RNA–Protein interactions for RNA: ENST00000563180.1

IRF8-203, Transcript of interferon regulatory factor 8, humanhuman

TSL 1 (best) BASIC

Gene IRF8, Length 1,394 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF8-203ENST00000563180 RGPD5Q99666 1765 aa23.54■■□□□ 1.36
IRF8-203ENST00000563180 GJD4Q96KN9 370 aaPredicted RBP23.53■■□□□ 1.36
IRF8-203ENST00000563180 AXIN2Q9Y2T1 843 aa23.52■■□□□ 1.36
IRF8-203ENST00000563180 ANKRD26Q9UPS8 1709 aa23.52■■□□□ 1.35
IRF8-203ENST00000563180 PER1O15534 1290 aaPredicted RBP23.5■■□□□ 1.35
IRF8-203ENST00000563180 GLI3P10071 1580 aa23.5■■□□□ 1.35
IRF8-203ENST00000563180 COL5A2P05997 1499 aaPredicted RBP23.49■■□□□ 1.35
IRF8-203ENST00000563180 MAP3K19Q56UN5 1328 aa23.48■■□□□ 1.35
IRF8-203ENST00000563180 RRS1Q15050 365 aaKnown RBP23.48■■□□□ 1.35
IRF8-203ENST00000563180 LARP1Q6PKG0 1096 aaKnown RBP23.48■■□□□ 1.35
IRF8-203ENST00000563180 SPATA31A5Q5VU36 1347 aa23.48■■□□□ 1.35
IRF8-203ENST00000563180 SPATA31A7Q8IWB4 1347 aa23.48■■□□□ 1.35
IRF8-203ENST00000563180 ABCC6O95255 1503 aa23.47■■□□□ 1.35
IRF8-203ENST00000563180 NSD2O96028 1365 aa23.47■■□□□ 1.35
IRF8-203ENST00000563180 AMER1Q5JTC6 1135 aaPredicted RBP23.47■■□□□ 1.35
IRF8-203ENST00000563180 AMPHP49418 695 aa23.46■■□□□ 1.35
IRF8-203ENST00000563180 IP6K1Q92551 441 aa23.46■■□□□ 1.35
IRF8-203ENST00000563180 CDK12Q9NYV4 1490 aaPredicted RBP23.45■■□□□ 1.35
IRF8-203ENST00000563180 TNNT2P45379 298 aaPredicted RBP23.45■■□□□ 1.34
IRF8-203ENST00000563180 MORC1Q86VD1 984 aa23.45■■□□□ 1.34
IRF8-203ENST00000563180 SPATA31A1Q5TZJ5 1347 aa23.44■■□□□ 1.34
IRF8-203ENST00000563180 MAP2P11137 1827 aaKnown RBP23.44■■□□□ 1.34
IRF8-203ENST00000563180 CSB-PGBD3P0DP91 1061 aa23.43■■□□□ 1.34
IRF8-203ENST00000563180 USP35Q9P2H5 1018 aa23.43■■□□□ 1.34
IRF8-203ENST00000563180 RGS12O14924 1447 aa23.43■■□□□ 1.34
IRF8-203ENST00000563180 HOXC9P31274 260 aa23.42■■□□□ 1.34
IRF8-203ENST00000563180 TOM1L2Q6ZVM7 507 aa23.42■■□□□ 1.34
IRF8-203ENST00000563180 WDR17Q8IZU2 1322 aa23.42■■□□□ 1.34
IRF8-203ENST00000563180 CNGB1Q14028 1251 aaPredicted RBP23.41■■□□□ 1.34
IRF8-203ENST00000563180 FAM98CQ17RN3 349 aaKnown RBP23.41■■□□□ 1.34
IRF8-203ENST00000563180 CC2D1BQ5T0F9 858 aaKnown RBP23.41■■□□□ 1.34
IRF8-203ENST00000563180 CRB1P82279 1406 aa23.41■■□□□ 1.34
IRF8-203ENST00000563180 BLMP54132 1417 aaPredicted RBP23.4■■□□□ 1.34
IRF8-203ENST00000563180 ANKRD24Q8TF21 1146 aa23.4■■□□□ 1.34
IRF8-203ENST00000563180 EMILIN1Q9Y6C2 1016 aa23.4■■□□□ 1.34
IRF8-203ENST00000563180 PEAK1Q9H792 1746 aa23.4■■□□□ 1.34
IRF8-203ENST00000563180 RTL1A6NKG5 1358 aa23.4■■□□□ 1.34
IRF8-203ENST00000563180 LTV1Q96GA3 475 aaPredicted RBP23.4■■□□□ 1.34
IRF8-203ENST00000563180 PPM1GO15355 546 aaPredicted RBP23.39■■□□□ 1.33
IRF8-203ENST00000563180 ONECUT3O60422 494 aaPredicted RBP23.39■■□□□ 1.33
IRF8-203ENST00000563180 POLKQ9UBT6 870 aa23.39■■□□□ 1.33
IRF8-203ENST00000563180 ERBB3P21860 1342 aa23.38■■□□□ 1.33
IRF8-203ENST00000563180 A0A0G2JS52 829 aa23.38■■□□□ 1.33
IRF8-203ENST00000563180 MYT1Q01538 1121 aa23.38■■□□□ 1.33
IRF8-203ENST00000563180 SEPT12Q8IYM1 358 aa23.38■■□□□ 1.33
IRF8-203ENST00000563180 TCP11L2Q8N4U5 519 aa23.38■■□□□ 1.33
IRF8-203ENST00000563180 DDX10Q13206 875 aaKnown RBP23.37■■□□□ 1.33
IRF8-203ENST00000563180 FLT4P35916 1363 aa23.36■■□□□ 1.33
IRF8-203ENST00000563180 KIF24Q5T7B8 1368 aa23.36■■□□□ 1.33
IRF8-203ENST00000563180 NPC1L1Q9UHC9 1359 aa23.36■■□□□ 1.33
IRF8-203ENST00000563180 HSP90AB2PQ58FF8 381 aa23.36■■□□□ 1.33
IRF8-203ENST00000563180 CARD10Q9BWT7 1032 aa23.36■■□□□ 1.33
IRF8-203ENST00000563180 NLRP2Q9NX02 1062 aa23.36■■□□□ 1.33
IRF8-203ENST00000563180 BARGINQ6ZT62 677 aa23.35■■□□□ 1.33
IRF8-203ENST00000563180 THRAP3Q9Y2W1 955 aaKnown RBP23.35■■□□□ 1.33
IRF8-203ENST00000563180 BRWD3Q6RI45 1802 aa23.35■■□□□ 1.33
IRF8-203ENST00000563180 INSRP06213 1382 aa23.34■■□□□ 1.33
IRF8-203ENST00000563180 ZNF316A6NFI3 1004 aaPredicted RBP23.32■■□□□ 1.32
IRF8-203ENST00000563180 FAM208AQ9UK61 1670 aaKnown RBP23.32■■□□□ 1.32
IRF8-203ENST00000563180 THSD7AQ9UPZ6 1657 aa23.32■■□□□ 1.32
IRF8-203ENST00000563180 RGPD2P0DJD1 1756 aa23.32■■□□□ 1.32
IRF8-203ENST00000563180 WNK3Q9BYP7 1800 aa23.29■■□□□ 1.32
IRF8-203ENST00000563180 SMG6Q86US8 1419 aaKnown RBP23.29■■□□□ 1.32
IRF8-203ENST00000563180 NBPF6Q5VWK0 638 aa23.27■■□□□ 1.31
IRF8-203ENST00000563180 KRT27Q7Z3Y8 459 aa23.27■■□□□ 1.31
IRF8-203ENST00000563180 NBPF4Q96M43 638 aa23.27■■□□□ 1.31
IRF8-203ENST00000563180 PARP4Q9UKK3 1724 aaKnown RBP23.25■■□□□ 1.31
IRF8-203ENST00000563180 MTHFSP49914 203 aa23.25■■□□□ 1.31
IRF8-203ENST00000563180 CDCA7Q9BWT1 371 aaPredicted RBP23.25■■□□□ 1.31
IRF8-203ENST00000563180 USHBP1Q8N6Y0 703 aa23.24■■□□□ 1.31
IRF8-203ENST00000563180 DISP2A7MBM2 1401 aa23.23■■□□□ 1.31
IRF8-203ENST00000563180 EIF4A2Q14240 407 aaKnown RBP23.23■■□□□ 1.31
IRF8-203ENST00000563180 IL2RBP14784 551 aa23.22■■□□□ 1.31
IRF8-203ENST00000563180 PDE3BQ13370 1112 aa23.22■■□□□ 1.31
IRF8-203ENST00000563180 DDB1Q16531 1140 aa23.21■■□□□ 1.31
IRF8-203ENST00000563180 FAM182BQ5T319 152 aa23.21■■□□□ 1.31
IRF8-203ENST00000563180 LRRC37A3O60309 1634 aa23.21■■□□□ 1.31
IRF8-203ENST00000563180 EXOC5O00471 708 aa23.19■■□□□ 1.3
IRF8-203ENST00000563180 EYA1Q99502 592 aa23.19■■□□□ 1.3
IRF8-203ENST00000563180 PPP2R1AP30153 589 aa23.18■■□□□ 1.3
IRF8-203ENST00000563180 PARD3Q8TEW0 1356 aa23.16■■□□□ 1.3
IRF8-203ENST00000563180 UPF1Q92900 1129 aaKnown RBP eCLIP23.15■■□□□ 1.3
IRF8-203ENST00000563180 IL13P35225 146 aa23.14■■□□□ 1.3
IRF8-203ENST00000563180 RAPGEF4Q8WZA2 1011 aa23.14■■□□□ 1.3
IRF8-203ENST00000563180 TATP17735 454 aaPredicted RBP23.14■■□□□ 1.29
IRF8-203ENST00000563180 MEGF6O75095 1541 aa23.13■■□□□ 1.29
IRF8-203ENST00000563180 NCAPD2Q15021 1401 aa23.13■■□□□ 1.29
IRF8-203ENST00000563180 TNS2Q63HR2 1409 aa23.13■■□□□ 1.29
IRF8-203ENST00000563180 MARCH10Q8NA82 808 aaPredicted RBP23.13■■□□□ 1.29
IRF8-203ENST00000563180 IGSF1Q8N6C5 1336 aa23.12■■□□□ 1.29
IRF8-203ENST00000563180 DIAPH1O60610 1272 aaKnown RBP23.12■■□□□ 1.29
IRF8-203ENST00000563180 RALBP1Q15311 655 aa23.12■■□□□ 1.29
IRF8-203ENST00000563180 FAM196AQ6ZSG2 479 aa23.12■■□□□ 1.29
IRF8-203ENST00000563180 CFAP53Q96M91 514 aa23.11■■□□□ 1.29
IRF8-203ENST00000563180 ZCRB1Q8TBF4 217 aaKnown RBP23.1■■□□□ 1.29
IRF8-203ENST00000563180 OVOS2A0A0G2JMS6 1433 aa23.1■■□□□ 1.29
IRF8-203ENST00000563180 COL3A1P02461 1466 aaPredicted RBP23.09■■□□□ 1.29
IRF8-203ENST00000563180 RGPD1P0DJD0 1748 aa23.09■■□□□ 1.29
IRF8-203ENST00000563180 DDX54Q8TDD1 881 aaKnown RBP23.08■■□□□ 1.29
IRF8-203ENST00000563180 SULT6B1Q6IMI4 303 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms