RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 THSD7AQ9UPZ6 1657 aa39.41■■■■□ 3.9
NME3-203ENST00000563367 LTN1O94822 1766 aa39.41■■■■□ 3.9
NME3-203ENST00000563367 A0A0G2JS52 829 aa39.4■■■■□ 3.9
NME3-203ENST00000563367 MYT1Q01538 1121 aa39.4■■■■□ 3.9
NME3-203ENST00000563367 USP35Q9P2H5 1018 aa39.39■■■■□ 3.9
NME3-203ENST00000563367 KRT27Q7Z3Y8 459 aa39.35■■■■□ 3.89
NME3-203ENST00000563367 POLR3GLQ9BT43 218 aa39.33■■■■□ 3.89
NME3-203ENST00000563367 CARD14Q9BXL6 1004 aa39.33■■■■□ 3.89
NME3-203ENST00000563367 KIF20BQ96Q89 1820 aa39.33■■■■□ 3.89
NME3-203ENST00000563367 CRB1P82279 1406 aa39.31■■■■□ 3.88
NME3-203ENST00000563367 ABCC6O95255 1503 aa39.31■■■■□ 3.88
NME3-203ENST00000563367 FYB1O15117 783 aa39.31■■■■□ 3.88
NME3-203ENST00000563367 BARGINQ6ZT62 677 aa39.31■■■■□ 3.88
NME3-203ENST00000563367 TCP11L2Q8N4U5 519 aa39.3■■■■□ 3.88
NME3-203ENST00000563367 COG3Q96JB2 828 aa39.3■■■■□ 3.88
NME3-203ENST00000563367 C11orf95C9JLR9 678 aaPredicted RBP39.27■■■■□ 3.88
NME3-203ENST00000563367 WDR17Q8IZU2 1322 aa39.27■■■■□ 3.88
NME3-203ENST00000563367 GGNBP2Q9H3C7 697 aa39.27■■■■□ 3.88
NME3-203ENST00000563367 NSD3Q9BZ95 1437 aa39.25■■■■□ 3.87
NME3-203ENST00000563367 TOM1L2Q6ZVM7 507 aa39.25■■■■□ 3.87
NME3-203ENST00000563367 THRAP3Q9Y2W1 955 aaKnown RBP39.25■■■■□ 3.87
NME3-203ENST00000563367 FBLN1P23142 703 aa39.23■■■■□ 3.87
NME3-203ENST00000563367 FAM182BQ5T319 152 aa39.21■■■■□ 3.87
NME3-203ENST00000563367 WNK3Q9BYP7 1800 aa39.21■■■■□ 3.87
NME3-203ENST00000563367 PARP4Q9UKK3 1724 aaKnown RBP39.2■■■■□ 3.87
NME3-203ENST00000563367 CSB-PGBD3P0DP91 1061 aa39.19■■■■□ 3.86
NME3-203ENST00000563367 CCDC125Q86Z20 511 aa39.17■■■■□ 3.86
NME3-203ENST00000563367 MAP3K19Q56UN5 1328 aa39.15■■■■□ 3.86
NME3-203ENST00000563367 CARD10Q9BWT7 1032 aa39.15■■■■□ 3.86
NME3-203ENST00000563367 BLMP54132 1417 aaPredicted RBP39.14■■■■□ 3.86
NME3-203ENST00000563367 IP6K1Q92551 441 aa39.14■■■■□ 3.86
NME3-203ENST00000563367 ERBB3P21860 1342 aa39.14■■■■□ 3.86
NME3-203ENST00000563367 ANKRD24Q8TF21 1146 aa39.11■■■■□ 3.85
NME3-203ENST00000563367 PANK3Q9H999 370 aa39.1■■■■□ 3.85
NME3-203ENST00000563367 LRRC37A3O60309 1634 aa39.1■■■■□ 3.85
NME3-203ENST00000563367 RRS1Q15050 365 aaKnown RBP39.09■■■■□ 3.85
NME3-203ENST00000563367 PDE3BQ13370 1112 aa39.08■■■■□ 3.85
NME3-203ENST00000563367 HOXC9P31274 260 aa39.07■■■■□ 3.85
NME3-203ENST00000563367 CGNL1Q0VF96 1302 aa39.07■■■■□ 3.84
NME3-203ENST00000563367 KIF7Q2M1P5 1343 aa39.07■■■■□ 3.84
NME3-203ENST00000563367 AMPHP49418 695 aa39.06■■■■□ 3.84
NME3-203ENST00000563367 CCDC7Q96M83 1385 aa39.06■■■■□ 3.84
NME3-203ENST00000563367 NLRP2Q9NX02 1062 aa39.05■■■■□ 3.84
NME3-203ENST00000563367 DISP2A7MBM2 1401 aa39.05■■■■□ 3.84
NME3-203ENST00000563367 RGPD1P0DJD0 1748 aa39.03■■■■□ 3.84
NME3-203ENST00000563367 ANKRD26Q9UPS8 1709 aa39.03■■■■□ 3.84
NME3-203ENST00000563367 RGPD2P0DJD1 1756 aa39.03■■■■□ 3.84
NME3-203ENST00000563367 LTV1Q96GA3 475 aaPredicted RBP39.03■■■■□ 3.84
NME3-203ENST00000563367 FAM208AQ9UK61 1670 aaKnown RBP39.03■■■■□ 3.84
NME3-203ENST00000563367 PEAK1Q9H792 1746 aa39.03■■■■□ 3.84
NME3-203ENST00000563367 FAM196AQ6ZSG2 479 aa39.02■■■■□ 3.84
NME3-203ENST00000563367 CDCA7Q9BWT1 371 aaPredicted RBP39.01■■■■□ 3.84
NME3-203ENST00000563367 SF3B2Q13435 895 aaKnown RBP39■■■■□ 3.83
NME3-203ENST00000563367 DDB1Q16531 1140 aa39■■■■□ 3.83
NME3-203ENST00000563367 DEFB132Q7Z7B7 95 aa39■■■■□ 3.83
NME3-203ENST00000563367 MAP2P11137 1827 aaKnown RBP39■■■■□ 3.83
NME3-203ENST00000563367 TNS1Q9HBL0 1735 aaKnown RBP39■■■■□ 3.83
NME3-203ENST00000563367 RTL1A6NKG5 1358 aa38.99■■■■□ 3.83
NME3-203ENST00000563367 TRIM37O94972 964 aa38.93■■■■□ 3.82
NME3-203ENST00000563367 SBF2Q86WG5 1849 aa38.92■■■■□ 3.82
NME3-203ENST00000563367 EMILIN1Q9Y6C2 1016 aa38.92■■■■□ 3.82
NME3-203ENST00000563367 HSP90AB2PQ58FF8 381 aa38.91■■■■□ 3.82
NME3-203ENST00000563367 MARCH10Q8NA82 808 aaPredicted RBP38.9■■■■□ 3.82
NME3-203ENST00000563367 IL2RBP14784 551 aa38.89■■■■□ 3.82
NME3-203ENST00000563367 FLT4P35916 1363 aa38.89■■■■□ 3.82
NME3-203ENST00000563367 KIF24Q5T7B8 1368 aa38.89■■■■□ 3.82
NME3-203ENST00000563367 OVOS2A0A0G2JMS6 1433 aa38.89■■■■□ 3.82
NME3-203ENST00000563367 INSRP06213 1382 aa38.88■■■■□ 3.81
NME3-203ENST00000563367 EXOC5O00471 708 aa38.88■■■■□ 3.81
NME3-203ENST00000563367 BAG6P46379 1132 aa38.86■■■■□ 3.81
NME3-203ENST00000563367 TNS2Q63HR2 1409 aa38.86■■■■□ 3.81
NME3-203ENST00000563367 WASHC2AQ641Q2 1341 aa38.86■■■■□ 3.81
NME3-203ENST00000563367 TNNT2P45379 298 aaPredicted RBP38.85■■■■□ 3.81
NME3-203ENST00000563367 KNSTRNQ9Y448 316 aa38.84■■■■□ 3.81
NME3-203ENST00000563367 NSD2O96028 1365 aa38.83■■■■□ 3.81
NME3-203ENST00000563367 EN1Q05925 392 aaPredicted RBP38.83■■■■□ 3.81
NME3-203ENST00000563367 NBPF6Q5VWK0 638 aa38.83■■■■□ 3.81
NME3-203ENST00000563367 NBPF4Q96M43 638 aa38.83■■■■□ 3.81
NME3-203ENST00000563367 POLKQ9UBT6 870 aa38.83■■■■□ 3.81
NME3-203ENST00000563367 PPM1GO15355 546 aaPredicted RBP38.82■■■■□ 3.8
NME3-203ENST00000563367 SMG6Q86US8 1419 aaKnown RBP38.8■■■■□ 3.8
NME3-203ENST00000563367 USHBP1Q8N6Y0 703 aa38.78■■■■□ 3.8
NME3-203ENST00000563367 APBA3O96018 575 aa38.77■■■■□ 3.8
NME3-203ENST00000563367 AMER1Q5JTC6 1135 aaPredicted RBP38.77■■■■□ 3.8
NME3-203ENST00000563367 BCL9O00512 1426 aa38.77■■■■□ 3.8
NME3-203ENST00000563367 PER1O15534 1290 aaPredicted RBP38.76■■■■□ 3.8
NME3-203ENST00000563367 MORC1Q86VD1 984 aa38.74■■■■□ 3.79
NME3-203ENST00000563367 MEGF6O75095 1541 aa38.73■■■■□ 3.79
NME3-203ENST00000563367 PTF1AQ7RTS3 328 aa38.73■■■■□ 3.79
NME3-203ENST00000563367 SHANK3Q9BYB0 1731 aa38.72■■■■□ 3.79
NME3-203ENST00000563367 EZH2Q15910 746 aaKnown RBP38.72■■■■□ 3.79
NME3-203ENST00000563367 CAMKK2Q96RR4 588 aa38.72■■■■□ 3.79
NME3-203ENST00000563367 KAT6BQ8WYB5 2073 aa38.71■■■■□ 3.79
NME3-203ENST00000563367 BCL11BQ9C0K0 894 aaPredicted RBP38.67■■■■□ 3.78
NME3-203ENST00000563367 DDX54Q8TDD1 881 aaKnown RBP38.65■■■■□ 3.78
NME3-203ENST00000563367 RREB1Q92766 1687 aa38.65■■■■□ 3.78
NME3-203ENST00000563367 NHSQ6T4R5 1651 aa38.63■■■■□ 3.77
NME3-203ENST00000563367 NCAPD2Q15021 1401 aa38.63■■■■□ 3.77
NME3-203ENST00000563367 ZCRB1Q8TBF4 217 aaKnown RBP38.62■■■■□ 3.77
NME3-203ENST00000563367 RAPGEF4Q8WZA2 1011 aa38.62■■■■□ 3.77
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms