RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 TTC21BQ7Z4L5 1316 aa12.09□□□□□ -0.47
PALB2-202ENST00000561514 WDR17Q8IZU2 1322 aa12.09□□□□□ -0.47
PALB2-202ENST00000561514 TTC21AQ8NDW8 1320 aa12.09□□□□□ -0.47
PALB2-202ENST00000561514 ROCK2O75116 1388 aaKnown RBP12.08□□□□□ -0.48
PALB2-202ENST00000561514 NFAT5O94916 1531 aa12.08□□□□□ -0.48
PALB2-202ENST00000561514 LRRC37A3O60309 1634 aa12.08□□□□□ -0.48
PALB2-202ENST00000561514 NCBP3Q53F19 620 aaKnown RBP12.07□□□□□ -0.48
PALB2-202ENST00000561514 NUP188Q5SRE5 1749 aa12.07□□□□□ -0.48
PALB2-202ENST00000561514 CDCA7Q9BWT1 371 aaPredicted RBP12.07□□□□□ -0.48
PALB2-202ENST00000561514 AXIN2Q9Y2T1 843 aa12.07□□□□□ -0.48
PALB2-202ENST00000561514 RGPD3A6NKT7 1758 aaPredicted RBP12.07□□□□□ -0.48
PALB2-202ENST00000561514 RGPD4Q7Z3J3 1758 aa12.07□□□□□ -0.48
PALB2-202ENST00000561514 USP31Q70CQ4 1352 aa12.06□□□□□ -0.48
PALB2-202ENST00000561514 PLSCR1O15162 318 aa12.06□□□□□ -0.48
PALB2-202ENST00000561514 KCNH5Q8NCM2 988 aa12.06□□□□□ -0.48
PALB2-202ENST00000561514 SIN3AQ96ST3 1273 aa12.05□□□□□ -0.48
PALB2-202ENST00000561514 CARD10Q9BWT7 1032 aa12.05□□□□□ -0.48
PALB2-202ENST00000561514 CD163L1Q9NR16 1453 aa12.04□□□□□ -0.48
PALB2-202ENST00000561514 DDB1Q16531 1140 aa12.04□□□□□ -0.48
PALB2-202ENST00000561514 BCL11BQ9C0K0 894 aaPredicted RBP12.04□□□□□ -0.48
PALB2-202ENST00000561514 USP54Q70EL1 1684 aa12.03□□□□□ -0.48
PALB2-202ENST00000561514 NBPF14Q5TI25 921 aa12.03□□□□□ -0.48
PALB2-202ENST00000561514 TOM1L2Q6ZVM7 507 aa12.03□□□□□ -0.48
PALB2-202ENST00000561514 MARCH10Q8NA82 808 aaPredicted RBP12.03□□□□□ -0.48
PALB2-202ENST00000561514 CCDC7Q96M83 1385 aa12.03□□□□□ -0.48
PALB2-202ENST00000561514 TNS2Q63HR2 1409 aa12.03□□□□□ -0.48
PALB2-202ENST00000561514 AKAP12Q02952 1782 aa12.02□□□□□ -0.48
PALB2-202ENST00000561514 KTN1Q86UP2 1357 aaKnown RBP12.02□□□□□ -0.49
PALB2-202ENST00000561514 PUS7Q96PZ0 661 aaKnown RBP12.01□□□□□ -0.49
PALB2-202ENST00000561514 ANO8Q9HCE9 1232 aaPredicted RBP12.01□□□□□ -0.49
PALB2-202ENST00000561514 NINLQ9Y2I6 1382 aa12.01□□□□□ -0.49
PALB2-202ENST00000561514 WNK3Q9BYP7 1800 aa12□□□□□ -0.49
PALB2-202ENST00000561514 PTF1AQ7RTS3 328 aa12□□□□□ -0.49
PALB2-202ENST00000561514 PROM2Q8N271 834 aa12□□□□□ -0.49
PALB2-202ENST00000561514 ERBB3P21860 1342 aa12□□□□□ -0.49
PALB2-202ENST00000561514 MON2Q7Z3U7 1717 aa12□□□□□ -0.49
PALB2-202ENST00000561514 KCNQ2O43526 872 aa11.99□□□□□ -0.49
PALB2-202ENST00000561514 SPON1Q9HCB6 807 aa11.99□□□□□ -0.49
PALB2-202ENST00000561514 EDC4Q6P2E9 1401 aaKnown RBP11.99□□□□□ -0.49
PALB2-202ENST00000561514 ZBTB7CA1YPR0 619 aa11.98□□□□□ -0.49
PALB2-202ENST00000561514 CASZ1Q86V15 1759 aa11.97□□□□□ -0.49
PALB2-202ENST00000561514 NEUROD1Q13562 356 aa11.97□□□□□ -0.49
PALB2-202ENST00000561514 CNKSR2Q8WXI2 1034 aa11.97□□□□□ -0.49
PALB2-202ENST00000561514 SBF2Q86WG5 1849 aa11.97□□□□□ -0.49
PALB2-202ENST00000561514 CSB-PGBD3P0DP91 1061 aa11.96□□□□□ -0.49
PALB2-202ENST00000561514 NME9Q86XW9 330 aa11.96□□□□□ -0.49
PALB2-202ENST00000561514 CARD11Q9BXL7 1154 aa11.96□□□□□ -0.49
PALB2-202ENST00000561514 A0A1W2PP64 1363 aa11.95□□□□□ -0.5
PALB2-202ENST00000561514 EXOC5O00471 708 aa11.95□□□□□ -0.5
PALB2-202ENST00000561514 TXNRD1Q16881 649 aa11.95□□□□□ -0.5
PALB2-202ENST00000561514 NPM3O75607 178 aaKnown RBP11.94□□□□□ -0.5
PALB2-202ENST00000561514 PTGER2P43116 358 aa11.94□□□□□ -0.5
PALB2-202ENST00000561514 TESK2Q96S53 571 aa11.94□□□□□ -0.5
PALB2-202ENST00000561514 PAPPAQ13219 1627 aa11.93□□□□□ -0.5
PALB2-202ENST00000561514 SOX12O15370 315 aa11.93□□□□□ -0.5
PALB2-202ENST00000561514 HDGFL2Q7Z4V5 671 aaPredicted RBP11.93□□□□□ -0.5
PALB2-202ENST00000561514 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.93□□□□□ -0.5
PALB2-202ENST00000561514 SLC12A5Q9H2X9 1139 aa11.93□□□□□ -0.5
PALB2-202ENST00000561514 NHSQ6T4R5 1651 aa11.93□□□□□ -0.5
PALB2-202ENST00000561514 IL2RBP14784 551 aa11.92□□□□□ -0.5
PALB2-202ENST00000561514 SLC15A2Q16348 729 aa11.92□□□□□ -0.5
PALB2-202ENST00000561514 SGIP1Q9BQI5 828 aa11.92□□□□□ -0.5
PALB2-202ENST00000561514 PDGFDQ9GZP0 370 aaPredicted RBP11.92□□□□□ -0.5
PALB2-202ENST00000561514 TERF2IPQ9NYB0 399 aa11.92□□□□□ -0.5
PALB2-202ENST00000561514 ANKRD24Q8TF21 1146 aa11.91□□□□□ -0.5
PALB2-202ENST00000561514 IP6K1Q92551 441 aa11.91□□□□□ -0.5
PALB2-202ENST00000561514 NLRP2Q9NX02 1062 aa11.91□□□□□ -0.5
PALB2-202ENST00000561514 STK32BQ9NY57 414 aa11.91□□□□□ -0.5
PALB2-202ENST00000561514 TONSLQ96HA7 1378 aa11.91□□□□□ -0.5
PALB2-202ENST00000561514 PPP1R1BQ9UD71 204 aaPredicted RBP11.9□□□□□ -0.5
PALB2-202ENST00000561514 MAP3K5Q99683 1374 aa11.9□□□□□ -0.5
PALB2-202ENST00000561514 RGPD5Q99666 1765 aa11.9□□□□□ -0.51
PALB2-202ENST00000561514 SLC24A1O60721 1099 aa11.89□□□□□ -0.51
PALB2-202ENST00000561514 TMC1Q8TDI8 760 aa11.89□□□□□ -0.51
PALB2-202ENST00000561514 MTFR1LQ9H019 292 aa11.89□□□□□ -0.51
PALB2-202ENST00000561514 RTL1A6NKG5 1358 aa11.89□□□□□ -0.51
PALB2-202ENST00000561514 ZBTB7AO95365 584 aa11.88□□□□□ -0.51
PALB2-202ENST00000561514 YY1P25490 414 aa11.88□□□□□ -0.51
PALB2-202ENST00000561514 ANKRD36BQ8N2N9 1353 aa11.88□□□□□ -0.51
PALB2-202ENST00000561514 MYOM1P52179 1685 aa11.87□□□□□ -0.51
PALB2-202ENST00000561514 MAP3K19Q56UN5 1328 aa11.86□□□□□ -0.51
PALB2-202ENST00000561514 UTRNP46939 3433 aa11.86□□□□□ -0.51
PALB2-202ENST00000561514 ST20-MTHFSA0A0A6YYL1 179 aa11.86□□□□□ -0.51
PALB2-202ENST00000561514 HOXC9P31274 260 aa11.86□□□□□ -0.51
PALB2-202ENST00000561514 ACSBG1Q96GR2 724 aa11.86□□□□□ -0.51
PALB2-202ENST00000561514 LRRC4BQ9NT99 713 aa11.86□□□□□ -0.51
PALB2-202ENST00000561514 NSD2O96028 1365 aa11.86□□□□□ -0.51
PALB2-202ENST00000561514 FAM208AQ9UK61 1670 aaKnown RBP11.86□□□□□ -0.51
PALB2-202ENST00000561514 LTN1O94822 1766 aa11.86□□□□□ -0.51
PALB2-202ENST00000561514 ZNF827Q17R98 1081 aa11.85□□□□□ -0.51
PALB2-202ENST00000561514 SLC27A3Q5K4L6 730 aa11.85□□□□□ -0.51
PALB2-202ENST00000561514 AKT1S1Q96B36 256 aa11.85□□□□□ -0.51
PALB2-202ENST00000561514 COG3Q96JB2 828 aa11.85□□□□□ -0.51
PALB2-202ENST00000561514 SYT17Q9BSW7 474 aa11.84□□□□□ -0.51
PALB2-202ENST00000561514 ATF5Q9Y2D1 282 aaPredicted RBP11.84□□□□□ -0.51
PALB2-202ENST00000561514 MEGF6O75095 1541 aa11.84□□□□□ -0.51
PALB2-202ENST00000561514 KIF24Q5T7B8 1368 aa11.83□□□□□ -0.52
PALB2-202ENST00000561514 DCAF8L1A6NGE4 600 aa11.83□□□□□ -0.52
PALB2-202ENST00000561514 FHDC1Q9C0D6 1143 aaPredicted RBP11.83□□□□□ -0.52
PALB2-202ENST00000561514 BTAF1O14981 1849 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms