RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 USP6P35125 1406 aa16.96■□□□□ 0.3
NSMCE1-202ENST00000561960 KCNQ2O43526 872 aa16.95■□□□□ 0.3
NSMCE1-202ENST00000561960 ZBTB7AO95365 584 aa16.95■□□□□ 0.3
NSMCE1-202ENST00000561960 SPON1Q9HCB6 807 aa16.95■□□□□ 0.3
NSMCE1-202ENST00000561960 DDB1Q16531 1140 aa16.94■□□□□ 0.3
NSMCE1-202ENST00000561960 GOLGB1Q14789 3259 aaKnown RBP16.93■□□□□ 0.3
NSMCE1-202ENST00000561960 BCL11BQ9C0K0 894 aaPredicted RBP16.93■□□□□ 0.3
NSMCE1-202ENST00000561960 ATF5Q9Y2D1 282 aaPredicted RBP16.93■□□□□ 0.3
NSMCE1-202ENST00000561960 MARCH10Q8NA82 808 aaPredicted RBP16.92■□□□□ 0.3
NSMCE1-202ENST00000561960 THRAP3Q9Y2W1 955 aaKnown RBP16.92■□□□□ 0.3
NSMCE1-202ENST00000561960 TRPM1Q7Z4N2 1603 aa16.92■□□□□ 0.3
NSMCE1-202ENST00000561960 CSB-PGBD3P0DP91 1061 aa16.91■□□□□ 0.3
NSMCE1-202ENST00000561960 LTN1O94822 1766 aa16.91■□□□□ 0.3
NSMCE1-202ENST00000561960 CPSF1Q10570 1443 aaKnown RBP16.9■□□□□ 0.3
NSMCE1-202ENST00000561960 PROM2Q8N271 834 aa16.9■□□□□ 0.3
NSMCE1-202ENST00000561960 STAC3Q96MF2 364 aa16.9■□□□□ 0.3
NSMCE1-202ENST00000561960 AATKQ6ZMQ8 1374 aa16.89■□□□□ 0.3
NSMCE1-202ENST00000561960 ACSBG1Q96GR2 724 aa16.88■□□□□ 0.29
NSMCE1-202ENST00000561960 WDR17Q8IZU2 1322 aa16.88■□□□□ 0.29
NSMCE1-202ENST00000561960 BTAF1O14981 1849 aa16.87■□□□□ 0.29
NSMCE1-202ENST00000561960 NFAT5O94916 1531 aa16.86■□□□□ 0.29
NSMCE1-202ENST00000561960 SIN3AQ96ST3 1273 aa16.86■□□□□ 0.29
NSMCE1-202ENST00000561960 MON2Q7Z3U7 1717 aa16.86■□□□□ 0.29
NSMCE1-202ENST00000561960 NINLQ9Y2I6 1382 aa16.86■□□□□ 0.29
NSMCE1-202ENST00000561960 NHSQ6T4R5 1651 aa16.85■□□□□ 0.29
NSMCE1-202ENST00000561960 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.85■□□□□ 0.29
NSMCE1-202ENST00000561960 L3MBTL2Q969R5 705 aa16.85■□□□□ 0.29
NSMCE1-202ENST00000561960 TTC21BQ7Z4L5 1316 aa16.85■□□□□ 0.29
NSMCE1-202ENST00000561960 NEUROD1Q13562 356 aa16.84■□□□□ 0.29
NSMCE1-202ENST00000561960 DCAF8L1A6NGE4 600 aa16.83■□□□□ 0.28
NSMCE1-202ENST00000561960 PLSCR1O15162 318 aa16.83■□□□□ 0.28
NSMCE1-202ENST00000561960 PTGER2P43116 358 aa16.83■□□□□ 0.28
NSMCE1-202ENST00000561960 CHD4Q14839 1912 aa16.83■□□□□ 0.28
NSMCE1-202ENST00000561960 TXNRD1Q16881 649 aa16.83■□□□□ 0.28
NSMCE1-202ENST00000561960 EVC2Q86UK5 1308 aa16.83■□□□□ 0.28
NSMCE1-202ENST00000561960 ARHGEF25Q86VW2 580 aa16.83■□□□□ 0.28
NSMCE1-202ENST00000561960 TUBGCP6Q96RT7 1819 aa16.82■□□□□ 0.28
NSMCE1-202ENST00000561960 RGPD2P0DJD1 1756 aa16.82■□□□□ 0.28
NSMCE1-202ENST00000561960 KTN1Q86UP2 1357 aaKnown RBP16.81■□□□□ 0.28
NSMCE1-202ENST00000561960 FHDC1Q9C0D6 1143 aaPredicted RBP16.81■□□□□ 0.28
NSMCE1-202ENST00000561960 STK32BQ9NY57 414 aa16.81■□□□□ 0.28
NSMCE1-202ENST00000561960 ROCK2O75116 1388 aaKnown RBP16.8■□□□□ 0.28
NSMCE1-202ENST00000561960 CARD10Q9BWT7 1032 aa16.8■□□□□ 0.28
NSMCE1-202ENST00000561960 TNS2Q63HR2 1409 aa16.79■□□□□ 0.28
NSMCE1-202ENST00000561960 EXOC5O00471 708 aa16.79■□□□□ 0.28
NSMCE1-202ENST00000561960 NME9Q86XW9 330 aa16.79■□□□□ 0.28
NSMCE1-202ENST00000561960 NLRP2Q9NX02 1062 aa16.79■□□□□ 0.28
NSMCE1-202ENST00000561960 BRD4O60885 1362 aaPredicted RBP16.78■□□□□ 0.28
NSMCE1-202ENST00000561960 PAPPAQ13219 1627 aa16.78■□□□□ 0.28
NSMCE1-202ENST00000561960 SLC15A2Q16348 729 aa16.78■□□□□ 0.28
NSMCE1-202ENST00000561960 KLHL34Q8N239 644 aa16.78■□□□□ 0.28
NSMCE1-202ENST00000561960 KCNQ4P56696 695 aa16.77■□□□□ 0.28
NSMCE1-202ENST00000561960 C11orf95C9JLR9 678 aaPredicted RBP16.76■□□□□ 0.27
NSMCE1-202ENST00000561960 ZNF827Q17R98 1081 aa16.76■□□□□ 0.27
NSMCE1-202ENST00000561960 ZNF784Q8NCA9 323 aaPredicted RBP16.76■□□□□ 0.27
NSMCE1-202ENST00000561960 KCNH5Q8NCM2 988 aa16.76■□□□□ 0.27
NSMCE1-202ENST00000561960 DOT1LQ8TEK3 1739 aa16.76■□□□□ 0.27
NSMCE1-202ENST00000561960 ABCC6O95255 1503 aa16.75■□□□□ 0.27
NSMCE1-202ENST00000561960 TMC1Q8TDI8 760 aa16.75■□□□□ 0.27
NSMCE1-202ENST00000561960 LTV1Q96GA3 475 aaPredicted RBP16.75■□□□□ 0.27
NSMCE1-202ENST00000561960 SYT17Q9BSW7 474 aa16.75■□□□□ 0.27
NSMCE1-202ENST00000561960 CDCA7Q9BWT1 371 aaPredicted RBP16.74■□□□□ 0.27
NSMCE1-202ENST00000561960 USP54Q70EL1 1684 aa16.74■□□□□ 0.27
NSMCE1-202ENST00000561960 CD163L1Q9NR16 1453 aa16.73■□□□□ 0.27
NSMCE1-202ENST00000561960 TTC21AQ8NDW8 1320 aa16.73■□□□□ 0.27
NSMCE1-202ENST00000561960 PELP1Q8IZL8 1130 aaKnown RBP16.73■□□□□ 0.27
NSMCE1-202ENST00000561960 CCDC7Q96M83 1385 aa16.73■□□□□ 0.27
NSMCE1-202ENST00000561960 ANKRD24Q8TF21 1146 aa16.72■□□□□ 0.27
NSMCE1-202ENST00000561960 ZNF692Q9BU19 519 aaPredicted RBP16.72■□□□□ 0.27
NSMCE1-202ENST00000561960 MTFR1LQ9H019 292 aa16.72■□□□□ 0.27
NSMCE1-202ENST00000561960 LRRC4BQ9NT99 713 aa16.72■□□□□ 0.27
NSMCE1-202ENST00000561960 ERBB3P21860 1342 aa16.71■□□□□ 0.27
NSMCE1-202ENST00000561960 BCL9O00512 1426 aa16.71■□□□□ 0.27
NSMCE1-202ENST00000561960 SHANK3Q9BYB0 1731 aa16.71■□□□□ 0.27
NSMCE1-202ENST00000561960 SGIP1Q9BQI5 828 aa16.71■□□□□ 0.27
NSMCE1-202ENST00000561960 SBNO2Q9Y2G9 1366 aa16.7■□□□□ 0.26
NSMCE1-202ENST00000561960 IL2RBP14784 551 aa16.7■□□□□ 0.26
NSMCE1-202ENST00000561960 FBLN1P23142 703 aa16.7■□□□□ 0.26
NSMCE1-202ENST00000561960 DDX54Q8TDD1 881 aaKnown RBP16.7■□□□□ 0.26
NSMCE1-202ENST00000561960 ARXQ96QS3 562 aa16.7■□□□□ 0.26
NSMCE1-202ENST00000561960 CEP350Q5VT06 3117 aa16.7■□□□□ 0.26
NSMCE1-202ENST00000561960 SYTL4Q96C24 671 aaPredicted RBP16.69■□□□□ 0.26
NSMCE1-202ENST00000561960 SLC12A5Q9H2X9 1139 aa16.69■□□□□ 0.26
NSMCE1-202ENST00000561960 SENP3-EIF4A1A0A087X0R7 540 aa16.68■□□□□ 0.26
NSMCE1-202ENST00000561960 QSER1Q2KHR3 1735 aa16.67■□□□□ 0.26
NSMCE1-202ENST00000561960 FAM208AQ9UK61 1670 aaKnown RBP16.65■□□□□ 0.26
NSMCE1-202ENST00000561960 A0A1W2PP64 1363 aa16.65■□□□□ 0.26
NSMCE1-202ENST00000561960 LY75O60449 1722 aa16.65■□□□□ 0.26
NSMCE1-202ENST00000561960 GPR162Q16538 588 aa16.65■□□□□ 0.26
NSMCE1-202ENST00000561960 CARD11Q9BXL7 1154 aa16.65■□□□□ 0.26
NSMCE1-202ENST00000561960 USP31Q70CQ4 1352 aa16.64■□□□□ 0.26
NSMCE1-202ENST00000561960 NLGN2Q8NFZ4 835 aa16.64■□□□□ 0.25
NSMCE1-202ENST00000561960 HDGFL2Q7Z4V5 671 aaPredicted RBP16.63■□□□□ 0.25
NSMCE1-202ENST00000561960 PNPLA7Q6ZV29 1317 aa16.63■□□□□ 0.25
NSMCE1-202ENST00000561960 MSH5O43196 834 aa16.62■□□□□ 0.25
NSMCE1-202ENST00000561960 PRIM1P49642 420 aaKnown RBP16.62■□□□□ 0.25
NSMCE1-202ENST00000561960 MSL1Q68DK7 614 aa16.62■□□□□ 0.25
NSMCE1-202ENST00000561960 USHBP1Q8N6Y0 703 aa16.62■□□□□ 0.25
NSMCE1-202ENST00000561960 AKT1S1Q96B36 256 aa16.62■□□□□ 0.25
NSMCE1-202ENST00000561960 COL24A1Q17RW2 1714 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms