RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 EP400Q96L91 3159 aa24.89■■□□□ 1.58
CMTM3-204ENST00000562357 CSB-PGBD3P0DP91 1061 aa24.89■■□□□ 1.58
CMTM3-204ENST00000562357 PDE3BQ13370 1112 aa24.89■■□□□ 1.58
CMTM3-204ENST00000562357 ZRANB1Q9UGI0 708 aa24.87■■□□□ 1.57
CMTM3-204ENST00000562357 ANKRD36BQ8N2N9 1353 aa24.87■■□□□ 1.57
CMTM3-204ENST00000562357 WDR17Q8IZU2 1322 aa24.86■■□□□ 1.57
CMTM3-204ENST00000562357 NFAT5O94916 1531 aa24.86■■□□□ 1.57
CMTM3-204ENST00000562357 BAG6P46379 1132 aa24.85■■□□□ 1.57
CMTM3-204ENST00000562357 FAM182BQ5T319 152 aa24.84■■□□□ 1.57
CMTM3-204ENST00000562357 FAM196AQ6ZSG2 479 aa24.84■■□□□ 1.57
CMTM3-204ENST00000562357 AXIN2Q9Y2T1 843 aa24.84■■□□□ 1.57
CMTM3-204ENST00000562357 ABCC6O95255 1503 aa24.84■■□□□ 1.57
CMTM3-204ENST00000562357 USP54Q70EL1 1684 aa24.83■■□□□ 1.57
CMTM3-204ENST00000562357 COG3Q96JB2 828 aa24.83■■□□□ 1.57
CMTM3-204ENST00000562357 DEFB132Q7Z7B7 95 aa24.82■■□□□ 1.56
CMTM3-204ENST00000562357 OVOS2A0A0J9YW53 1432 aa24.81■■□□□ 1.56
CMTM3-204ENST00000562357 OVOS2Q6IE36 1432 aa24.81■■□□□ 1.56
CMTM3-204ENST00000562357 COL18A1P39060 1754 aa24.81■■□□□ 1.56
CMTM3-204ENST00000562357 CDCA7Q9BWT1 371 aaPredicted RBP24.8■■□□□ 1.56
CMTM3-204ENST00000562357 CARD10Q9BWT7 1032 aa24.79■■□□□ 1.56
CMTM3-204ENST00000562357 C11orf95C9JLR9 678 aaPredicted RBP24.78■■□□□ 1.56
CMTM3-204ENST00000562357 EIF4G2P78344 907 aaKnown RBP eCLIP24.78■■□□□ 1.56
CMTM3-204ENST00000562357 DDB1Q16531 1140 aa24.77■■□□□ 1.56
CMTM3-204ENST00000562357 RGPD1P0DJD0 1748 aa24.76■■□□□ 1.55
CMTM3-204ENST00000562357 CCDC7Q96M83 1385 aa24.76■■□□□ 1.55
CMTM3-204ENST00000562357 PARP4Q9UKK3 1724 aaKnown RBP24.75■■□□□ 1.55
CMTM3-204ENST00000562357 TRIM37O94972 964 aa24.74■■□□□ 1.55
CMTM3-204ENST00000562357 ERBB3P21860 1342 aa24.74■■□□□ 1.55
CMTM3-204ENST00000562357 POLR3GLQ9BT43 218 aa24.73■■□□□ 1.55
CMTM3-204ENST00000562357 NLRP2Q9NX02 1062 aa24.73■■□□□ 1.55
CMTM3-204ENST00000562357 ANKRD24Q8TF21 1146 aa24.72■■□□□ 1.55
CMTM3-204ENST00000562357 LTN1O94822 1766 aa24.72■■□□□ 1.55
CMTM3-204ENST00000562357 OVOS2A0A0G2JMS6 1433 aa24.71■■□□□ 1.55
CMTM3-204ENST00000562357 RGPD5Q99666 1765 aa24.71■■□□□ 1.55
CMTM3-204ENST00000562357 AMPHP49418 695 aa24.7■■□□□ 1.54
CMTM3-204ENST00000562357 EN1Q05925 392 aaPredicted RBP24.7■■□□□ 1.54
CMTM3-204ENST00000562357 IP6K1Q92551 441 aa24.7■■□□□ 1.54
CMTM3-204ENST00000562357 GGNBP2Q9H3C7 697 aa24.7■■□□□ 1.54
CMTM3-204ENST00000562357 DISP2A7MBM2 1401 aa24.69■■□□□ 1.54
CMTM3-204ENST00000562357 FYB1O15117 783 aa24.69■■□□□ 1.54
CMTM3-204ENST00000562357 APBA3O96018 575 aa24.69■■□□□ 1.54
CMTM3-204ENST00000562357 LRRC37A3O60309 1634 aa24.68■■□□□ 1.54
CMTM3-204ENST00000562357 EXOC5O00471 708 aa24.68■■□□□ 1.54
CMTM3-204ENST00000562357 HSPA5P11021 654 aaKnown RBP24.68■■□□□ 1.54
CMTM3-204ENST00000562357 MAP3K19Q56UN5 1328 aa24.67■■□□□ 1.54
CMTM3-204ENST00000562357 NSD3Q9BZ95 1437 aa24.67■■□□□ 1.54
CMTM3-204ENST00000562357 LTV1Q96GA3 475 aaPredicted RBP24.65■■□□□ 1.54
CMTM3-204ENST00000562357 TNS1Q9HBL0 1735 aaKnown RBP24.65■■□□□ 1.54
CMTM3-204ENST00000562357 WNK3Q9BYP7 1800 aa24.65■■□□□ 1.54
CMTM3-204ENST00000562357 PARD3Q8TEW0 1356 aa24.65■■□□□ 1.54
CMTM3-204ENST00000562357 HOXC9P31274 260 aa24.64■■□□□ 1.54
CMTM3-204ENST00000562357 MYOM1P52179 1685 aa24.64■■□□□ 1.53
CMTM3-204ENST00000562357 RTL1A6NKG5 1358 aa24.64■■□□□ 1.53
CMTM3-204ENST00000562357 IL2RBP14784 551 aa24.63■■□□□ 1.53
CMTM3-204ENST00000562357 TNS2Q63HR2 1409 aa24.62■■□□□ 1.53
CMTM3-204ENST00000562357 CARD14Q9BXL6 1004 aa24.62■■□□□ 1.53
CMTM3-204ENST00000562357 CGNL1Q0VF96 1302 aa24.61■■□□□ 1.53
CMTM3-204ENST00000562357 KIF20BQ96Q89 1820 aa24.61■■□□□ 1.53
CMTM3-204ENST00000562357 RRS1Q15050 365 aaKnown RBP24.61■■□□□ 1.53
CMTM3-204ENST00000562357 EZH2Q15910 746 aaKnown RBP24.61■■□□□ 1.53
CMTM3-204ENST00000562357 MARCH10Q8NA82 808 aaPredicted RBP24.61■■□□□ 1.53
CMTM3-204ENST00000562357 SMG6Q86US8 1419 aaKnown RBP24.61■■□□□ 1.53
CMTM3-204ENST00000562357 FBLN1P23142 703 aa24.59■■□□□ 1.53
CMTM3-204ENST00000562357 CAMKK2Q96RR4 588 aa24.59■■□□□ 1.53
CMTM3-204ENST00000562357 FAM208AQ9UK61 1670 aaKnown RBP24.59■■□□□ 1.53
CMTM3-204ENST00000562357 BCL9O00512 1426 aa24.58■■□□□ 1.53
CMTM3-204ENST00000562357 BCL11BQ9C0K0 894 aaPredicted RBP24.57■■□□□ 1.52
CMTM3-204ENST00000562357 PEAK1Q9H792 1746 aa24.57■■□□□ 1.52
CMTM3-204ENST00000562357 KIF24Q5T7B8 1368 aa24.56■■□□□ 1.52
CMTM3-204ENST00000562357 FLT4P35916 1363 aa24.55■■□□□ 1.52
CMTM3-204ENST00000562357 PSDA5PKW4 1024 aaPredicted RBP24.53■■□□□ 1.52
CMTM3-204ENST00000562357 NBPF14Q5TI25 921 aa24.53■■□□□ 1.52
CMTM3-204ENST00000562357 INSRP06213 1382 aa24.52■■□□□ 1.52
CMTM3-204ENST00000562357 PLSCR1O15162 318 aa24.5■■□□□ 1.51
CMTM3-204ENST00000562357 PPM1GO15355 546 aaPredicted RBP24.5■■□□□ 1.51
CMTM3-204ENST00000562357 R3HDM1Q15032 1099 aaKnown RBP24.5■■□□□ 1.51
CMTM3-204ENST00000562357 PANK3Q9H999 370 aa24.5■■□□□ 1.51
CMTM3-204ENST00000562357 HSP90AB2PQ58FF8 381 aa24.48■■□□□ 1.51
CMTM3-204ENST00000562357 RAPGEF4Q8WZA2 1011 aa24.48■■□□□ 1.51
CMTM3-204ENST00000562357 DDX54Q8TDD1 881 aaKnown RBP24.47■■□□□ 1.51
CMTM3-204ENST00000562357 EMILIN1Q9Y6C2 1016 aa24.47■■□□□ 1.51
CMTM3-204ENST00000562357 SBF2Q86WG5 1849 aa24.47■■□□□ 1.51
CMTM3-204ENST00000562357 NBPF6Q5VWK0 638 aa24.46■■□□□ 1.51
CMTM3-204ENST00000562357 NBPF4Q96M43 638 aa24.46■■□□□ 1.51
CMTM3-204ENST00000562357 NSD2O96028 1365 aa24.45■■□□□ 1.5
CMTM3-204ENST00000562357 ACSBG1Q96GR2 724 aa24.45■■□□□ 1.5
CMTM3-204ENST00000562357 RREB1Q92766 1687 aa24.45■■□□□ 1.5
CMTM3-204ENST00000562357 ZCRB1Q8TBF4 217 aaKnown RBP24.44■■□□□ 1.5
CMTM3-204ENST00000562357 KNSTRNQ9Y448 316 aa24.44■■□□□ 1.5
CMTM3-204ENST00000562357 RGPD3A6NKT7 1758 aaPredicted RBP24.44■■□□□ 1.5
CMTM3-204ENST00000562357 RGPD4Q7Z3J3 1758 aa24.44■■□□□ 1.5
CMTM3-204ENST00000562357 TATP17735 454 aaPredicted RBP24.43■■□□□ 1.5
CMTM3-204ENST00000562357 TNNT2P45379 298 aaPredicted RBP24.43■■□□□ 1.5
CMTM3-204ENST00000562357 PTF1AQ7RTS3 328 aa24.43■■□□□ 1.5
CMTM3-204ENST00000562357 USHBP1Q8N6Y0 703 aa24.43■■□□□ 1.5
CMTM3-204ENST00000562357 NUP188Q5SRE5 1749 aa24.41■■□□□ 1.5
CMTM3-204ENST00000562357 WASHC2AQ641Q2 1341 aa24.41■■□□□ 1.5
CMTM3-204ENST00000562357 KCNQ2O43526 872 aa24.41■■□□□ 1.5
CMTM3-204ENST00000562357 MEGF6O75095 1541 aa24.4■■□□□ 1.5
CMTM3-204ENST00000562357 NHSQ6T4R5 1651 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms