RNA–Protein interactions for RNA: ENST00000563283.1

CNOT1-205, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-205ENST00000563283 SNAPC4Q5SXM2 1469 aa8.77□□□□□ -1
CNOT1-205ENST00000563283 POTECB2RU33 542 aa8.77□□□□□ -1.01
CNOT1-205ENST00000563283 NBPF14Q5TI25 921 aa8.77□□□□□ -1.01
CNOT1-205ENST00000563283 FAM174AQ8TBP5 190 aa8.77□□□□□ -1.01
CNOT1-205ENST00000563283 ATP1B4Q9UN42 357 aaPredicted RBP8.77□□□□□ -1.01
CNOT1-205ENST00000563283 WASF2Q9Y6W5 498 aa8.77□□□□□ -1.01
CNOT1-205ENST00000563283 GRIN2BQ13224 1484 aa8.77□□□□□ -1.01
CNOT1-205ENST00000563283 C4orf48Q5BLP8 95 aa8.76□□□□□ -1.01
CNOT1-205ENST00000563283 BPHLQ86WA6 291 aaPredicted RBP8.76□□□□□ -1.01
CNOT1-205ENST00000563283 LRRN4Q8WUT4 740 aa8.76□□□□□ -1.01
CNOT1-205ENST00000563283 GPKOWQ92917 476 aaPredicted RBP eCLIP8.75□□□□□ -1.012e-6■■■■□ 20.4
CNOT1-205ENST00000563283 PCMTD1Q96MG8 357 aaPredicted RBP8.75□□□□□ -1.01
CNOT1-205ENST00000563283 AP1G2O75843 785 aa8.74□□□□□ -1.01
CNOT1-205ENST00000563283 SH3BP5LQ7L8J4 393 aa8.74□□□□□ -1.01
CNOT1-205ENST00000563283 SH3RF1Q7Z6J0 888 aa8.74□□□□□ -1.01
CNOT1-205ENST00000563283 IL27Q8NEV9 243 aa8.74□□□□□ -1.01
CNOT1-205ENST00000563283 MAGI1Q96QZ7 1491 aaPredicted RBP8.74□□□□□ -1.01
CNOT1-205ENST00000563283 RFC5P40937 340 aa8.73□□□□□ -1.01
CNOT1-205ENST00000563283 AGERQ15109 404 aa8.73□□□□□ -1.01
CNOT1-205ENST00000563283 CDK15Q96Q40 435 aa8.73□□□□□ -1.01
CNOT1-205ENST00000563283 C1QTNF2Q9BXJ5 285 aa8.73□□□□□ -1.01
CNOT1-205ENST00000563283 ATP13A2Q9NQ11 1180 aa8.73□□□□□ -1.01
CNOT1-205ENST00000563283 GMPR2Q9P2T1 348 aaKnown RBP8.73□□□□□ -1.01
CNOT1-205ENST00000563283 SYNJ2O15056 1496 aa8.72□□□□□ -1.01
CNOT1-205ENST00000563283 RUSC2Q8N2Y8 1516 aa8.72□□□□□ -1.01
CNOT1-205ENST00000563283 ADAMTS12P58397 1594 aa8.71□□□□□ -1.02
CNOT1-205ENST00000563283 ADH1CP00326 375 aa8.71□□□□□ -1.02
CNOT1-205ENST00000563283 USP17L8P0C7I0 530 aa8.71□□□□□ -1.02
CNOT1-205ENST00000563283 NNTQ13423 1086 aa8.71□□□□□ -1.02
CNOT1-205ENST00000563283 NR6A1Q15406 480 aa8.71□□□□□ -1.02
CNOT1-205ENST00000563283 FKBPLQ9UIM3 349 aa8.71□□□□□ -1.02
CNOT1-205ENST00000563283 ZC3H4Q9UPT8 1303 aaKnown RBP8.71□□□□□ -1.02
CNOT1-205ENST00000563283 IGF1RP08069 1367 aa8.71□□□□□ -1.02
CNOT1-205ENST00000563283 ERICH3Q5RHP9 1530 aa8.7□□□□□ -1.02
CNOT1-205ENST00000563283 CLASP1Q7Z460 1538 aa8.7□□□□□ -1.02
CNOT1-205ENST00000563283 TRMT44Q8IYL2 757 aaKnown RBP8.7□□□□□ -1.02
CNOT1-205ENST00000563283 PDXDC2PQ6P474 469 aa8.69□□□□□ -1.02
CNOT1-205ENST00000563283 CHMP7Q8WUX9 453 aaPredicted RBP8.69□□□□□ -1.02
CNOT1-205ENST00000563283 ZNF775Q96BV0 537 aaPredicted RBP8.69□□□□□ -1.02
CNOT1-205ENST00000563283 RIMBP3CA6NJZ7 1639 aa8.69□□□□□ -1.02
CNOT1-205ENST00000563283 RIMBP3BA6NNM3 1639 aa8.69□□□□□ -1.02
CNOT1-205ENST00000563283 RIMBP3Q9UFD9 1639 aa8.69□□□□□ -1.02
CNOT1-205ENST00000563283 CAPN5O15484 640 aaPredicted RBP8.68□□□□□ -1.02
CNOT1-205ENST00000563283 ARID5BQ14865 1188 aa8.68□□□□□ -1.02
CNOT1-205ENST00000563283 SENP2Q9HC62 589 aa8.68□□□□□ -1.02
CNOT1-205ENST00000563283 HMX1Q9NP08 348 aaPredicted RBP8.68□□□□□ -1.02
CNOT1-205ENST00000563283 MAP4K5Q9Y4K4 846 aa8.68□□□□□ -1.02
CNOT1-205ENST00000563283 GRIN2AQ12879 1464 aa8.68□□□□□ -1.02
CNOT1-205ENST00000563283 CEP170Q5SW79 1584 aa8.68□□□□□ -1.02
CNOT1-205ENST00000563283 MAGEB6P1A0A0J9YX57 407 aa8.67□□□□□ -1.02
CNOT1-205ENST00000563283 FHAD1B1AJZ9 1412 aa8.67□□□□□ -1.02
CNOT1-205ENST00000563283 C11orf95C9JLR9 678 aaPredicted RBP8.67□□□□□ -1.02
CNOT1-205ENST00000563283 NR5A1Q13285 461 aa8.67□□□□□ -1.02
CNOT1-205ENST00000563283 TMEM259Q4ZIN3 620 aa8.67□□□□□ -1.02
CNOT1-205ENST00000563283 TRIM47Q96LD4 638 aa8.67□□□□□ -1.02
CNOT1-205ENST00000563283 TIMP2P16035 220 aa8.66□□□□□ -1.02
CNOT1-205ENST00000563283 GRM5P41594 1212 aa8.66□□□□□ -1.02
CNOT1-205ENST00000563283 ERFEQ4G0M1 354 aa8.66□□□□□ -1.02
CNOT1-205ENST00000563283 EPS8L1Q8TE68 723 aa8.66□□□□□ -1.02
CNOT1-205ENST00000563283 KIFC2Q96AC6 838 aa8.66□□□□□ -1.02
CNOT1-205ENST00000563283 ARHGAP9Q9BRR9 750 aa8.66□□□□□ -1.02
CNOT1-205ENST00000563283 KLF16Q9BXK1 252 aaPredicted RBP8.66□□□□□ -1.02
CNOT1-205ENST00000563283 CARD14Q9BXL6 1004 aa8.66□□□□□ -1.02
CNOT1-205ENST00000563283 ARHGEF11O15085 1522 aa8.65□□□□□ -1.02
CNOT1-205ENST00000563283 NUP160Q12769 1436 aa8.65□□□□□ -1.02
CNOT1-205ENST00000563283 KIF27Q86VH2 1401 aa8.65□□□□□ -1.02
CNOT1-205ENST00000563283 NR3C2P08235 984 aa8.65□□□□□ -1.02
CNOT1-205ENST00000563283 WDR4P57081 412 aaKnown RBP8.65□□□□□ -1.02
CNOT1-205ENST00000563283 TRIM46Q7Z4K8 759 aa8.65□□□□□ -1.02
CNOT1-205ENST00000563283 PNMA1Q8ND90 353 aa8.65□□□□□ -1.02
CNOT1-205ENST00000563283 GPSM3Q9Y4H4 160 aa8.65□□□□□ -1.02
CNOT1-205ENST00000563283 BMP1P13497 986 aa8.64□□□□□ -1.03
CNOT1-205ENST00000563283 VASH1Q7L8A9 365 aaPredicted RBP8.64□□□□□ -1.03
CNOT1-205ENST00000563283 ERCC6L2Q5T890 1561 aa8.64□□□□□ -1.03
CNOT1-205ENST00000563283 SNRPBP14678 240 aaKnown RBP8.63□□□□□ -1.03
CNOT1-205ENST00000563283 FSHRP23945 695 aa8.63□□□□□ -1.03
CNOT1-205ENST00000563283 PTK2Q05397 1052 aa8.63□□□□□ -1.03
CNOT1-205ENST00000563283 OCSTAMPQ9BR26 566 aa8.63□□□□□ -1.03
CNOT1-205ENST00000563283 TRIM34Q9BYJ4 488 aa8.63□□□□□ -1.03
CNOT1-205ENST00000563283 CDV3Q9UKY7 258 aaKnown RBP8.62□□□□□ -1.03
CNOT1-205ENST00000563283 SHROOM2Q13796 1616 aa8.62□□□□□ -1.03
CNOT1-205ENST00000563283 ZIC2O95409 532 aaPredicted RBP8.61□□□□□ -1.03
CNOT1-205ENST00000563283 ZBTB33Q86T24 672 aa8.61□□□□□ -1.03
CNOT1-205ENST00000563283 SLC10A4Q96EP9 437 aa8.61□□□□□ -1.03
CNOT1-205ENST00000563283 ARAP1Q96P48 1450 aa8.61□□□□□ -1.03
CNOT1-205ENST00000563283 CUL7Q14999 1698 aa8.61□□□□□ -1.03
CNOT1-205ENST00000563283 MRPL14Q6P1L8 145 aaKnown RBP8.6□□□□□ -1.03
CNOT1-205ENST00000563283 ITPKCQ96DU7 683 aa8.6□□□□□ -1.03
CNOT1-205ENST00000563283 GJD4Q96KN9 370 aaPredicted RBP8.6□□□□□ -1.03
CNOT1-205ENST00000563283 ZFAND3Q9H8U3 227 aa8.6□□□□□ -1.03
CNOT1-205ENST00000563283 CARMIL1Q5VZK9 1371 aa8.6□□□□□ -1.03
CNOT1-205ENST00000563283 SOCS7O14512 581 aa8.59□□□□□ -1.03
CNOT1-205ENST00000563283 PRKCSHP14314 528 aaPredicted RBP8.59□□□□□ -1.03
CNOT1-205ENST00000563283 CCDC116Q8IYX3 515 aa8.59□□□□□ -1.03
CNOT1-205ENST00000563283 BANK1Q8NDB2 785 aa8.59□□□□□ -1.03
CNOT1-205ENST00000563283 ADAM32Q8TC27 787 aa8.59□□□□□ -1.03
CNOT1-205ENST00000563283 CYB5RLQ6IPT4 315 aa8.58□□□□□ -1.04
CNOT1-205ENST00000563283 ZFP42Q96MM3 310 aa8.58□□□□□ -1.04
CNOT1-205ENST00000563283 EMILIN1Q9Y6C2 1016 aa8.58□□□□□ -1.04
CNOT1-205ENST00000563283 KCTD15Q96SI1 283 aaPredicted RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms