RNA–Protein interactions for RNA: ENST00000561662.1

COMMD4-204, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 482 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-204ENST00000561662 RGPD4Q7Z3J3 1758 aa26.57■■□□□ 1.84
COMMD4-204ENST00000561662 STAC3Q96MF2 364 aa26.57■■□□□ 1.84
COMMD4-204ENST00000561662 NBPF1Q3BBV0 1214 aa26.56■■□□□ 1.84
COMMD4-204ENST00000561662 FHDC1Q9C0D6 1143 aaPredicted RBP26.56■■□□□ 1.84
COMMD4-204ENST00000561662 AXIN2Q9Y2T1 843 aa26.56■■□□□ 1.84
COMMD4-204ENST00000561662 AATKQ6ZMQ8 1374 aa26.55■■□□□ 1.84
COMMD4-204ENST00000561662 TXNRD1Q16881 649 aa26.53■■□□□ 1.84
COMMD4-204ENST00000561662 SYT17Q9BSW7 474 aa26.53■■□□□ 1.84
COMMD4-204ENST00000561662 STK32BQ9NY57 414 aa26.53■■□□□ 1.84
COMMD4-204ENST00000561662 SENP3-EIF4A1A0A087X0R7 540 aa26.52■■□□□ 1.84
COMMD4-204ENST00000561662 SOX12O15370 315 aa26.52■■□□□ 1.84
COMMD4-204ENST00000561662 CABP1Q9NZU7 370 aa26.52■■□□□ 1.84
COMMD4-204ENST00000561662 WDR17Q8IZU2 1322 aa26.5■■□□□ 1.83
COMMD4-204ENST00000561662 SLC15A2Q16348 729 aa26.49■■□□□ 1.83
COMMD4-204ENST00000561662 SLIT3O75094 1523 aa26.49■■□□□ 1.83
COMMD4-204ENST00000561662 USP6P35125 1406 aa26.48■■□□□ 1.83
COMMD4-204ENST00000561662 CSB-PGBD3P0DP91 1061 aa26.48■■□□□ 1.83
COMMD4-204ENST00000561662 CENPJQ9HC77 1338 aaPredicted RBP26.47■■□□□ 1.83
COMMD4-204ENST00000561662 WNK3Q9BYP7 1800 aa26.47■■□□□ 1.83
COMMD4-204ENST00000561662 COL18A1P39060 1754 aa26.47■■□□□ 1.83
COMMD4-204ENST00000561662 AKAP12Q02952 1782 aa26.46■■□□□ 1.83
COMMD4-204ENST00000561662 MTFR1LQ9H019 292 aa26.44■■□□□ 1.82
COMMD4-204ENST00000561662 PIK3C2AO00443 1686 aa26.44■■□□□ 1.82
COMMD4-204ENST00000561662 CPSF1Q10570 1443 aaKnown RBP26.43■■□□□ 1.82
COMMD4-204ENST00000561662 ACSBG1Q96GR2 724 aa26.43■■□□□ 1.82
COMMD4-204ENST00000561662 SGIP1Q9BQI5 828 aa26.43■■□□□ 1.82
COMMD4-204ENST00000561662 CDCA7Q9BWT1 371 aaPredicted RBP26.43■■□□□ 1.82
COMMD4-204ENST00000561662 EXOC5O00471 708 aa26.42■■□□□ 1.82
COMMD4-204ENST00000561662 C1QTNF8P60827 252 aa26.42■■□□□ 1.82
COMMD4-204ENST00000561662 RGPD5Q99666 1765 aa26.42■■□□□ 1.82
COMMD4-204ENST00000561662 BRD4O60885 1362 aaPredicted RBP26.42■■□□□ 1.82
COMMD4-204ENST00000561662 BCL9O00512 1426 aa26.41■■□□□ 1.82
COMMD4-204ENST00000561662 ARHGEF25Q86VW2 580 aa26.41■■□□□ 1.82
COMMD4-204ENST00000561662 CARD10Q9BWT7 1032 aa26.41■■□□□ 1.82
COMMD4-204ENST00000561662 KIAA1210Q9ULL0 1709 aa26.4■■□□□ 1.82
COMMD4-204ENST00000561662 ARXQ96QS3 562 aa26.39■■□□□ 1.82
COMMD4-204ENST00000561662 QRICH2Q9H0J4 1663 aa26.38■■□□□ 1.81
COMMD4-204ENST00000561662 CHD4Q14839 1912 aa26.37■■□□□ 1.81
COMMD4-204ENST00000561662 KLHL34Q8N239 644 aa26.36■■□□□ 1.81
COMMD4-204ENST00000561662 TTC21BQ7Z4L5 1316 aa26.36■■□□□ 1.81
COMMD4-204ENST00000561662 GOLGB1Q14789 3259 aaKnown RBP26.34■■□□□ 1.81
COMMD4-204ENST00000561662 GPR162Q16538 588 aa26.34■■□□□ 1.81
COMMD4-204ENST00000561662 ZNF827Q17R98 1081 aa26.34■■□□□ 1.81
COMMD4-204ENST00000561662 TNS2Q63HR2 1409 aa26.32■■□□□ 1.8
COMMD4-204ENST00000561662 PELP1Q8IZL8 1130 aaKnown RBP26.32■■□□□ 1.8
COMMD4-204ENST00000561662 KCNH5Q8NCM2 988 aa26.32■■□□□ 1.8
COMMD4-204ENST00000561662 NHSQ6T4R5 1651 aa26.3■■□□□ 1.8
COMMD4-204ENST00000561662 CCDC7Q96M83 1385 aa26.3■■□□□ 1.8
COMMD4-204ENST00000561662 LRRC4BQ9NT99 713 aa26.28■■□□□ 1.8
COMMD4-204ENST00000561662 NLRP2Q9NX02 1062 aa26.28■■□□□ 1.8
COMMD4-204ENST00000561662 EVC2Q86UK5 1308 aa26.28■■□□□ 1.8
COMMD4-204ENST00000561662 NFAT5O94916 1531 aa26.28■■□□□ 1.8
COMMD4-204ENST00000561662 PAPPAQ13219 1627 aa26.27■■□□□ 1.8
COMMD4-204ENST00000561662 TRPM1Q7Z4N2 1603 aa26.27■■□□□ 1.8
COMMD4-204ENST00000561662 GIGYF1O75420 1035 aaPredicted RBP26.25■■□□□ 1.79
COMMD4-204ENST00000561662 KAT6BQ8WYB5 2073 aa26.24■■□□□ 1.79
COMMD4-204ENST00000561662 MAP3K5Q99683 1374 aa26.24■■□□□ 1.79
COMMD4-204ENST00000561662 ZNF692Q9BU19 519 aaPredicted RBP26.24■■□□□ 1.79
COMMD4-204ENST00000561662 BTAF1O14981 1849 aa26.23■■□□□ 1.79
COMMD4-204ENST00000561662 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.23■■□□□ 1.79
COMMD4-204ENST00000561662 TTC21AQ8NDW8 1320 aa26.22■■□□□ 1.79
COMMD4-204ENST00000561662 KCNQ4P56696 695 aa26.22■■□□□ 1.79
COMMD4-204ENST00000561662 ABCC6O95255 1503 aa26.22■■□□□ 1.79
COMMD4-204ENST00000561662 KTN1Q86UP2 1357 aaKnown RBP26.21■■□□□ 1.79
COMMD4-204ENST00000561662 IL2RBP14784 551 aa26.21■■□□□ 1.79
COMMD4-204ENST00000561662 CEP350Q5VT06 3117 aa26.21■■□□□ 1.79
COMMD4-204ENST00000561662 ERBB3P21860 1342 aa26.2■■□□□ 1.79
COMMD4-204ENST00000561662 NLGN2Q8NFZ4 835 aa26.2■■□□□ 1.78
COMMD4-204ENST00000561662 IFFO2Q5TF58 517 aa26.19■■□□□ 1.78
COMMD4-204ENST00000561662 AKT1S1Q96B36 256 aa26.18■■□□□ 1.78
COMMD4-204ENST00000561662 POLD1P28340 1107 aa26.17■■□□□ 1.78
COMMD4-204ENST00000561662 PNPLA7Q6ZV29 1317 aa26.16■■□□□ 1.78
COMMD4-204ENST00000561662 NME9Q86XW9 330 aa26.16■■□□□ 1.78
COMMD4-204ENST00000561662 DDX54Q8TDD1 881 aaKnown RBP26.16■■□□□ 1.78
COMMD4-204ENST00000561662 ANKRD24Q8TF21 1146 aa26.16■■□□□ 1.78
COMMD4-204ENST00000561662 L3MBTL2Q969R5 705 aa26.15■■□□□ 1.78
COMMD4-204ENST00000561662 TRIM26Q12899 539 aaPredicted RBP26.14■■□□□ 1.78
COMMD4-204ENST00000561662 TFCP2L1Q9NZI6 479 aa26.14■■□□□ 1.78
COMMD4-204ENST00000561662 SHANK3Q9BYB0 1731 aa26.12■■□□□ 1.77
COMMD4-204ENST00000561662 SYTL4Q96C24 671 aaPredicted RBP26.12■■□□□ 1.77
COMMD4-204ENST00000561662 YBX3P16989 372 aaKnown RBP eCLIP26.11■■□□□ 1.77
COMMD4-204ENST00000561662 SLC16A10Q8TF71 515 aa26.11■■□□□ 1.77
COMMD4-204ENST00000561662 LTV1Q96GA3 475 aaPredicted RBP26.1■■□□□ 1.77
COMMD4-204ENST00000561662 LTN1O94822 1766 aa26.1■■□□□ 1.77
COMMD4-204ENST00000561662 ROCK2O75116 1388 aaKnown RBP26.08■■□□□ 1.77
COMMD4-204ENST00000561662 SLC27A3Q5K4L6 730 aa26.08■■□□□ 1.77
COMMD4-204ENST00000561662 TUBGCP6Q96RT7 1819 aa26.08■■□□□ 1.77
COMMD4-204ENST00000561662 USP31Q70CQ4 1352 aa26.07■■□□□ 1.76
COMMD4-204ENST00000561662 MSH5O43196 834 aa26.07■■□□□ 1.76
COMMD4-204ENST00000561662 MON2Q7Z3U7 1717 aa26.07■■□□□ 1.76
COMMD4-204ENST00000561662 PRIM1P49642 420 aaKnown RBP26.06■■□□□ 1.76
COMMD4-204ENST00000561662 TMC1Q8TDI8 760 aa26.05■■□□□ 1.76
COMMD4-204ENST00000561662 SBNO2Q9Y2G9 1366 aa26.05■■□□□ 1.76
COMMD4-204ENST00000561662 MSL1Q68DK7 614 aa26.04■■□□□ 1.76
COMMD4-204ENST00000561662 QSER1Q2KHR3 1735 aa26.03■■□□□ 1.76
COMMD4-204ENST00000561662 SIN3AQ96ST3 1273 aa26.02■■□□□ 1.76
COMMD4-204ENST00000561662 CD163L1Q9NR16 1453 aa26.02■■□□□ 1.76
COMMD4-204ENST00000561662 COL24A1Q17RW2 1714 aa26.02■■□□□ 1.76
COMMD4-204ENST00000561662 GRIN3BO60391 1043 aa26■■□□□ 1.75
COMMD4-204ENST00000561662 ATP10DQ9P241 1426 aa25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms