RNA–Protein interactions for RNA: ENST00000561749.1

SMPD3-202, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 2

Gene SMPD3, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-202ENST00000561749 RGS12O14924 1447 aa32.21■■■□□ 2.75
SMPD3-202ENST00000561749 EVA1CP58658 441 aa32.21■■■□□ 2.75
SMPD3-202ENST00000561749 CGNL1Q0VF96 1302 aa32.21■■■□□ 2.75
SMPD3-202ENST00000561749 COL5A2P05997 1499 aaPredicted RBP32.2■■■□□ 2.75
SMPD3-202ENST00000561749 CDK12Q9NYV4 1490 aaPredicted RBP32.19■■■□□ 2.74
SMPD3-202ENST00000561749 AXIN2Q9Y2T1 843 aa32.19■■■□□ 2.74
SMPD3-202ENST00000561749 LARP1Q6PKG0 1096 aaKnown RBP32.16■■■□□ 2.74
SMPD3-202ENST00000561749 SPATA31A5Q5VU36 1347 aa32.15■■■□□ 2.74
SMPD3-202ENST00000561749 SPATA31A7Q8IWB4 1347 aa32.15■■■□□ 2.74
SMPD3-202ENST00000561749 ABCC6O95255 1503 aa32.14■■■□□ 2.74
SMPD3-202ENST00000561749 MAP3K19Q56UN5 1328 aa32.12■■■□□ 2.73
SMPD3-202ENST00000561749 USP35Q9P2H5 1018 aa32.12■■■□□ 2.73
SMPD3-202ENST00000561749 KNSTRNQ9Y448 316 aa32.12■■■□□ 2.73
SMPD3-202ENST00000561749 BRWD3Q6RI45 1802 aa32.12■■■□□ 2.73
SMPD3-202ENST00000561749 RRS1Q15050 365 aaKnown RBP32.11■■■□□ 2.73
SMPD3-202ENST00000561749 MAP2P11137 1827 aaKnown RBP32.1■■■□□ 2.73
SMPD3-202ENST00000561749 SPATA31A1Q5TZJ5 1347 aa32.1■■■□□ 2.73
SMPD3-202ENST00000561749 FAM98CQ17RN3 349 aaKnown RBP32.09■■■□□ 2.73
SMPD3-202ENST00000561749 PEAK1Q9H792 1746 aa32.08■■■□□ 2.73
SMPD3-202ENST00000561749 A0A0G2JS52 829 aa32.07■■■□□ 2.72
SMPD3-202ENST00000561749 CSB-PGBD3P0DP91 1061 aa32.07■■■□□ 2.72
SMPD3-202ENST00000561749 MYT1Q01538 1121 aa32.07■■■□□ 2.72
SMPD3-202ENST00000561749 TNNT2P45379 298 aaPredicted RBP32.06■■■□□ 2.72
SMPD3-202ENST00000561749 AMPHP49418 695 aa32.06■■■□□ 2.72
SMPD3-202ENST00000561749 CRB1P82279 1406 aa32.06■■■□□ 2.72
SMPD3-202ENST00000561749 WDR17Q8IZU2 1322 aa32.05■■■□□ 2.72
SMPD3-202ENST00000561749 TOM1L2Q6ZVM7 507 aa32.05■■■□□ 2.72
SMPD3-202ENST00000561749 SEPT12Q8IYM1 358 aa32.05■■■□□ 2.72
SMPD3-202ENST00000561749 IP6K1Q92551 441 aa32.05■■■□□ 2.72
SMPD3-202ENST00000561749 NSD2O96028 1365 aa32.05■■■□□ 2.72
SMPD3-202ENST00000561749 THSD7AQ9UPZ6 1657 aa32.03■■■□□ 2.72
SMPD3-202ENST00000561749 HOXC9P31274 260 aa32.03■■■□□ 2.72
SMPD3-202ENST00000561749 SOCS7O14512 581 aa32.02■■■□□ 2.72
SMPD3-202ENST00000561749 PER1O15534 1290 aaPredicted RBP32.02■■■□□ 2.72
SMPD3-202ENST00000561749 AMER1Q5JTC6 1135 aaPredicted RBP32.02■■■□□ 2.72
SMPD3-202ENST00000561749 LTV1Q96GA3 475 aaPredicted RBP32.02■■■□□ 2.72
SMPD3-202ENST00000561749 WNK3Q9BYP7 1800 aa32.02■■■□□ 2.72
SMPD3-202ENST00000561749 RGPD2P0DJD1 1756 aa32.02■■■□□ 2.72
SMPD3-202ENST00000561749 BLMP54132 1417 aaPredicted RBP32.01■■■□□ 2.72
SMPD3-202ENST00000561749 ANKRD24Q8TF21 1146 aa32.01■■■□□ 2.71
SMPD3-202ENST00000561749 EMILIN1Q9Y6C2 1016 aa32.01■■■□□ 2.71
SMPD3-202ENST00000561749 ERBB3P21860 1342 aa32■■■□□ 2.71
SMPD3-202ENST00000561749 ONECUT3O60422 494 aaPredicted RBP32■■■□□ 2.71
SMPD3-202ENST00000561749 CNGB1Q14028 1251 aaPredicted RBP32■■■□□ 2.71
SMPD3-202ENST00000561749 TCP11L2Q8N4U5 519 aa32■■■□□ 2.71
SMPD3-202ENST00000561749 RTL1A6NKG5 1358 aa31.99■■■□□ 2.71
SMPD3-202ENST00000561749 MORC1Q86VD1 984 aa31.99■■■□□ 2.71
SMPD3-202ENST00000561749 FAM208AQ9UK61 1670 aaKnown RBP31.97■■■□□ 2.71
SMPD3-202ENST00000561749 PPM1GO15355 546 aaPredicted RBP31.97■■■□□ 2.71
SMPD3-202ENST00000561749 CC2D1BQ5T0F9 858 aaKnown RBP31.97■■■□□ 2.71
SMPD3-202ENST00000561749 NLRP2Q9NX02 1062 aa31.96■■■□□ 2.71
SMPD3-202ENST00000561749 BARGINQ6ZT62 677 aa31.95■■■□□ 2.71
SMPD3-202ENST00000561749 FLT4P35916 1363 aa31.94■■■□□ 2.7
SMPD3-202ENST00000561749 CARD10Q9BWT7 1032 aa31.94■■■□□ 2.7
SMPD3-202ENST00000561749 HSP90AB2PQ58FF8 381 aa31.93■■■□□ 2.7
SMPD3-202ENST00000561749 POLKQ9UBT6 870 aa31.93■■■□□ 2.7
SMPD3-202ENST00000561749 THRAP3Q9Y2W1 955 aaKnown RBP31.93■■■□□ 2.7
SMPD3-202ENST00000561749 PARP4Q9UKK3 1724 aaKnown RBP31.92■■■□□ 2.7
SMPD3-202ENST00000561749 KIF24Q5T7B8 1368 aa31.9■■■□□ 2.7
SMPD3-202ENST00000561749 KRT27Q7Z3Y8 459 aa31.89■■■□□ 2.7
SMPD3-202ENST00000561749 INSRP06213 1382 aa31.89■■■□□ 2.7
SMPD3-202ENST00000561749 LRRC37A3O60309 1634 aa31.88■■■□□ 2.69
SMPD3-202ENST00000561749 SMG6Q86US8 1419 aaKnown RBP31.86■■■□□ 2.69
SMPD3-202ENST00000561749 NPC1L1Q9UHC9 1359 aa31.85■■■□□ 2.69
SMPD3-202ENST00000561749 FAM182BQ5T319 152 aa31.84■■■□□ 2.69
SMPD3-202ENST00000561749 DISP2A7MBM2 1401 aa31.83■■■□□ 2.69
SMPD3-202ENST00000561749 DDX10Q13206 875 aaKnown RBP31.83■■■□□ 2.69
SMPD3-202ENST00000561749 USHBP1Q8N6Y0 703 aa31.81■■■□□ 2.68
SMPD3-202ENST00000561749 NBPF6Q5VWK0 638 aa31.8■■■□□ 2.68
SMPD3-202ENST00000561749 UPF1Q92900 1129 aaKnown RBP eCLIP31.8■■■□□ 2.68
SMPD3-202ENST00000561749 NBPF4Q96M43 638 aa31.8■■■□□ 2.68
SMPD3-202ENST00000561749 PDE3BQ13370 1112 aa31.79■■■□□ 2.68
SMPD3-202ENST00000561749 DDB1Q16531 1140 aa31.77■■■□□ 2.68
SMPD3-202ENST00000561749 CDCA7Q9BWT1 371 aaPredicted RBP31.77■■■□□ 2.68
SMPD3-202ENST00000561749 IL2RBP14784 551 aa31.76■■■□□ 2.67
SMPD3-202ENST00000561749 EIF4A2Q14240 407 aaKnown RBP31.74■■■□□ 2.67
SMPD3-202ENST00000561749 MTHFSP49914 203 aa31.73■■■□□ 2.67
SMPD3-202ENST00000561749 MEGF6O75095 1541 aa31.71■■■□□ 2.67
SMPD3-202ENST00000561749 TNS2Q63HR2 1409 aa31.71■■■□□ 2.67
SMPD3-202ENST00000561749 EXOC5O00471 708 aa31.7■■■□□ 2.67
SMPD3-202ENST00000561749 EYA1Q99502 592 aa31.69■■■□□ 2.66
SMPD3-202ENST00000561749 ZNF316A6NFI3 1004 aaPredicted RBP31.68■■■□□ 2.66
SMPD3-202ENST00000561749 SHANK3Q9BYB0 1731 aa31.67■■■□□ 2.66
SMPD3-202ENST00000561749 MARCH10Q8NA82 808 aaPredicted RBP31.66■■■□□ 2.66
SMPD3-202ENST00000561749 FAM196AQ6ZSG2 479 aa31.65■■■□□ 2.66
SMPD3-202ENST00000561749 RGPD1P0DJD0 1748 aa31.65■■■□□ 2.66
SMPD3-202ENST00000561749 SBF2Q86WG5 1849 aa31.65■■■□□ 2.66
SMPD3-202ENST00000561749 NCAPD2Q15021 1401 aa31.65■■■□□ 2.66
SMPD3-202ENST00000561749 RAPGEF4Q8WZA2 1011 aa31.64■■■□□ 2.66
SMPD3-202ENST00000561749 OVOS2A0A0G2JMS6 1433 aa31.64■■■□□ 2.66
SMPD3-202ENST00000561749 TNS1Q9HBL0 1735 aaKnown RBP31.62■■■□□ 2.65
SMPD3-202ENST00000561749 TATP17735 454 aaPredicted RBP31.61■■■□□ 2.65
SMPD3-202ENST00000561749 PPP2R1AP30153 589 aa31.61■■■□□ 2.65
SMPD3-202ENST00000561749 EP400Q96L91 3159 aa31.6■■■□□ 2.65
SMPD3-202ENST00000561749 IGSF1Q8N6C5 1336 aa31.6■■■□□ 2.65
SMPD3-202ENST00000561749 PARD3Q8TEW0 1356 aa31.59■■■□□ 2.65
SMPD3-202ENST00000561749 TRIM37O94972 964 aa31.59■■■□□ 2.65
SMPD3-202ENST00000561749 IL13P35225 146 aa31.59■■■□□ 2.65
SMPD3-202ENST00000561749 DDX54Q8TDD1 881 aaKnown RBP31.59■■■□□ 2.65
SMPD3-202ENST00000561749 COL3A1P02461 1466 aaPredicted RBP31.59■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms