RNA–Protein interactions for RNA: ENST00000562425.1

PKD1-226, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 608 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-226ENST00000562425 OVOS2Q6IE36 1432 aa22.62■■□□□ 1.21
PKD1-226ENST00000562425 MYOM1P52179 1685 aa22.62■■□□□ 1.21
PKD1-226ENST00000562425 USP54Q70EL1 1684 aa22.61■■□□□ 1.21
PKD1-226ENST00000562425 NSD3Q9BZ95 1437 aa22.6■■□□□ 1.21
PKD1-226ENST00000562425 FAM98CQ17RN3 349 aaKnown RBP22.6■■□□□ 1.21
PKD1-226ENST00000562425 GGNBP2Q9H3C7 697 aa22.6■■□□□ 1.21
PKD1-226ENST00000562425 RGPD1P0DJD0 1748 aa22.6■■□□□ 1.21
PKD1-226ENST00000562425 CGNL1Q0VF96 1302 aa22.59■■□□□ 1.21
PKD1-226ENST00000562425 KIF7Q2M1P5 1343 aa22.59■■□□□ 1.21
PKD1-226ENST00000562425 SPATA31A5Q5VU36 1347 aa22.59■■□□□ 1.21
PKD1-226ENST00000562425 SPATA31A7Q8IWB4 1347 aa22.59■■□□□ 1.21
PKD1-226ENST00000562425 CAMTA1Q9Y6Y1 1673 aa22.59■■□□□ 1.21
PKD1-226ENST00000562425 PANK3Q9H999 370 aa22.59■■□□□ 1.21
PKD1-226ENST00000562425 NFAT5O94916 1531 aa22.58■■□□□ 1.21
PKD1-226ENST00000562425 THSD7AQ9UPZ6 1657 aa22.57■■□□□ 1.2
PKD1-226ENST00000562425 LMO7Q8WWI1 1683 aa22.56■■□□□ 1.2
PKD1-226ENST00000562425 SPATA31A1Q5TZJ5 1347 aa22.56■■□□□ 1.2
PKD1-226ENST00000562425 ZEB1P37275 1124 aaPredicted RBP22.55■■□□□ 1.2
PKD1-226ENST00000562425 LARP1Q6PKG0 1096 aaKnown RBP22.55■■□□□ 1.2
PKD1-226ENST00000562425 AXIN2Q9Y2T1 843 aa22.55■■□□□ 1.2
PKD1-226ENST00000562425 DISP2A7MBM2 1401 aa22.55■■□□□ 1.2
PKD1-226ENST00000562425 COL5A2P05997 1499 aaPredicted RBP22.54■■□□□ 1.2
PKD1-226ENST00000562425 ABCC6O95255 1503 aa22.53■■□□□ 1.2
PKD1-226ENST00000562425 CSB-PGBD3P0DP91 1061 aa22.53■■□□□ 1.2
PKD1-226ENST00000562425 TOM1L2Q6ZVM7 507 aa22.52■■□□□ 1.2
PKD1-226ENST00000562425 TCP11L2Q8N4U5 519 aa22.52■■□□□ 1.2
PKD1-226ENST00000562425 USP35Q9P2H5 1018 aa22.52■■□□□ 1.2
PKD1-226ENST00000562425 THRAP3Q9Y2W1 955 aaKnown RBP22.52■■□□□ 1.2
PKD1-226ENST00000562425 KNSTRNQ9Y448 316 aa22.52■■□□□ 1.2
PKD1-226ENST00000562425 WDR17Q8IZU2 1322 aa22.52■■□□□ 1.2
PKD1-226ENST00000562425 CCDC7Q96M83 1385 aa22.51■■□□□ 1.19
PKD1-226ENST00000562425 COL18A1P39060 1754 aa22.5■■□□□ 1.19
PKD1-226ENST00000562425 CRB1P82279 1406 aa22.5■■□□□ 1.19
PKD1-226ENST00000562425 AMPHP49418 695 aa22.5■■□□□ 1.19
PKD1-226ENST00000562425 BARGINQ6ZT62 677 aa22.5■■□□□ 1.19
PKD1-226ENST00000562425 IP6K1Q92551 441 aa22.5■■□□□ 1.19
PKD1-226ENST00000562425 TNS1Q9HBL0 1735 aaKnown RBP22.49■■□□□ 1.19
PKD1-226ENST00000562425 KIF20BQ96Q89 1820 aa22.49■■□□□ 1.19
PKD1-226ENST00000562425 MAP3K19Q56UN5 1328 aa22.49■■□□□ 1.19
PKD1-226ENST00000562425 WASHC2AQ641Q2 1341 aa22.49■■□□□ 1.19
PKD1-226ENST00000562425 NSD2O96028 1365 aa22.47■■□□□ 1.19
PKD1-226ENST00000562425 PSDA5PKW4 1024 aaPredicted RBP22.46■■□□□ 1.19
PKD1-226ENST00000562425 FBLN1P23142 703 aa22.46■■□□□ 1.19
PKD1-226ENST00000562425 EN1Q05925 392 aaPredicted RBP22.46■■□□□ 1.19
PKD1-226ENST00000562425 CARD10Q9BWT7 1032 aa22.46■■□□□ 1.19
PKD1-226ENST00000562425 HOXC9P31274 260 aa22.45■■□□□ 1.18
PKD1-226ENST00000562425 RRS1Q15050 365 aaKnown RBP22.45■■□□□ 1.18
PKD1-226ENST00000562425 FAM196AQ6ZSG2 479 aa22.45■■□□□ 1.18
PKD1-226ENST00000562425 ANKRD24Q8TF21 1146 aa22.45■■□□□ 1.18
PKD1-226ENST00000562425 ERBB3P21860 1342 aa22.45■■□□□ 1.18
PKD1-226ENST00000562425 PARD3Q8TEW0 1356 aa22.45■■□□□ 1.18
PKD1-226ENST00000562425 LTN1O94822 1766 aa22.45■■□□□ 1.18
PKD1-226ENST00000562425 RTL1A6NKG5 1358 aa22.44■■□□□ 1.18
PKD1-226ENST00000562425 KIF24Q5T7B8 1368 aa22.43■■□□□ 1.18
PKD1-226ENST00000562425 CDCA7Q9BWT1 371 aaPredicted RBP22.43■■□□□ 1.18
PKD1-226ENST00000562425 NLRP2Q9NX02 1062 aa22.43■■□□□ 1.18
PKD1-226ENST00000562425 FAM182BQ5T319 152 aa22.42■■□□□ 1.18
PKD1-226ENST00000562425 MORC1Q86VD1 984 aa22.41■■□□□ 1.18
PKD1-226ENST00000562425 PDE3BQ13370 1112 aa22.4■■□□□ 1.18
PKD1-226ENST00000562425 LTV1Q96GA3 475 aaPredicted RBP22.4■■□□□ 1.18
PKD1-226ENST00000562425 RGPD5Q99666 1765 aa22.4■■□□□ 1.18
PKD1-226ENST00000562425 PER1O15534 1290 aaPredicted RBP22.39■■□□□ 1.17
PKD1-226ENST00000562425 FLT4P35916 1363 aa22.38■■□□□ 1.17
PKD1-226ENST00000562425 PPM1GO15355 546 aaPredicted RBP22.38■■□□□ 1.17
PKD1-226ENST00000562425 TNNT2P45379 298 aaPredicted RBP22.38■■□□□ 1.17
PKD1-226ENST00000562425 R3HDM1Q15032 1099 aaKnown RBP22.38■■□□□ 1.17
PKD1-226ENST00000562425 AMER1Q5JTC6 1135 aaPredicted RBP22.38■■□□□ 1.17
PKD1-226ENST00000562425 CAMKK2Q96RR4 588 aa22.38■■□□□ 1.17
PKD1-226ENST00000562425 TRIM37O94972 964 aa22.37■■□□□ 1.17
PKD1-226ENST00000562425 EMILIN1Q9Y6C2 1016 aa22.37■■□□□ 1.17
PKD1-226ENST00000562425 SMG6Q86US8 1419 aaKnown RBP22.37■■□□□ 1.17
PKD1-226ENST00000562425 INSRP06213 1382 aa22.37■■□□□ 1.17
PKD1-226ENST00000562425 EZH2Q15910 746 aaKnown RBP22.36■■□□□ 1.17
PKD1-226ENST00000562425 DDB1Q16531 1140 aa22.36■■□□□ 1.17
PKD1-226ENST00000562425 POLKQ9UBT6 870 aa22.36■■□□□ 1.17
PKD1-226ENST00000562425 HSP90AB2PQ58FF8 381 aa22.35■■□□□ 1.17
PKD1-226ENST00000562425 ANKRD26Q9UPS8 1709 aa22.34■■□□□ 1.17
PKD1-226ENST00000562425 RREB1Q92766 1687 aa22.34■■□□□ 1.17
PKD1-226ENST00000562425 APBA3O96018 575 aa22.33■■□□□ 1.17
PKD1-226ENST00000562425 IL2RBP14784 551 aa22.33■■□□□ 1.17
PKD1-226ENST00000562425 EXOC5O00471 708 aa22.32■■□□□ 1.16
PKD1-226ENST00000562425 NPC1L1Q9UHC9 1359 aa22.32■■□□□ 1.16
PKD1-226ENST00000562425 CC2D1BQ5T0F9 858 aaKnown RBP22.31■■□□□ 1.16
PKD1-226ENST00000562425 PARP4Q9UKK3 1724 aaKnown RBP22.31■■□□□ 1.16
PKD1-226ENST00000562425 FAM208AQ9UK61 1670 aaKnown RBP22.3■■□□□ 1.16
PKD1-226ENST00000562425 NUP188Q5SRE5 1749 aa22.29■■□□□ 1.16
PKD1-226ENST00000562425 NBPF6Q5VWK0 638 aa22.28■■□□□ 1.16
PKD1-226ENST00000562425 NBPF4Q96M43 638 aa22.28■■□□□ 1.16
PKD1-226ENST00000562425 PEAK1Q9H792 1746 aa22.28■■□□□ 1.16
PKD1-226ENST00000562425 MAP2P11137 1827 aaKnown RBP22.27■■□□□ 1.16
PKD1-226ENST00000562425 NBPF14Q5TI25 921 aa22.27■■□□□ 1.16
PKD1-226ENST00000562425 CNGB1Q14028 1251 aaPredicted RBP22.24■■□□□ 1.15
PKD1-226ENST00000562425 RAPGEF4Q8WZA2 1011 aa22.24■■□□□ 1.15
PKD1-226ENST00000562425 RGPD3A6NKT7 1758 aaPredicted RBP22.24■■□□□ 1.15
PKD1-226ENST00000562425 RGPD4Q7Z3J3 1758 aa22.24■■□□□ 1.15
PKD1-226ENST00000562425 OVOS2A0A0G2JMS6 1433 aa22.23■■□□□ 1.15
PKD1-226ENST00000562425 TNS2Q63HR2 1409 aa22.23■■□□□ 1.15
PKD1-226ENST00000562425 WNK3Q9BYP7 1800 aa22.22■■□□□ 1.15
PKD1-226ENST00000562425 LRRC37A3O60309 1634 aa22.22■■□□□ 1.15
PKD1-226ENST00000562425 USHBP1Q8N6Y0 703 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms