RNA–Protein interactions for RNA: ENST00000562028.1

DENND4A-204, Transcript of DENN domain containing 4A, humanhuman

TSL 3

Gene DENND4A, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-204ENST00000562028 CCDC125Q86Z20 511 aa10.87□□□□□ -0.67
DENND4A-204ENST00000562028 SEPT12Q8IYM1 358 aa10.87□□□□□ -0.67
DENND4A-204ENST00000562028 KCTD15Q96SI1 283 aaPredicted RBP10.87□□□□□ -0.67
DENND4A-204ENST00000562028 ARID3AQ99856 593 aa10.87□□□□□ -0.67
DENND4A-204ENST00000562028 GIGYF1O75420 1035 aaPredicted RBP10.86□□□□□ -0.67
DENND4A-204ENST00000562028 FOXC1Q12948 553 aa10.86□□□□□ -0.67
DENND4A-204ENST00000562028 PALM3A6NDB9 673 aaPredicted RBP10.85□□□□□ -0.67
DENND4A-204ENST00000562028 GDF9O60383 454 aa10.85□□□□□ -0.67
DENND4A-204ENST00000562028 ARID5BQ14865 1188 aa10.85□□□□□ -0.67
DENND4A-204ENST00000562028 RNF135Q8IUD6 432 aa10.85□□□□□ -0.67
DENND4A-204ENST00000562028 TFIP11Q9UBB9 837 aaKnown RBP10.85□□□□□ -0.67
DENND4A-204ENST00000562028 CHIC2Q9UKJ5 165 aa10.85□□□□□ -0.67
DENND4A-204ENST00000562028 PIK3CDO00329 1044 aa10.84□□□□□ -0.67
DENND4A-204ENST00000562028 ATP9BO43861 1147 aa10.84□□□□□ -0.67
DENND4A-204ENST00000562028 GRM5P41594 1212 aa10.84□□□□□ -0.67
DENND4A-204ENST00000562028 TBC1D9Q6ZT07 1266 aa10.84□□□□□ -0.67
DENND4A-204ENST00000562028 TLL2Q9Y6L7 1015 aa10.84□□□□□ -0.67
DENND4A-204ENST00000562028 SNIP1Q8TAD8 396 aaKnown RBP10.83□□□□□ -0.68
DENND4A-204ENST00000562028 ADH1CP00326 375 aa10.82□□□□□ -0.68
DENND4A-204ENST00000562028 SKIP12755 728 aa10.82□□□□□ -0.68
DENND4A-204ENST00000562028 PRR20EP86478 221 aa10.82□□□□□ -0.68
DENND4A-204ENST00000562028 PRR20CP86479 221 aa10.82□□□□□ -0.68
DENND4A-204ENST00000562028 PRR20DP86480 221 aa10.82□□□□□ -0.68
DENND4A-204ENST00000562028 PRR20BP86481 221 aa10.82□□□□□ -0.68
DENND4A-204ENST00000562028 PRR20AP86496 221 aa10.82□□□□□ -0.68
DENND4A-204ENST00000562028 NR5A1Q13285 461 aa10.82□□□□□ -0.68
DENND4A-204ENST00000562028 MAP7D1Q3KQU3 841 aa10.82□□□□□ -0.68
DENND4A-204ENST00000562028 CFAP70Q5T0N1 1121 aa10.82□□□□□ -0.68
DENND4A-204ENST00000562028 LZTS3O60299 673 aaPredicted RBP10.81□□□□□ -0.68
DENND4A-204ENST00000562028 INTS6LQ5JSJ4 861 aaKnown RBP10.81□□□□□ -0.68
DENND4A-204ENST00000562028 PLPP7Q8NBV4 271 aa10.81□□□□□ -0.68
DENND4A-204ENST00000562028 MAFBQ9Y5Q3 323 aaPredicted RBP10.81□□□□□ -0.68
DENND4A-204ENST00000562028 ALDH1A1P00352 501 aa10.8□□□□□ -0.68
DENND4A-204ENST00000562028 TRIM67Q6ZTA4 783 aa10.8□□□□□ -0.68
DENND4A-204ENST00000562028 CYP4X1Q8N118 509 aa10.8□□□□□ -0.68
DENND4A-204ENST00000562028 FSHRP23945 695 aa10.79□□□□□ -0.68
DENND4A-204ENST00000562028 LMOD1P29536 600 aaPredicted RBP10.79□□□□□ -0.68
DENND4A-204ENST00000562028 DHX9Q08211 1270 aaKnown RBP10.79□□□□□ -0.68
DENND4A-204ENST00000562028 TRAF7Q6Q0C0 670 aa10.79□□□□□ -0.68
DENND4A-204ENST00000562028 PLEKHM2Q8IWE5 1019 aa10.79□□□□□ -0.68
DENND4A-204ENST00000562028 CCDC85AQ96PX6 553 aaPredicted RBP10.79□□□□□ -0.68
DENND4A-204ENST00000562028 TOR4AQ9NXH8 423 aa10.79□□□□□ -0.68
DENND4A-204ENST00000562028 TTC24A2A3L6 582 aaPredicted RBP10.78□□□□□ -0.68
DENND4A-204ENST00000562028 USP17L5A8MUK1 530 aa10.78□□□□□ -0.68
DENND4A-204ENST00000562028 TNFRSF10AO00220 468 aa10.78□□□□□ -0.68
DENND4A-204ENST00000562028 DOLKQ9UPQ8 538 aa10.78□□□□□ -0.68
DENND4A-204ENST00000562028 USP17L3A6NCW0 530 aa10.77□□□□□ -0.69
DENND4A-204ENST00000562028 USP17L4A6NCW7 530 aa10.77□□□□□ -0.69
DENND4A-204ENST00000562028 TSGA10IPQ3SY00 556 aa10.77□□□□□ -0.69
DENND4A-204ENST00000562028 USP17L2Q6R6M4 530 aa10.77□□□□□ -0.69
DENND4A-204ENST00000562028 USP17L1Q7RTZ2 530 aa10.77□□□□□ -0.69
DENND4A-204ENST00000562028 TRIM52Q96A61 297 aa10.77□□□□□ -0.69
DENND4A-204ENST00000562028 WASF2Q9Y6W5 498 aa10.77□□□□□ -0.69
DENND4A-204ENST00000562028 ERVH48-1M5A8F1 160 aa10.76□□□□□ -0.69
DENND4A-204ENST00000562028 PPP1R15AO75807 674 aaPredicted RBP10.76□□□□□ -0.69
DENND4A-204ENST00000562028 RAB15P59190 212 aa10.76□□□□□ -0.69
DENND4A-204ENST00000562028 CCDC116Q8IYX3 515 aa10.76□□□□□ -0.69
DENND4A-204ENST00000562028 PCDHB11Q9Y5F2 797 aa10.76□□□□□ -0.69
DENND4A-204ENST00000562028 RFX1P22670 979 aa10.75□□□□□ -0.69
DENND4A-204ENST00000562028 J3QL48 77 aa10.74□□□□□ -0.69
DENND4A-204ENST00000562028 NR3C2P08235 984 aa10.74□□□□□ -0.69
DENND4A-204ENST00000562028 SRPK2P78362 688 aaKnown RBP10.74□□□□□ -0.69
DENND4A-204ENST00000562028 NCOA4Q13772 614 aa10.74□□□□□ -0.69
DENND4A-204ENST00000562028 EML3Q32P44 896 aa10.74□□□□□ -0.69
DENND4A-204ENST00000562028 PBXIP1Q96AQ6 731 aa10.74□□□□□ -0.69
DENND4A-204ENST00000562028 SIRT1Q96EB6 747 aa10.74□□□□□ -0.69
DENND4A-204ENST00000562028 USP4Q13107 963 aa10.73□□□□□ -0.69
DENND4A-204ENST00000562028 NNTQ13423 1086 aa10.73□□□□□ -0.69
DENND4A-204ENST00000562028 DEPDC4Q8N2C3 294 aa10.73□□□□□ -0.69
DENND4A-204ENST00000562028 CDCA7Q9BWT1 371 aaPredicted RBP10.73□□□□□ -0.69
DENND4A-204ENST00000562028 SMPD1P17405 629 aa10.72□□□□□ -0.69
DENND4A-204ENST00000562028 PPP1R26Q5T8A7 1209 aaPredicted RBP10.72□□□□□ -0.69
DENND4A-204ENST00000562028 VRTNQ9H8Y1 702 aa10.72□□□□□ -0.69
DENND4A-204ENST00000562028 PDZRN3Q9UPQ7 1066 aa10.72□□□□□ -0.69
DENND4A-204ENST00000562028 EMILIN1Q9Y6C2 1016 aa10.72□□□□□ -0.69
DENND4A-204ENST00000562028 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.71□□□□□ -0.69
DENND4A-204ENST00000562028 OXLD1Q5BKU9 147 aa10.71□□□□□ -0.69
DENND4A-204ENST00000562028 KANK4Q5T7N3 995 aaPredicted RBP10.71□□□□□ -0.69
DENND4A-204ENST00000562028 PGPEP1Q9NXJ5 209 aa10.71□□□□□ -0.69
DENND4A-204ENST00000562028 MKRN1Q9UHC7 482 aaKnown RBP10.71□□□□□ -0.69
DENND4A-204ENST00000562028 NOD1Q9Y239 953 aa10.71□□□□□ -0.69
DENND4A-204ENST00000562028 ATP5J2-PTCD1G3V325 749 aa10.7□□□□□ -0.7
DENND4A-204ENST00000562028 ERVK-9P63128 1117 aa10.7□□□□□ -0.7
DENND4A-204ENST00000562028 TMPRSS4Q9NRS4 437 aa10.7□□□□□ -0.7
DENND4A-204ENST00000562028 MYCP01106 439 aaPredicted RBP10.69□□□□□ -0.7
DENND4A-204ENST00000562028 CC2D2BQ6DHV5 1058 aa10.69□□□□□ -0.7
DENND4A-204ENST00000562028 TRIM50Q86XT4 487 aa10.69□□□□□ -0.7
DENND4A-204ENST00000562028 ZNF784Q8NCA9 323 aaPredicted RBP10.69□□□□□ -0.7
DENND4A-204ENST00000562028 ACIN1Q9UKV3 1341 aaKnown RBP10.68□□□□□ -0.7
DENND4A-204ENST00000562028 MYT1Q01538 1121 aa10.68□□□□□ -0.7
DENND4A-204ENST00000562028 KLF16Q9BXK1 252 aaPredicted RBP10.68□□□□□ -0.7
DENND4A-204ENST00000562028 LILRA1O75019 489 aa10.67□□□□□ -0.7
DENND4A-204ENST00000562028 SCTRP47872 440 aa10.67□□□□□ -0.7
DENND4A-204ENST00000562028 ESF1Q9H501 851 aaKnown RBP10.67□□□□□ -0.7
DENND4A-204ENST00000562028 ATP1A2P50993 1020 aa10.66□□□□□ -0.7
DENND4A-204ENST00000562028 ARXQ96QS3 562 aa10.66□□□□□ -0.7
DENND4A-204ENST00000562028 CYLDQ9NQC7 956 aa10.66□□□□□ -0.7
DENND4A-204ENST00000562028 FAM196BA6NMK8 535 aa10.65□□□□□ -0.7
DENND4A-204ENST00000562028 ATG7O95352 703 aa10.65□□□□□ -0.7
DENND4A-204ENST00000562028 WDR4P57081 412 aaKnown RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms