RNA–Protein interactions for RNA: ENST00000563255.1

CDH11-207, Transcript of cadherin 11, humanhuman

TSL 5

Gene CDH11, Length 545 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-207ENST00000563255 ARHGEF10O15013 1369 aa19.95■□□□□ 0.78
CDH11-207ENST00000563255 AATKQ6ZMQ8 1374 aa19.95■□□□□ 0.78
CDH11-207ENST00000563255 PHRF1Q9P1Y6 1649 aaKnown RBP19.94■□□□□ 0.78
CDH11-207ENST00000563255 SLIT3O75094 1523 aa19.94■□□□□ 0.78
CDH11-207ENST00000563255 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.93■□□□□ 0.78
CDH11-207ENST00000563255 FAM83GA6ND36 823 aa19.93■□□□□ 0.78
CDH11-207ENST00000563255 ABCA3Q99758 1704 aa19.93■□□□□ 0.78
CDH11-207ENST00000563255 SF3B2Q13435 895 aaKnown RBP19.9■□□□□ 0.78
CDH11-207ENST00000563255 USP19O94966 1318 aa19.9■□□□□ 0.78
CDH11-207ENST00000563255 BLMP54132 1417 aaPredicted RBP19.9■□□□□ 0.78
CDH11-207ENST00000563255 A0A0G2JS52 829 aa19.89■□□□□ 0.77
CDH11-207ENST00000563255 ONECUT3O60422 494 aaPredicted RBP19.89■□□□□ 0.77
CDH11-207ENST00000563255 NFAT5O94916 1531 aa19.89■□□□□ 0.77
CDH11-207ENST00000563255 TNNT2P45379 298 aaPredicted RBP19.89■□□□□ 0.77
CDH11-207ENST00000563255 MYT1Q01538 1121 aa19.89■□□□□ 0.77
CDH11-207ENST00000563255 NUTM2GQ5VZR2 741 aa19.89■□□□□ 0.77
CDH11-207ENST00000563255 KCNH5Q8NCM2 988 aa19.89■□□□□ 0.77
CDH11-207ENST00000563255 SMG6Q86US8 1419 aaKnown RBP19.88■□□□□ 0.77
CDH11-207ENST00000563255 KRT27Q7Z3Y8 459 aa19.88■□□□□ 0.77
CDH11-207ENST00000563255 PLCH1Q4KWH8 1693 aa19.87■□□□□ 0.77
CDH11-207ENST00000563255 BTG4Q9NY30 223 aa19.87■□□□□ 0.77
CDH11-207ENST00000563255 PSDA5PKW4 1024 aaPredicted RBP19.86■□□□□ 0.77
CDH11-207ENST00000563255 PEAK1Q9H792 1746 aa19.85■□□□□ 0.77
CDH11-207ENST00000563255 MTHFSP49914 203 aa19.85■□□□□ 0.77
CDH11-207ENST00000563255 CCDC184Q52MB2 194 aa19.85■□□□□ 0.77
CDH11-207ENST00000563255 POLKQ9UBT6 870 aa19.85■□□□□ 0.77
CDH11-207ENST00000563255 GCP02774 474 aa19.84■□□□□ 0.77
CDH11-207ENST00000563255 FAM98CQ17RN3 349 aaKnown RBP19.84■□□□□ 0.77
CDH11-207ENST00000563255 MRS2Q9HD23 443 aa19.84■□□□□ 0.77
CDH11-207ENST00000563255 KIF24Q5T7B8 1368 aa19.83■□□□□ 0.77
CDH11-207ENST00000563255 RGPD5Q99666 1765 aa19.83■□□□□ 0.77
CDH11-207ENST00000563255 NWD2Q9ULI1 1742 aa19.83■□□□□ 0.77
CDH11-207ENST00000563255 FBLN1P23142 703 aa19.83■□□□□ 0.77
CDH11-207ENST00000563255 INSRP06213 1382 aa19.83■□□□□ 0.76
CDH11-207ENST00000563255 COL18A1P39060 1754 aa19.81■□□□□ 0.76
CDH11-207ENST00000563255 RRS1Q15050 365 aaKnown RBP19.81■□□□□ 0.76
CDH11-207ENST00000563255 CFAP53Q96M91 514 aa19.81■□□□□ 0.76
CDH11-207ENST00000563255 COL3A1P02461 1466 aaPredicted RBP19.8■□□□□ 0.76
CDH11-207ENST00000563255 EMILIN1Q9Y6C2 1016 aa19.8■□□□□ 0.76
CDH11-207ENST00000563255 MAP3K19Q56UN5 1328 aa19.79■□□□□ 0.76
CDH11-207ENST00000563255 PRDM11Q9NQV5 511 aa19.79■□□□□ 0.76
CDH11-207ENST00000563255 ABCC6O95255 1503 aa19.79■□□□□ 0.76
CDH11-207ENST00000563255 RTL1A6NKG5 1358 aa19.79■□□□□ 0.76
CDH11-207ENST00000563255 SOX12O15370 315 aa19.78■□□□□ 0.76
CDH11-207ENST00000563255 FAM182BQ5T319 152 aa19.78■□□□□ 0.76
CDH11-207ENST00000563255 FLT4P35916 1363 aa19.78■□□□□ 0.76
CDH11-207ENST00000563255 BAG6P46379 1132 aa19.77■□□□□ 0.76
CDH11-207ENST00000563255 ARHGEF25Q86VW2 580 aa19.77■□□□□ 0.76
CDH11-207ENST00000563255 PNISRQ8TF01 805 aaKnown RBP19.77■□□□□ 0.76
CDH11-207ENST00000563255 CPDO75976 1380 aa19.77■□□□□ 0.76
CDH11-207ENST00000563255 SPATA31A5Q5VU36 1347 aa19.76■□□□□ 0.75
CDH11-207ENST00000563255 SPATA31A7Q8IWB4 1347 aa19.76■□□□□ 0.75
CDH11-207ENST00000563255 LRP5O75197 1615 aa19.76■□□□□ 0.75
CDH11-207ENST00000563255 COL14A1Q05707 1796 aaKnown RBP19.75■□□□□ 0.75
CDH11-207ENST00000563255 PPM1GO15355 546 aaPredicted RBP19.75■□□□□ 0.75
CDH11-207ENST00000563255 AMPHP49418 695 aa19.75■□□□□ 0.75
CDH11-207ENST00000563255 RGPD1P0DJD0 1748 aa19.74■□□□□ 0.75
CDH11-207ENST00000563255 CHRNA2Q15822 529 aa19.74■□□□□ 0.75
CDH11-207ENST00000563255 IP6K1Q92551 441 aa19.74■□□□□ 0.75
CDH11-207ENST00000563255 NRAPQ86VF7 1730 aa19.73■□□□□ 0.75
CDH11-207ENST00000563255 LMO7Q8WWI1 1683 aa19.73■□□□□ 0.75
CDH11-207ENST00000563255 FAM208AQ9UK61 1670 aaKnown RBP19.73■□□□□ 0.75
CDH11-207ENST00000563255 DIAPH1O60610 1272 aaKnown RBP19.73■□□□□ 0.75
CDH11-207ENST00000563255 HOXC9P31274 260 aa19.73■□□□□ 0.75
CDH11-207ENST00000563255 ZC3H6P61129 1189 aaKnown RBP19.73■□□□□ 0.75
CDH11-207ENST00000563255 STRN4Q9NRL3 753 aa19.73■□□□□ 0.75
CDH11-207ENST00000563255 RGPD2P0DJD1 1756 aa19.72■□□□□ 0.75
CDH11-207ENST00000563255 KIAA0232Q92628 1395 aa19.72■□□□□ 0.75
CDH11-207ENST00000563255 EN1Q05925 392 aaPredicted RBP19.71■□□□□ 0.75
CDH11-207ENST00000563255 HSP90AB2PQ58FF8 381 aa19.71■□□□□ 0.75
CDH11-207ENST00000563255 NUDCQ9Y266 331 aa19.7■□□□□ 0.74
CDH11-207ENST00000563255 IL13P35225 146 aa19.69■□□□□ 0.74
CDH11-207ENST00000563255 EVA1CP58658 441 aa19.69■□□□□ 0.74
CDH11-207ENST00000563255 WDR43Q15061 677 aaKnown RBP eCLIP19.69■□□□□ 0.74
CDH11-207ENST00000563255 FAM9BQ8IZU0 186 aa19.69■□□□□ 0.74
CDH11-207ENST00000563255 USP35Q9P2H5 1018 aa19.69■□□□□ 0.74
CDH11-207ENST00000563255 SPATA31A1Q5TZJ5 1347 aa19.69■□□□□ 0.74
CDH11-207ENST00000563255 R3HDM1Q15032 1099 aaKnown RBP19.68■□□□□ 0.74
CDH11-207ENST00000563255 EIF4A2Q14240 407 aaKnown RBP19.67■□□□□ 0.74
CDH11-207ENST00000563255 CAMTA1Q9Y6Y1 1673 aa19.67■□□□□ 0.74
CDH11-207ENST00000563255 ZBTB7CA1YPR0 619 aa19.66■□□□□ 0.74
CDH11-207ENST00000563255 ADAMTS8Q9UP79 889 aa19.65■□□□□ 0.74
CDH11-207ENST00000563255 AXIN2Q9Y2T1 843 aa19.65■□□□□ 0.74
CDH11-207ENST00000563255 TRIM37O94972 964 aa19.64■□□□□ 0.73
CDH11-207ENST00000563255 FAM196AQ6ZSG2 479 aa19.64■□□□□ 0.73
CDH11-207ENST00000563255 TNS1Q9HBL0 1735 aaKnown RBP19.64■□□□□ 0.73
CDH11-207ENST00000563255 U2SURPO15042 1029 aaKnown RBP19.62■□□□□ 0.73
CDH11-207ENST00000563255 U2AF1L5P0DN76 240 aaPredicted RBP19.62■□□□□ 0.73
CDH11-207ENST00000563255 U2AF1Q01081 240 aaKnown RBP eCLIP19.62■□□□□ 0.73
CDH11-207ENST00000563255 PDE3BQ13370 1112 aa19.62■□□□□ 0.73
CDH11-207ENST00000563255 EZH2Q15910 746 aaKnown RBP19.62■□□□□ 0.73
CDH11-207ENST00000563255 THSD7AQ9UPZ6 1657 aa19.62■□□□□ 0.73
CDH11-207ENST00000563255 ERBB3P21860 1342 aa19.61■□□□□ 0.73
CDH11-207ENST00000563255 LARP1Q6PKG0 1096 aaKnown RBP19.61■□□□□ 0.73
CDH11-207ENST00000563255 ANKRD24Q8TF21 1146 aa19.61■□□□□ 0.73
CDH11-207ENST00000563255 PNNQ9H307 717 aaKnown RBP19.61■□□□□ 0.73
CDH11-207ENST00000563255 COL5A2P05997 1499 aaPredicted RBP19.6■□□□□ 0.73
CDH11-207ENST00000563255 IGSF1Q8N6C5 1336 aa19.6■□□□□ 0.73
CDH11-207ENST00000563255 FCHSD2O94868 740 aa19.6■□□□□ 0.73
CDH11-207ENST00000563255 APBA3O96018 575 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms