RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 BLMP54132 1417 aaPredicted RBP25.48■■□□□ 1.67
RAB40C-207ENST00000563109 FLT4P35916 1363 aa25.48■■□□□ 1.67
RAB40C-207ENST00000563109 AFF2P51816 1311 aa25.48■■□□□ 1.67
RAB40C-207ENST00000563109 RALBP1Q15311 655 aa25.48■■□□□ 1.67
RAB40C-207ENST00000563109 PHF23Q9BUL5 403 aaPredicted RBP25.48■■□□□ 1.67
RAB40C-207ENST00000563109 PPM1GO15355 546 aaPredicted RBP25.47■■□□□ 1.67
RAB40C-207ENST00000563109 BTG4Q9NY30 223 aa25.47■■□□□ 1.67
RAB40C-207ENST00000563109 EMILIN1Q9Y6C2 1016 aa25.47■■□□□ 1.67
RAB40C-207ENST00000563109 CAMTA1Q9Y6Y1 1673 aa25.47■■□□□ 1.67
RAB40C-207ENST00000563109 FNBP4Q8N3X1 1017 aaPredicted RBP25.46■■□□□ 1.67
RAB40C-207ENST00000563109 IP6K1Q92551 441 aa25.46■■□□□ 1.67
RAB40C-207ENST00000563109 POLKQ9UBT6 870 aa25.46■■□□□ 1.67
RAB40C-207ENST00000563109 CDK12Q9NYV4 1490 aaPredicted RBP25.46■■□□□ 1.67
RAB40C-207ENST00000563109 HOXC9P31274 260 aa25.45■■□□□ 1.66
RAB40C-207ENST00000563109 USP21Q9UK80 565 aa25.45■■□□□ 1.66
RAB40C-207ENST00000563109 COL5A2P05997 1499 aaPredicted RBP25.45■■□□□ 1.66
RAB40C-207ENST00000563109 FAM208AQ9UK61 1670 aaKnown RBP25.44■■□□□ 1.66
RAB40C-207ENST00000563109 ANP32CO43423 234 aa25.43■■□□□ 1.66
RAB40C-207ENST00000563109 EVA1CP58658 441 aa25.42■■□□□ 1.66
RAB40C-207ENST00000563109 UNC5CLQ8IV45 518 aa25.42■■□□□ 1.66
RAB40C-207ENST00000563109 BCL9LQ86UU0 1499 aa25.41■■□□□ 1.66
RAB40C-207ENST00000563109 PPP2R1AP30153 589 aa25.41■■□□□ 1.66
RAB40C-207ENST00000563109 ZNF772Q68DY9 489 aaPredicted RBP25.41■■□□□ 1.66
RAB40C-207ENST00000563109 PRKRIP1Q9H875 184 aaPredicted RBP25.41■■□□□ 1.66
RAB40C-207ENST00000563109 STRN4Q9NRL3 753 aa25.41■■□□□ 1.66
RAB40C-207ENST00000563109 INSRP06213 1382 aa25.41■■□□□ 1.66
RAB40C-207ENST00000563109 AXIN2Q9Y2T1 843 aa25.4■■□□□ 1.66
RAB40C-207ENST00000563109 MYBBP1AQ9BQG0 1328 aaKnown RBP25.39■■□□□ 1.66
RAB40C-207ENST00000563109 CSB-PGBD3P0DP91 1061 aa25.39■■□□□ 1.66
RAB40C-207ENST00000563109 MTHFSP49914 203 aa25.39■■□□□ 1.66
RAB40C-207ENST00000563109 ANKRD24Q8TF21 1146 aa25.38■■□□□ 1.65
RAB40C-207ENST00000563109 ERBB3P21860 1342 aa25.37■■□□□ 1.65
RAB40C-207ENST00000563109 HSP90AB2PQ58FF8 381 aa25.37■■□□□ 1.65
RAB40C-207ENST00000563109 TRPC5Q9UL62 973 aaPredicted RBP25.37■■□□□ 1.65
RAB40C-207ENST00000563109 WDR17Q8IZU2 1322 aa25.37■■□□□ 1.65
RAB40C-207ENST00000563109 LTV1Q96GA3 475 aaPredicted RBP25.36■■□□□ 1.65
RAB40C-207ENST00000563109 CFAP53Q96M91 514 aa25.36■■□□□ 1.65
RAB40C-207ENST00000563109 CCDC9Q9Y3X0 531 aaKnown RBP25.35■■□□□ 1.65
RAB40C-207ENST00000563109 ATRNO75882 1429 aa25.35■■□□□ 1.65
RAB40C-207ENST00000563109 CRB1P82279 1406 aa25.35■■□□□ 1.65
RAB40C-207ENST00000563109 VPS72Q15906 364 aa25.34■■□□□ 1.65
RAB40C-207ENST00000563109 DIEXFQ68CQ4 756 aaKnown RBP25.34■■□□□ 1.65
RAB40C-207ENST00000563109 TOM1L2Q6ZVM7 507 aa25.33■■□□□ 1.65
RAB40C-207ENST00000563109 LARP1Q6PKG0 1096 aaKnown RBP25.32■■□□□ 1.64
RAB40C-207ENST00000563109 RGPD2P0DJD1 1756 aa25.31■■□□□ 1.64
RAB40C-207ENST00000563109 QTRT2Q9H974 415 aaKnown RBP25.31■■□□□ 1.64
RAB40C-207ENST00000563109 COL3A1P02461 1466 aaPredicted RBP25.3■■□□□ 1.64
RAB40C-207ENST00000563109 NLRP2Q9NX02 1062 aa25.3■■□□□ 1.64
RAB40C-207ENST00000563109 EIF4A2Q14240 407 aaKnown RBP25.29■■□□□ 1.64
RAB40C-207ENST00000563109 SPATA31A5Q5VU36 1347 aa25.29■■□□□ 1.64
RAB40C-207ENST00000563109 SPATA31A7Q8IWB4 1347 aa25.29■■□□□ 1.64
RAB40C-207ENST00000563109 WNK3Q9BYP7 1800 aa25.28■■□□□ 1.64
RAB40C-207ENST00000563109 RGS17Q9UGC6 210 aaPredicted RBP25.28■■□□□ 1.64
RAB40C-207ENST00000563109 GLI3P10071 1580 aa25.27■■□□□ 1.64
RAB40C-207ENST00000563109 DIAPH1O60610 1272 aaKnown RBP25.27■■□□□ 1.64
RAB40C-207ENST00000563109 CARD10Q9BWT7 1032 aa25.27■■□□□ 1.64
RAB40C-207ENST00000563109 SPATA31A1Q5TZJ5 1347 aa25.27■■□□□ 1.64
RAB40C-207ENST00000563109 GJD4Q96KN9 370 aaPredicted RBP25.26■■□□□ 1.63
RAB40C-207ENST00000563109 USP35Q9P2H5 1018 aa25.26■■□□□ 1.63
RAB40C-207ENST00000563109 RGPD1P0DJD0 1748 aa25.25■■□□□ 1.63
RAB40C-207ENST00000563109 THRAP3Q9Y2W1 955 aaKnown RBP25.24■■□□□ 1.63
RAB40C-207ENST00000563109 IL13P35225 146 aa25.23■■□□□ 1.63
RAB40C-207ENST00000563109 RBM6P78332 1123 aaKnown RBP25.23■■□□□ 1.63
RAB40C-207ENST00000563109 TCP11L2Q8N4U5 519 aa25.23■■□□□ 1.63
RAB40C-207ENST00000563109 NUDCQ9Y266 331 aa25.23■■□□□ 1.63
RAB40C-207ENST00000563109 POTEAQ6S8J7 498 aa25.22■■□□□ 1.63
RAB40C-207ENST00000563109 RXRBP28702 533 aa25.21■■□□□ 1.63
RAB40C-207ENST00000563109 NBPF6Q5VWK0 638 aa25.21■■□□□ 1.63
RAB40C-207ENST00000563109 NBPF4Q96M43 638 aa25.21■■□□□ 1.63
RAB40C-207ENST00000563109 PARP4Q9UKK3 1724 aaKnown RBP25.2■■□□□ 1.63
RAB40C-207ENST00000563109 IGSF1Q8N6C5 1336 aa25.2■■□□□ 1.62
RAB40C-207ENST00000563109 EYA1Q99502 592 aa25.2■■□□□ 1.62
RAB40C-207ENST00000563109 U2SURPO15042 1029 aaKnown RBP25.19■■□□□ 1.62
RAB40C-207ENST00000563109 USHBP1Q8N6Y0 703 aa25.19■■□□□ 1.62
RAB40C-207ENST00000563109 NCAPD2Q15021 1401 aa25.19■■□□□ 1.62
RAB40C-207ENST00000563109 FAM98CQ17RN3 349 aaKnown RBP25.18■■□□□ 1.62
RAB40C-207ENST00000563109 BARGINQ6ZT62 677 aa25.18■■□□□ 1.62
RAB40C-207ENST00000563109 THSD7AQ9UPZ6 1657 aa25.17■■□□□ 1.62
RAB40C-207ENST00000563109 A0A0G2JS52 829 aa25.17■■□□□ 1.62
RAB40C-207ENST00000563109 MYT1Q01538 1121 aa25.17■■□□□ 1.62
RAB40C-207ENST00000563109 CDCA7Q9BWT1 371 aaPredicted RBP25.16■■□□□ 1.62
RAB40C-207ENST00000563109 RAPGEF4Q8WZA2 1011 aa25.15■■□□□ 1.62
RAB40C-207ENST00000563109 DISP2A7MBM2 1401 aa25.14■■□□□ 1.62
RAB40C-207ENST00000563109 IL2RBP14784 551 aa25.14■■□□□ 1.62
RAB40C-207ENST00000563109 MRS2Q9HD23 443 aa25.14■■□□□ 1.62
RAB40C-207ENST00000563109 LRRC37A3O60309 1634 aa25.14■■□□□ 1.61
RAB40C-207ENST00000563109 SULT6B1Q6IMI4 303 aa25.13■■□□□ 1.61
RAB40C-207ENST00000563109 MEGF6O75095 1541 aa25.12■■□□□ 1.61
RAB40C-207ENST00000563109 U2AF1L5P0DN76 240 aaPredicted RBP25.12■■□□□ 1.61
RAB40C-207ENST00000563109 TATP17735 454 aaPredicted RBP25.12■■□□□ 1.61
RAB40C-207ENST00000563109 U2AF1Q01081 240 aaKnown RBP eCLIP25.12■■□□□ 1.61
RAB40C-207ENST00000563109 WDR43Q15061 677 aaKnown RBP eCLIP25.12■■□□□ 1.61
RAB40C-207ENST00000563109 KDRP35968 1356 aa25.12■■□□□ 1.61
RAB40C-207ENST00000563109 RGS12O14924 1447 aa25.11■■□□□ 1.61
RAB40C-207ENST00000563109 HMOX1P09601 288 aa25.1■■□□□ 1.61
RAB40C-207ENST00000563109 AEBP1Q8IUX7 1158 aa25.1■■□□□ 1.61
RAB40C-207ENST00000563109 OVOS2A0A0G2JMS6 1433 aa25.1■■□□□ 1.61
RAB40C-207ENST00000563109 ONECUT3O60422 494 aaPredicted RBP25.09■■□□□ 1.61
RAB40C-207ENST00000563109 SEPT12Q8IYM1 358 aa25.09■■□□□ 1.61
RAB40C-207ENST00000563109 PKD1L3Q7Z443 1732 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms