RNA–Protein interactions for RNA: ENST00000562838.1

AC009065.4-203, humanhuman

TSL 2 BASIC

Gene AC009065.4, Length 535 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009065.4-203ENST00000562838 COL18A1P39060 1754 aa27.33■■□□□ 1.97
AC009065.4-203ENST00000562838 FBLN1P23142 703 aa27.32■■□□□ 1.96
AC009065.4-203ENST00000562838 ANKRD26Q9UPS8 1709 aa27.32■■□□□ 1.96
AC009065.4-203ENST00000562838 GLI3P10071 1580 aa27.3■■□□□ 1.96
AC009065.4-203ENST00000562838 AXIN2Q9Y2T1 843 aa27.29■■□□□ 1.96
AC009065.4-203ENST00000562838 COL5A2P05997 1499 aaPredicted RBP27.28■■□□□ 1.96
AC009065.4-203ENST00000562838 CSB-PGBD3P0DP91 1061 aa27.28■■□□□ 1.96
AC009065.4-203ENST00000562838 AMPHP49418 695 aa27.28■■□□□ 1.96
AC009065.4-203ENST00000562838 USP35Q9P2H5 1018 aa27.28■■□□□ 1.96
AC009065.4-203ENST00000562838 CDK12Q9NYV4 1490 aaPredicted RBP27.27■■□□□ 1.96
AC009065.4-203ENST00000562838 A0A0G2JS52 829 aa27.27■■□□□ 1.96
AC009065.4-203ENST00000562838 MYT1Q01538 1121 aa27.27■■□□□ 1.96
AC009065.4-203ENST00000562838 RRS1Q15050 365 aaKnown RBP27.27■■□□□ 1.96
AC009065.4-203ENST00000562838 LARP1Q6PKG0 1096 aaKnown RBP27.27■■□□□ 1.96
AC009065.4-203ENST00000562838 MAP2P11137 1827 aaKnown RBP27.26■■□□□ 1.95
AC009065.4-203ENST00000562838 TNNT2P45379 298 aaPredicted RBP27.26■■□□□ 1.95
AC009065.4-203ENST00000562838 MAP3K19Q56UN5 1328 aa27.25■■□□□ 1.95
AC009065.4-203ENST00000562838 SPATA31A5Q5VU36 1347 aa27.25■■□□□ 1.95
AC009065.4-203ENST00000562838 SPATA31A7Q8IWB4 1347 aa27.25■■□□□ 1.95
AC009065.4-203ENST00000562838 CNGB1Q14028 1251 aaPredicted RBP27.25■■□□□ 1.95
AC009065.4-203ENST00000562838 RGS12O14924 1447 aa27.24■■□□□ 1.95
AC009065.4-203ENST00000562838 NSD2O96028 1365 aa27.24■■□□□ 1.95
AC009065.4-203ENST00000562838 TOM1L2Q6ZVM7 507 aa27.24■■□□□ 1.95
AC009065.4-203ENST00000562838 ABCC6O95255 1503 aa27.24■■□□□ 1.95
AC009065.4-203ENST00000562838 FAM98CQ17RN3 349 aaKnown RBP27.23■■□□□ 1.95
AC009065.4-203ENST00000562838 MORC1Q86VD1 984 aa27.23■■□□□ 1.95
AC009065.4-203ENST00000562838 SPATA31A1Q5TZJ5 1347 aa27.22■■□□□ 1.95
AC009065.4-203ENST00000562838 IP6K1Q92551 441 aa27.21■■□□□ 1.95
AC009065.4-203ENST00000562838 LTV1Q96GA3 475 aaPredicted RBP27.21■■□□□ 1.95
AC009065.4-203ENST00000562838 WDR17Q8IZU2 1322 aa27.2■■□□□ 1.95
AC009065.4-203ENST00000562838 PPM1GO15355 546 aaPredicted RBP27.2■■□□□ 1.94
AC009065.4-203ENST00000562838 CRB1P82279 1406 aa27.2■■□□□ 1.94
AC009065.4-203ENST00000562838 CC2D1BQ5T0F9 858 aaKnown RBP27.2■■□□□ 1.94
AC009065.4-203ENST00000562838 PER1O15534 1290 aaPredicted RBP27.19■■□□□ 1.94
AC009065.4-203ENST00000562838 HOXC9P31274 260 aa27.19■■□□□ 1.94
AC009065.4-203ENST00000562838 AMER1Q5JTC6 1135 aaPredicted RBP27.19■■□□□ 1.94
AC009065.4-203ENST00000562838 ANKRD24Q8TF21 1146 aa27.19■■□□□ 1.94
AC009065.4-203ENST00000562838 UPF1Q92900 1129 aaKnown RBP eCLIP27.19■■□□□ 1.94
AC009065.4-203ENST00000562838 BLMP54132 1417 aaPredicted RBP27.17■■□□□ 1.94
AC009065.4-203ENST00000562838 SEPT12Q8IYM1 358 aa27.17■■□□□ 1.94
AC009065.4-203ENST00000562838 TCP11L2Q8N4U5 519 aa27.17■■□□□ 1.94
AC009065.4-203ENST00000562838 EMILIN1Q9Y6C2 1016 aa27.17■■□□□ 1.94
AC009065.4-203ENST00000562838 BRWD3Q6RI45 1802 aa27.17■■□□□ 1.94
AC009065.4-203ENST00000562838 NLRP2Q9NX02 1062 aa27.16■■□□□ 1.94
AC009065.4-203ENST00000562838 RTL1A6NKG5 1358 aa27.16■■□□□ 1.94
AC009065.4-203ENST00000562838 PEAK1Q9H792 1746 aa27.16■■□□□ 1.94
AC009065.4-203ENST00000562838 ERBB3P21860 1342 aa27.16■■□□□ 1.94
AC009065.4-203ENST00000562838 FLT4P35916 1363 aa27.13■■□□□ 1.93
AC009065.4-203ENST00000562838 THRAP3Q9Y2W1 955 aaKnown RBP27.12■■□□□ 1.93
AC009065.4-203ENST00000562838 RGPD2P0DJD1 1756 aa27.12■■□□□ 1.93
AC009065.4-203ENST00000562838 ONECUT3O60422 494 aaPredicted RBP27.11■■□□□ 1.93
AC009065.4-203ENST00000562838 DDX10Q13206 875 aaKnown RBP27.11■■□□□ 1.93
AC009065.4-203ENST00000562838 HSP90AB2PQ58FF8 381 aa27.11■■□□□ 1.93
AC009065.4-203ENST00000562838 CARD10Q9BWT7 1032 aa27.11■■□□□ 1.93
AC009065.4-203ENST00000562838 POLKQ9UBT6 870 aa27.11■■□□□ 1.93
AC009065.4-203ENST00000562838 FAM208AQ9UK61 1670 aaKnown RBP27.11■■□□□ 1.93
AC009065.4-203ENST00000562838 SMG6Q86US8 1419 aaKnown RBP27.1■■□□□ 1.93
AC009065.4-203ENST00000562838 BARGINQ6ZT62 677 aa27.1■■□□□ 1.93
AC009065.4-203ENST00000562838 KIF24Q5T7B8 1368 aa27.09■■□□□ 1.93
AC009065.4-203ENST00000562838 WNK3Q9BYP7 1800 aa27.09■■□□□ 1.93
AC009065.4-203ENST00000562838 THSD7AQ9UPZ6 1657 aa27.08■■□□□ 1.93
AC009065.4-203ENST00000562838 INSRP06213 1382 aa27.08■■□□□ 1.93
AC009065.4-203ENST00000562838 NPC1L1Q9UHC9 1359 aa27.07■■□□□ 1.92
AC009065.4-203ENST00000562838 KRT27Q7Z3Y8 459 aa27.06■■□□□ 1.92
AC009065.4-203ENST00000562838 PARP4Q9UKK3 1724 aaKnown RBP27.02■■□□□ 1.92
AC009065.4-203ENST00000562838 ZNF316A6NFI3 1004 aaPredicted RBP27.02■■□□□ 1.92
AC009065.4-203ENST00000562838 PDE3BQ13370 1112 aa27.02■■□□□ 1.92
AC009065.4-203ENST00000562838 CDCA7Q9BWT1 371 aaPredicted RBP27.01■■□□□ 1.91
AC009065.4-203ENST00000562838 USHBP1Q8N6Y0 703 aa27■■□□□ 1.91
AC009065.4-203ENST00000562838 DDB1Q16531 1140 aa26.99■■□□□ 1.91
AC009065.4-203ENST00000562838 NBPF6Q5VWK0 638 aa26.99■■□□□ 1.91
AC009065.4-203ENST00000562838 NBPF4Q96M43 638 aa26.99■■□□□ 1.91
AC009065.4-203ENST00000562838 IL2RBP14784 551 aa26.98■■□□□ 1.91
AC009065.4-203ENST00000562838 MTHFSP49914 203 aa26.98■■□□□ 1.91
AC009065.4-203ENST00000562838 FAM182BQ5T319 152 aa26.98■■□□□ 1.91
AC009065.4-203ENST00000562838 LRRC37A3O60309 1634 aa26.98■■□□□ 1.91
AC009065.4-203ENST00000562838 EXOC5O00471 708 aa26.95■■□□□ 1.9
AC009065.4-203ENST00000562838 EIF4A2Q14240 407 aaKnown RBP26.95■■□□□ 1.9
AC009065.4-203ENST00000562838 DISP2A7MBM2 1401 aa26.95■■□□□ 1.9
AC009065.4-203ENST00000562838 RAPGEF4Q8WZA2 1011 aa26.91■■□□□ 1.9
AC009065.4-203ENST00000562838 EYA1Q99502 592 aa26.91■■□□□ 1.9
AC009065.4-203ENST00000562838 KAT6BQ8WYB5 2073 aa26.91■■□□□ 1.9
AC009065.4-203ENST00000562838 TATP17735 454 aaPredicted RBP26.88■■□□□ 1.89
AC009065.4-203ENST00000562838 TNS2Q63HR2 1409 aa26.88■■□□□ 1.89
AC009065.4-203ENST00000562838 PPP2R1AP30153 589 aa26.87■■□□□ 1.89
AC009065.4-203ENST00000562838 FAM196AQ6ZSG2 479 aa26.87■■□□□ 1.89
AC009065.4-203ENST00000562838 MEGF6O75095 1541 aa26.86■■□□□ 1.89
AC009065.4-203ENST00000562838 CFAP53Q96M91 514 aa26.85■■□□□ 1.89
AC009065.4-203ENST00000562838 DIAPH1O60610 1272 aaKnown RBP26.84■■□□□ 1.89
AC009065.4-203ENST00000562838 SF3B2Q13435 895 aaKnown RBP26.84■■□□□ 1.89
AC009065.4-203ENST00000562838 MARCH10Q8NA82 808 aaPredicted RBP26.84■■□□□ 1.89
AC009065.4-203ENST00000562838 DDX54Q8TDD1 881 aaKnown RBP26.84■■□□□ 1.89
AC009065.4-203ENST00000562838 PARD3Q8TEW0 1356 aa26.84■■□□□ 1.89
AC009065.4-203ENST00000562838 OVOS2A0A0G2JMS6 1433 aa26.83■■□□□ 1.89
AC009065.4-203ENST00000562838 IL13P35225 146 aa26.83■■□□□ 1.89
AC009065.4-203ENST00000562838 ZCRB1Q8TBF4 217 aaKnown RBP26.83■■□□□ 1.89
AC009065.4-203ENST00000562838 EP400Q96L91 3159 aa26.83■■□□□ 1.89
AC009065.4-203ENST00000562838 IGSF1Q8N6C5 1336 aa26.82■■□□□ 1.88
AC009065.4-203ENST00000562838 RALBP1Q15311 655 aa26.81■■□□□ 1.88
AC009065.4-203ENST00000562838 CCDC125Q86Z20 511 aa26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms