENST00000563494 R3HDM1Q15032 1099 aaKnown RBP29.59■■■□□ 2.33
GGA2-205ENST00000563494 CLSPNQ9HAW4 1339 aa29.59■■■□□ 2.33
GGA2-205ENST00000563494 RGPD3A6NKT7 1758 aaPredicted RBP29.58■■■□□ 2.33
GGA2-205ENST00000563494 CSB-PGBD3P0DP91 1061 aa29.58■■■□□ 2.33
GGA2-205ENST00000563494 RGPD4Q7Z3J3 1758 aa29.58■■■□□ 2.33
GGA2-205ENST00000563494 ANKRD36BQ8N2N9 1353 aa29.57■■■□□ 2.32
GGA2-205ENST00000563494 PLSCR1O15162 318 aa29.56■■■□□ 2.32
GGA2-205ENST00000563494 BCL11BQ9C0K0 894 aaPredicted RBP29.54■■■□□ 2.32
GGA2-205ENST00000563494 TMF1P82094 1093 aa29.53■■■□□ 2.32
GGA2-205ENST00000563494 IP6K1Q92551 441 aa29.53■■■□□ 2.32
GGA2-205ENST00000563494 EXOC5O00471 708 aa29.52■■■□□ 2.32
GGA2-205ENST00000563494 ANKRD24Q8TF21 1146 aa29.52■■■□□ 2.32
GGA2-205ENST00000563494 TNS2Q63HR2 1409 aa29.52■■■□□ 2.32
GGA2-205ENST00000563494 FBLN1P23142 703 aa29.51■■■□□ 2.31
GGA2-205ENST00000563494 PROM2Q8N271 834 aa29.51■■■□□ 2.31
GGA2-205ENST00000563494 FYB1O15117 783 aa29.5■■■□□ 2.31
GGA2-205ENST00000563494 MAP3K19Q56UN5 1328 aa29.48■■■□□ 2.31
GGA2-205ENST00000563494 NLRP2Q9NX02 1062 aa29.48■■■□□ 2.31
GGA2-205ENST00000563494 COG3Q96JB2 828 aa29.47■■■□□ 2.31
GGA2-205ENST00000563494 MYOM1P52179 1685 aa29.46■■■□□ 2.31
GGA2-205ENST00000563494 IL2RBP14784 551 aa29.45■■■□□ 2.31
GGA2-205ENST00000563494 FAM208AQ9UK61 1670 aaKnown RBP29.44■■■□□ 2.3
GGA2-205ENST00000563494 PCGF6Q9BYE7 350 aa29.44■■■□□ 2.3
GGA2-205ENST00000563494 HOXC9P31274 260 aa29.43■■■□□ 2.3
GGA2-205ENST00000563494 CARD14Q9BXL6 1004 aa29.43■■■□□ 2.3
GGA2-205ENST00000563494 KCNQ2O43526 872 aa29.42■■■□□ 2.3
GGA2-205ENST00000563494 NHSQ6T4R5 1651 aa29.41■■■□□ 2.3
GGA2-205ENST00000563494 NBPF14Q5TI25 921 aa29.41■■■□□ 2.3
GGA2-205ENST00000563494 CDCA8Q53HL2 280 aa29.4■■■□□ 2.3
GGA2-205ENST00000563494 GGNBP2Q9H3C7 697 aa29.4■■■□□ 2.3
GGA2-205ENST00000563494 RGPD2P0DJD1 1756 aa29.39■■■□□ 2.3
GGA2-205ENST00000563494 ANO8Q9HCE9 1232 aaPredicted RBP29.38■■■□□ 2.29
GGA2-205ENST00000563494 RTL1A6NKG5 1358 aa29.36■■■□□ 2.29
GGA2-205ENST00000563494 KIF20BQ96Q89 1820 aa29.36■■■□□ 2.29
GGA2-205ENST00000563494 RRS1Q15050 365 aaKnown RBP29.35■■■□□ 2.29
GGA2-205ENST00000563494 TXNRD1Q16881 649 aa29.34■■■□□ 2.29
GGA2-205ENST00000563494 LTV1Q96GA3 475 aaPredicted RBP29.34■■■□□ 2.29
GGA2-205ENST00000563494 AMPHP49418 695 aa29.33■■■□□ 2.29
GGA2-205ENST00000563494 SHANK3Q9BYB0 1731 aa29.33■■■□□ 2.29
GGA2-205ENST00000563494 CASZ1Q86V15 1759 aa29.33■■■□□ 2.29
GGA2-205ENST00000563494 NBPF6Q5VWK0 638 aa29.3■■■□□ 2.28
GGA2-205ENST00000563494 ACSBG1Q96GR2 724 aa29.3■■■□□ 2.28
GGA2-205ENST00000563494 NBPF4Q96M43 638 aa29.3■■■□□ 2.28
GGA2-205ENST00000563494 BTAF1O14981 1849 aa29.29■■■□□ 2.28
GGA2-205ENST00000563494 KIF24Q5T7B8 1368 aa29.28■■■□□ 2.28
GGA2-205ENST00000563494 PDGFDQ9GZP0 370 aaPredicted RBP29.28■■■□□ 2.28
GGA2-205ENST00000563494 MEGF6O75095 1541 aa29.28■■■□□ 2.28
GGA2-205ENST00000563494 NSD3Q9BZ95 1437 aa29.27■■■□□ 2.28
GGA2-205ENST00000563494 INSRP06213 1382 aa29.26■■■□□ 2.28
GGA2-205ENST00000563494 HSP90AB2PQ58FF8 381 aa29.26■■■□□ 2.27
GGA2-205ENST00000563494 PAPPAQ13219 1627 aa29.26■■■□□ 2.27
GGA2-205ENST00000563494 ANKRD26Q9UPS8 1709 aa29.23■■■□□ 2.27
GGA2-205ENST00000563494 DDX54Q8TDD1 881 aaKnown RBP29.23■■■□□ 2.27
GGA2-205ENST00000563494 SPON1Q9HCB6 807 aa29.23■■■□□ 2.27
GGA2-205ENST00000563494 SLC15A2Q16348 729 aa29.22■■■□□ 2.27
GGA2-205ENST00000563494 FLT4P35916 1363 aa29.22■■■□□ 2.27
GGA2-205ENST00000563494 ZCRB1Q8TBF4 217 aaKnown RBP29.21■■■□□ 2.27
GGA2-205ENST00000563494 LRRC4BQ9NT99 713 aa29.2■■■□□ 2.26
GGA2-205ENST00000563494 NSD2O96028 1365 aa29.2■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms