RNA–Protein interactions for RNA: ENST00000561377.1

HMBOX1-216, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 307 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-216ENST00000561377 TERTO14746 1132 aaKnown RBP11.48□□□□□ -0.57
HMBOX1-216ENST00000561377 CCDC116Q8IYX3 515 aa11.48□□□□□ -0.57
HMBOX1-216ENST00000561377 PURBQ96QR8 312 aaKnown RBP11.48□□□□□ -0.57
HMBOX1-216ENST00000561377 HMX1Q9NP08 348 aaPredicted RBP11.48□□□□□ -0.57
HMBOX1-216ENST00000561377 EMILIN1Q9Y6C2 1016 aa11.48□□□□□ -0.57
HMBOX1-216ENST00000561377 UPP2O95045 317 aa11.46□□□□□ -0.57
HMBOX1-216ENST00000561377 EPS8L1Q8TE68 723 aa11.46□□□□□ -0.57
HMBOX1-216ENST00000561377 MEIOBQ8N635 442 aa11.44□□□□□ -0.58
HMBOX1-216ENST00000561377 KCTD15Q96SI1 283 aaPredicted RBP11.44□□□□□ -0.58
HMBOX1-216ENST00000561377 NXF1Q9UBU9 619 aaKnown RBP11.44□□□□□ -0.58
HMBOX1-216ENST00000561377 ADAM32Q8TC27 787 aa11.43□□□□□ -0.58
HMBOX1-216ENST00000561377 SLC16A10Q8TF71 515 aa11.43□□□□□ -0.58
HMBOX1-216ENST00000561377 PGPEP1Q9NXJ5 209 aa11.43□□□□□ -0.58
HMBOX1-216ENST00000561377 DHX9Q08211 1270 aaKnown RBP11.42□□□□□ -0.58
HMBOX1-216ENST00000561377 C6orf118Q5T5N4 469 aa11.42□□□□□ -0.58
HMBOX1-216ENST00000561377 NPAS3Q8IXF0 933 aa11.42□□□□□ -0.58
HMBOX1-216ENST00000561377 LINC00528Q8N1L1 170 aa11.42□□□□□ -0.58
HMBOX1-216ENST00000561377 OCSTAMPQ9BR26 566 aa11.42□□□□□ -0.58
HMBOX1-216ENST00000561377 BMP2P12643 396 aa11.41□□□□□ -0.58
HMBOX1-216ENST00000561377 PPP1R26Q5T8A7 1209 aaPredicted RBP11.41□□□□□ -0.58
HMBOX1-216ENST00000561377 NBPF20Q3BBV1 942 aa11.4□□□□□ -0.58
HMBOX1-216ENST00000561377 TSEN34Q9BSV6 310 aaKnown RBP11.4□□□□□ -0.58
HMBOX1-216ENST00000561377 TRIM34Q9BYJ4 488 aa11.4□□□□□ -0.58
HMBOX1-216ENST00000561377 INTS6LQ5JSJ4 861 aaKnown RBP11.38□□□□□ -0.59
HMBOX1-216ENST00000561377 DZIP3Q86Y13 1208 aaKnown RBP11.38□□□□□ -0.59
HMBOX1-216ENST00000561377 WIPF1O43516 503 aa11.37□□□□□ -0.59
HMBOX1-216ENST00000561377 MAN1A2O60476 641 aa11.37□□□□□ -0.59
HMBOX1-216ENST00000561377 SOBPA7XYQ1 873 aa11.35□□□□□ -0.59
HMBOX1-216ENST00000561377 BANK1Q8NDB2 785 aa11.35□□□□□ -0.59
HMBOX1-216ENST00000561377 Q6ZVU0 165 aa11.34□□□□□ -0.59
HMBOX1-216ENST00000561377 IRF7Q92985 503 aa11.34□□□□□ -0.59
HMBOX1-216ENST00000561377 GJD4Q96KN9 370 aaPredicted RBP11.34□□□□□ -0.59
HMBOX1-216ENST00000561377 H3BM21 787 aa11.33□□□□□ -0.6
HMBOX1-216ENST00000561377 INSM1Q01101 510 aaPredicted RBP11.33□□□□□ -0.6
HMBOX1-216ENST00000561377 CBLBQ13191 982 aa11.33□□□□□ -0.6
HMBOX1-216ENST00000561377 LCE2CQ5TA81 110 aa11.33□□□□□ -0.6
HMBOX1-216ENST00000561377 SOS2Q07890 1332 aaPredicted RBP11.33□□□□□ -0.6
HMBOX1-216ENST00000561377 ZBBXA8MT70 800 aa11.32□□□□□ -0.6
HMBOX1-216ENST00000561377 SOCS7O14512 581 aa11.32□□□□□ -0.6
HMBOX1-216ENST00000561377 VEGFBP49765 207 aa11.32□□□□□ -0.6
HMBOX1-216ENST00000561377 APBB1O00213 710 aa11.3□□□□□ -0.6
HMBOX1-216ENST00000561377 RAB15P59190 212 aa11.3□□□□□ -0.6
HMBOX1-216ENST00000561377 SEPT12Q8IYM1 358 aa11.3□□□□□ -0.6
HMBOX1-216ENST00000561377 TRIM52Q96A61 297 aa11.3□□□□□ -0.6
HMBOX1-216ENST00000561377 TTLL8A6PVC2 850 aa11.29□□□□□ -0.6
HMBOX1-216ENST00000561377 ESPNB1AK53 854 aa11.29□□□□□ -0.6
HMBOX1-216ENST00000561377 SPINT1O43278 529 aa11.28□□□□□ -0.6
HMBOX1-216ENST00000561377 DNMT3LQ9UJW3 386 aa11.28□□□□□ -0.6
HMBOX1-216ENST00000561377 PCDHB9Q9Y5E1 797 aa11.28□□□□□ -0.6
HMBOX1-216ENST00000561377 ERVH48-1M5A8F1 160 aa11.27□□□□□ -0.61
HMBOX1-216ENST00000561377 FBXO45P0C2W1 286 aa11.27□□□□□ -0.61
HMBOX1-216ENST00000561377 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.27□□□□□ -0.61
HMBOX1-216ENST00000561377 TMPRSS4Q9NRS4 437 aa11.27□□□□□ -0.61
HMBOX1-216ENST00000561377 ZNF784Q8NCA9 323 aaPredicted RBP11.26□□□□□ -0.61
HMBOX1-216ENST00000561377 ZNF592Q92610 1267 aa11.26□□□□□ -0.61
HMBOX1-216ENST00000561377 NDUFB9Q9Y6M9 179 aa11.26□□□□□ -0.61
HMBOX1-216ENST00000561377 GMPRP36959 345 aa11.25□□□□□ -0.61
HMBOX1-216ENST00000561377 MCCD1P59942 119 aaPredicted RBP11.25□□□□□ -0.61
HMBOX1-216ENST00000561377 RELBQ01201 579 aa11.25□□□□□ -0.61
HMBOX1-216ENST00000561377 MTMR14Q8NCE2 650 aa11.25□□□□□ -0.61
HMBOX1-216ENST00000561377 ZNF330Q9Y3S2 320 aaPredicted RBP11.25□□□□□ -0.61
HMBOX1-216ENST00000561377 NR1H3Q13133 447 aa11.24□□□□□ -0.61
HMBOX1-216ENST00000561377 AGBL1Q96MI9 1066 aa11.24□□□□□ -0.61
HMBOX1-216ENST00000561377 ERBB4Q15303 1308 aa11.24□□□□□ -0.61
HMBOX1-216ENST00000561377 PPFIA3O75145 1194 aa11.23□□□□□ -0.61
HMBOX1-216ENST00000561377 ADH1AP07327 375 aa11.23□□□□□ -0.61
HMBOX1-216ENST00000561377 CCDC125Q86Z20 511 aa11.23□□□□□ -0.61
HMBOX1-216ENST00000561377 STK17AQ9UEE5 414 aa11.23□□□□□ -0.61
HMBOX1-216ENST00000561377 FIGNL2A6NMB9 653 aa11.22□□□□□ -0.61
HMBOX1-216ENST00000561377 VSIG8P0DPA2 414 aa11.22□□□□□ -0.61
HMBOX1-216ENST00000561377 SNRKQ9NRH2 765 aa11.22□□□□□ -0.61
HMBOX1-216ENST00000561377 LILRA1O75019 489 aa11.21□□□□□ -0.61
HMBOX1-216ENST00000561377 GIGYF1O75420 1035 aaPredicted RBP11.21□□□□□ -0.61
HMBOX1-216ENST00000561377 RNF20Q5VTR2 975 aa11.21□□□□□ -0.61
HMBOX1-216ENST00000561377 POLMQ9NP87 494 aaPredicted RBP11.2□□□□□ -0.62
HMBOX1-216ENST00000561377 ADD1P35611 737 aaKnown RBP11.19□□□□□ -0.62
HMBOX1-216ENST00000561377 PTSQ03393 145 aa11.19□□□□□ -0.62
HMBOX1-216ENST00000561377 INSM2Q96T92 566 aaPredicted RBP11.19□□□□□ -0.62
HMBOX1-216ENST00000561377 ZNF395Q9H8N7 513 aaPredicted RBP11.19□□□□□ -0.62
HMBOX1-216ENST00000561377 CYLDQ9NQC7 956 aa11.19□□□□□ -0.62
HMBOX1-216ENST00000561377 PTGIRP43119 386 aa11.18□□□□□ -0.62
HMBOX1-216ENST00000561377 CTSOP43234 321 aaPredicted RBP11.18□□□□□ -0.62
HMBOX1-216ENST00000561377 PRM3Q9NNZ6 103 aa11.18□□□□□ -0.62
HMBOX1-216ENST00000561377 GPR37L1O60883 481 aa11.17□□□□□ -0.62
HMBOX1-216ENST00000561377 FAM181BA6NEQ2 426 aa11.15□□□□□ -0.62
HMBOX1-216ENST00000561377 KDF1Q8NAX2 398 aaPredicted RBP11.14□□□□□ -0.63
HMBOX1-216ENST00000561377 ZSCAN1Q8NBB4 408 aa11.14□□□□□ -0.63
HMBOX1-216ENST00000561377 RNF217Q8TC41 542 aa11.14□□□□□ -0.63
HMBOX1-216ENST00000561377 ATP5J2-PTCD1G3V325 749 aa11.13□□□□□ -0.63
HMBOX1-216ENST00000561377 CC2D2BQ6DHV5 1058 aa11.13□□□□□ -0.63
HMBOX1-216ENST00000561377 CCDC155Q8N6L0 562 aa11.13□□□□□ -0.63
HMBOX1-216ENST00000561377 SLC35F4A4IF30 521 aa11.12□□□□□ -0.63
HMBOX1-216ENST00000561377 PRKCSHP14314 528 aaPredicted RBP11.12□□□□□ -0.63
HMBOX1-216ENST00000561377 ERVK-9P63128 1117 aa11.12□□□□□ -0.63
HMBOX1-216ENST00000561377 FOXD4L5Q5VV16 416 aaPredicted RBP11.11□□□□□ -0.63
HMBOX1-216ENST00000561377 TBC1D2BQ9UPU7 963 aa11.11□□□□□ -0.63
HMBOX1-216ENST00000561377 PCDHB11Q9Y5F2 797 aa11.11□□□□□ -0.63
HMBOX1-216ENST00000561377 ESF1Q9H501 851 aaKnown RBP11.1□□□□□ -0.63
HMBOX1-216ENST00000561377 LYSMD3Q7Z3D4 306 aa11.09□□□□□ -0.63
HMBOX1-216ENST00000561377 NANOS1Q8WY41 292 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms