RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 NUTM2AQ8IVF1 878 aaPredicted RBP8.41□□□□□ -1.06
DENND4A-205ENST00000562540 CCDC155Q8N6L0 562 aa8.41□□□□□ -1.06
DENND4A-205ENST00000562540 TSEN34Q9BSV6 310 aaKnown RBP8.41□□□□□ -1.06
DENND4A-205ENST00000562540 FSHRP23945 695 aa8.4□□□□□ -1.06
DENND4A-205ENST00000562540 MARSP56192 900 aaKnown RBP8.4□□□□□ -1.06
DENND4A-205ENST00000562540 MYSM1Q5VVJ2 828 aa8.4□□□□□ -1.06
DENND4A-205ENST00000562540 LIMD1Q9UGP4 676 aa8.4□□□□□ -1.06
DENND4A-205ENST00000562540 QPCTQ16769 361 aa8.39□□□□□ -1.07
DENND4A-205ENST00000562540 ARMC2Q8NEN0 867 aa8.39□□□□□ -1.07
DENND4A-205ENST00000562540 SLC35F4A4IF30 521 aa8.37□□□□□ -1.07
DENND4A-205ENST00000562540 PDE4DQ08499 809 aa8.37□□□□□ -1.07
DENND4A-205ENST00000562540 TUSC1Q2TAM9 212 aa8.37□□□□□ -1.07
DENND4A-205ENST00000562540 NBPF14Q5TI25 921 aa8.37□□□□□ -1.07
DENND4A-205ENST00000562540 VWA5B2Q8N398 1253 aa8.37□□□□□ -1.07
DENND4A-205ENST00000562540 HELBQ8NG08 1087 aaPredicted RBP8.37□□□□□ -1.07
DENND4A-205ENST00000562540 C1QTNF2Q9BXJ5 285 aa8.37□□□□□ -1.07
DENND4A-205ENST00000562540 LILRB3O75022 631 aa8.36□□□□□ -1.07
DENND4A-205ENST00000562540 ADAM23O75077 832 aa8.36□□□□□ -1.07
DENND4A-205ENST00000562540 ITGA6P23229 1130 aa8.36□□□□□ -1.07
DENND4A-205ENST00000562540 SCARF2Q96GP6 870 aaPredicted RBP8.36□□□□□ -1.07
DENND4A-205ENST00000562540 MAGEB6P1A0A0J9YX57 407 aa8.35□□□□□ -1.07
DENND4A-205ENST00000562540 CDC14CA4D256 554 aa8.35□□□□□ -1.07
DENND4A-205ENST00000562540 LYPD4Q6UWN0 246 aa8.35□□□□□ -1.07
DENND4A-205ENST00000562540 KRTAP4-8Q9BYQ9 185 aa8.35□□□□□ -1.07
DENND4A-205ENST00000562540 CLK2P49760 499 aaKnown RBP8.34□□□□□ -1.07
DENND4A-205ENST00000562540 CBLBQ13191 982 aa8.34□□□□□ -1.07
DENND4A-205ENST00000562540 VASH1Q7L8A9 365 aaPredicted RBP8.34□□□□□ -1.07
DENND4A-205ENST00000562540 SH3RF1Q7Z6J0 888 aa8.34□□□□□ -1.07
DENND4A-205ENST00000562540 MAP4K5Q9Y4K4 846 aa8.34□□□□□ -1.07
DENND4A-205ENST00000562540 EMILIN1Q9Y6C2 1016 aa8.34□□□□□ -1.07
DENND4A-205ENST00000562540 SPINT1O43278 529 aa8.33□□□□□ -1.08
DENND4A-205ENST00000562540 ADAMTS2O95450 1211 aa8.33□□□□□ -1.08
DENND4A-205ENST00000562540 ITGB2P05107 769 aa8.33□□□□□ -1.08
DENND4A-205ENST00000562540 RTL5Q5HYW3 569 aaPredicted RBP8.33□□□□□ -1.08
DENND4A-205ENST00000562540 SV2AQ7L0J3 742 aa8.33□□□□□ -1.08
DENND4A-205ENST00000562540 CCDC116Q8IYX3 515 aa8.33□□□□□ -1.08
DENND4A-205ENST00000562540 CARD14Q9BXL6 1004 aa8.33□□□□□ -1.08
DENND4A-205ENST00000562540 PLA2G4EQ3MJ16 856 aa8.32□□□□□ -1.08
DENND4A-205ENST00000562540 SH3BP5LQ7L8J4 393 aa8.32□□□□□ -1.08
DENND4A-205ENST00000562540 TRMT44Q8IYL2 757 aaKnown RBP8.32□□□□□ -1.08
DENND4A-205ENST00000562540 MSTNO14793 375 aa8.31□□□□□ -1.08
DENND4A-205ENST00000562540 Q6ZVU0 165 aa8.31□□□□□ -1.08
DENND4A-205ENST00000562540 SPOCK3Q9BQ16 436 aa8.31□□□□□ -1.08
DENND4A-205ENST00000562540 GPKOWQ92917 476 aaPredicted RBP eCLIP8.3□□□□□ -1.08
DENND4A-205ENST00000562540 SLC24A3Q9HC58 644 aa8.3□□□□□ -1.08
DENND4A-205ENST00000562540 RSPH6AQ9H0K4 717 aa8.29□□□□□ -1.08
DENND4A-205ENST00000562540 POLR3EQ9NVU0 708 aa8.29□□□□□ -1.08
DENND4A-205ENST00000562540 SENP3-EIF4A1A0A087X0R7 540 aa8.28□□□□□ -1.08
DENND4A-205ENST00000562540 CELA2BP08218 269 aaPredicted RBP8.28□□□□□ -1.08
DENND4A-205ENST00000562540 CTSOP43234 321 aaPredicted RBP8.28□□□□□ -1.08
DENND4A-205ENST00000562540 ERFEQ4G0M1 354 aa8.28□□□□□ -1.08
DENND4A-205ENST00000562540 PPP1R26Q5T8A7 1209 aaPredicted RBP8.28□□□□□ -1.08
DENND4A-205ENST00000562540 DCAF5Q96JK2 942 aa8.28□□□□□ -1.08
DENND4A-205ENST00000562540 PROCP04070 461 aa8.27□□□□□ -1.09
DENND4A-205ENST00000562540 MAP3K10Q02779 954 aa8.27□□□□□ -1.09
DENND4A-205ENST00000562540 SRSF11Q05519 484 aaKnown RBP8.27□□□□□ -1.09
DENND4A-205ENST00000562540 GAS6Q14393 721 aa8.27□□□□□ -1.09
DENND4A-205ENST00000562540 CNTNAP5Q8WYK1 1306 aa8.27□□□□□ -1.09
DENND4A-205ENST00000562540 AGBL1Q96MI9 1066 aa8.26□□□□□ -1.09
DENND4A-205ENST00000562540 ARHGAP9Q9BRR9 750 aa8.26□□□□□ -1.09
DENND4A-205ENST00000562540 PGPEP1Q9NXJ5 209 aa8.26□□□□□ -1.09
DENND4A-205ENST00000562540 CTDSPL2Q05D32 466 aa8.25□□□□□ -1.09
DENND4A-205ENST00000562540 SLC10A4Q96EP9 437 aa8.25□□□□□ -1.09
DENND4A-205ENST00000562540 INSM2Q96T92 566 aaPredicted RBP8.25□□□□□ -1.09
DENND4A-205ENST00000562540 RNF217Q8TC41 542 aa8.24□□□□□ -1.09
DENND4A-205ENST00000562540 CUEDC1Q9NWM3 386 aaPredicted RBP8.24□□□□□ -1.09
DENND4A-205ENST00000562540 RELBQ01201 579 aa8.23□□□□□ -1.09
DENND4A-205ENST00000562540 PDXDC2PQ6P474 469 aa8.23□□□□□ -1.09
DENND4A-205ENST00000562540 LRRN4Q8WUT4 740 aa8.23□□□□□ -1.09
DENND4A-205ENST00000562540 FKBPLQ9UIM3 349 aa8.23□□□□□ -1.09
DENND4A-205ENST00000562540 CDV3Q9UKY7 258 aaKnown RBP8.23□□□□□ -1.09
DENND4A-205ENST00000562540 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.22□□□□□ -1.09
DENND4A-205ENST00000562540 ZBTB33Q86T24 672 aa8.22□□□□□ -1.09
DENND4A-205ENST00000562540 KCTD15Q96SI1 283 aaPredicted RBP8.22□□□□□ -1.09
DENND4A-205ENST00000562540 POLMQ9NP87 494 aaPredicted RBP8.22□□□□□ -1.09
DENND4A-205ENST00000562540 PHF20L1A8MW92 1017 aa8.21□□□□□ -1.1
DENND4A-205ENST00000562540 DHX9Q08211 1270 aaKnown RBP8.21□□□□□ -1.1
DENND4A-205ENST00000562540 ATP1B4Q9UN42 357 aaPredicted RBP8.21□□□□□ -1.1
DENND4A-205ENST00000562540 GALNT6Q8NCL4 622 aa8.2□□□□□ -1.1
DENND4A-205ENST00000562540 KRTAP9-2Q9BYQ4 174 aa8.2□□□□□ -1.1
DENND4A-205ENST00000562540 ENAMQ9NRM1 1142 aa8.2□□□□□ -1.1
DENND4A-205ENST00000562540 ZC3H4Q9UPT8 1303 aaKnown RBP8.2□□□□□ -1.1
DENND4A-205ENST00000562540 NR6A1Q15406 480 aa8.19□□□□□ -1.1
DENND4A-205ENST00000562540 Q8N3U1 123 aa8.19□□□□□ -1.1
DENND4A-205ENST00000562540 ZNF395Q9H8N7 513 aaPredicted RBP8.19□□□□□ -1.1
DENND4A-205ENST00000562540 K7ELQ4 463 aaPredicted RBP8.18□□□□□ -1.1
DENND4A-205ENST00000562540 PTK2Q05397 1052 aa8.18□□□□□ -1.1
DENND4A-205ENST00000562540 SKIV2LQ15477 1246 aaKnown RBP8.18□□□□□ -1.1
DENND4A-205ENST00000562540 INTS6LQ5JSJ4 861 aaKnown RBP8.18□□□□□ -1.1
DENND4A-205ENST00000562540 FOXD4L5Q5VV16 416 aaPredicted RBP8.18□□□□□ -1.1
DENND4A-205ENST00000562540 PSMG3-AS1Q96PY0 264 aa8.18□□□□□ -1.1
DENND4A-205ENST00000562540 KRTAP9-6A0A140TA67 174 aa8.17□□□□□ -1.1
DENND4A-205ENST00000562540 SH3D19Q5HYK7 790 aa8.17□□□□□ -1.1
DENND4A-205ENST00000562540 BEND7Q8N7W2 519 aaPredicted RBP8.17□□□□□ -1.1
DENND4A-205ENST00000562540 AP1G2O75843 785 aa8.16□□□□□ -1.1
DENND4A-205ENST00000562540 PROCA1Q8NCQ7 364 aaPredicted RBP8.16□□□□□ -1.1
DENND4A-205ENST00000562540 MBIPQ9NS73 344 aa8.16□□□□□ -1.1
DENND4A-205ENST00000562540 IGF1RP08069 1367 aa8.15□□□□□ -1.1
DENND4A-205ENST00000562540 NBPF20Q3BBV1 942 aa8.15□□□□□ -1.1
DENND4A-205ENST00000562540 FBXO31Q5XUX0 539 aaPredicted RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms