RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 ARHGEF25Q86VW2 580 aa13.95□□□□□ -0.18
HERC1-212ENST00000561348 CARD14Q9BXL6 1004 aa13.95□□□□□ -0.18
HERC1-212ENST00000561348 PANK3Q9H999 370 aa13.95□□□□□ -0.18
HERC1-212ENST00000561348 AXIN2Q9Y2T1 843 aa13.95□□□□□ -0.18
HERC1-212ENST00000561348 NRAPQ86VF7 1730 aa13.95□□□□□ -0.18
HERC1-212ENST00000561348 CDK12Q9NYV4 1490 aaPredicted RBP13.94□□□□□ -0.18
HERC1-212ENST00000561348 FYB1O15117 783 aa13.94□□□□□ -0.18
HERC1-212ENST00000561348 TNNT2P45379 298 aaPredicted RBP13.94□□□□□ -0.18
HERC1-212ENST00000561348 AMPHP49418 695 aa13.94□□□□□ -0.18
HERC1-212ENST00000561348 FAM182BQ5T319 152 aa13.94□□□□□ -0.18
HERC1-212ENST00000561348 USP31Q70CQ4 1352 aa13.94□□□□□ -0.18
HERC1-212ENST00000561348 PPM1GO15355 546 aaPredicted RBP13.93□□□□□ -0.18
HERC1-212ENST00000561348 CNKSR2Q8WXI2 1034 aa13.93□□□□□ -0.18
HERC1-212ENST00000561348 MYOM1P52179 1685 aa13.93□□□□□ -0.18
HERC1-212ENST00000561348 AATKQ6ZMQ8 1374 aa13.93□□□□□ -0.18
HERC1-212ENST00000561348 SPATA31A1Q5TZJ5 1347 aa13.92□□□□□ -0.18
HERC1-212ENST00000561348 RGPD5Q99666 1765 aa13.92□□□□□ -0.18
HERC1-212ENST00000561348 RRS1Q15050 365 aaKnown RBP13.92□□□□□ -0.18
HERC1-212ENST00000561348 KRT27Q7Z3Y8 459 aa13.92□□□□□ -0.18
HERC1-212ENST00000561348 NLRP2Q9NX02 1062 aa13.92□□□□□ -0.18
HERC1-212ENST00000561348 KIF7Q2M1P5 1343 aa13.91□□□□□ -0.18
HERC1-212ENST00000561348 TCP11L2Q8N4U5 519 aa13.91□□□□□ -0.18
HERC1-212ENST00000561348 UPF1Q92900 1129 aaKnown RBP eCLIP13.91□□□□□ -0.18
HERC1-212ENST00000561348 COL5A2P05997 1499 aaPredicted RBP13.91□□□□□ -0.18
HERC1-212ENST00000561348 CGNL1Q0VF96 1302 aa13.9□□□□□ -0.18
HERC1-212ENST00000561348 PDE3BQ13370 1112 aa13.9□□□□□ -0.18
HERC1-212ENST00000561348 LTN1O94822 1766 aa13.9□□□□□ -0.18
HERC1-212ENST00000561348 BRWD3Q6RI45 1802 aa13.9□□□□□ -0.18
HERC1-212ENST00000561348 KIF20BQ96Q89 1820 aa13.9□□□□□ -0.18
HERC1-212ENST00000561348 NFAT5O94916 1531 aa13.9□□□□□ -0.19
HERC1-212ENST00000561348 OVOS2A0A0J9YW53 1432 aa13.9□□□□□ -0.19
HERC1-212ENST00000561348 OVOS2Q6IE36 1432 aa13.9□□□□□ -0.19
HERC1-212ENST00000561348 LMO7Q8WWI1 1683 aa13.89□□□□□ -0.19
HERC1-212ENST00000561348 ANKRD24Q8TF21 1146 aa13.89□□□□□ -0.19
HERC1-212ENST00000561348 KNSTRNQ9Y448 316 aa13.89□□□□□ -0.19
HERC1-212ENST00000561348 CRB1P82279 1406 aa13.89□□□□□ -0.19
HERC1-212ENST00000561348 WDR17Q8IZU2 1322 aa13.89□□□□□ -0.19
HERC1-212ENST00000561348 MAP3K19Q56UN5 1328 aa13.88□□□□□ -0.19
HERC1-212ENST00000561348 SF3B2Q13435 895 aaKnown RBP13.87□□□□□ -0.19
HERC1-212ENST00000561348 COL18A1P39060 1754 aa13.86□□□□□ -0.19
HERC1-212ENST00000561348 ONECUT3O60422 494 aaPredicted RBP13.86□□□□□ -0.19
HERC1-212ENST00000561348 HOXC9P31274 260 aa13.86□□□□□ -0.19
HERC1-212ENST00000561348 IP6K1Q92551 441 aa13.86□□□□□ -0.19
HERC1-212ENST00000561348 BARGINQ6ZT62 677 aa13.85□□□□□ -0.19
HERC1-212ENST00000561348 MORC1Q86VD1 984 aa13.85□□□□□ -0.19
HERC1-212ENST00000561348 THRAP3Q9Y2W1 955 aaKnown RBP13.85□□□□□ -0.19
HERC1-212ENST00000561348 EMILIN1Q9Y6C2 1016 aa13.85□□□□□ -0.19
HERC1-212ENST00000561348 DDB1Q16531 1140 aa13.84□□□□□ -0.19
HERC1-212ENST00000561348 CC2D1BQ5T0F9 858 aaKnown RBP13.84□□□□□ -0.19
HERC1-212ENST00000561348 CARD10Q9BWT7 1032 aa13.84□□□□□ -0.19
HERC1-212ENST00000561348 ERBB3P21860 1342 aa13.84□□□□□ -0.19
HERC1-212ENST00000561348 WASHC2AQ641Q2 1341 aa13.84□□□□□ -0.19
HERC1-212ENST00000561348 CCDC7Q96M83 1385 aa13.83□□□□□ -0.19
HERC1-212ENST00000561348 USP54Q70EL1 1684 aa13.83□□□□□ -0.2
HERC1-212ENST00000561348 HSP90AB2PQ58FF8 381 aa13.83□□□□□ -0.2
HERC1-212ENST00000561348 USHBP1Q8N6Y0 703 aa13.83□□□□□ -0.2
HERC1-212ENST00000561348 EXOC5O00471 708 aa13.81□□□□□ -0.2
HERC1-212ENST00000561348 TRIM37O94972 964 aa13.81□□□□□ -0.2
HERC1-212ENST00000561348 BLMP54132 1417 aaPredicted RBP13.81□□□□□ -0.2
HERC1-212ENST00000561348 SMG6Q86US8 1419 aaKnown RBP13.81□□□□□ -0.2
HERC1-212ENST00000561348 THSD7AQ9UPZ6 1657 aa13.8□□□□□ -0.2
HERC1-212ENST00000561348 DEFB132Q7Z7B7 95 aa13.8□□□□□ -0.2
HERC1-212ENST00000561348 IL2RBP14784 551 aa13.79□□□□□ -0.2
HERC1-212ENST00000561348 FAM196AQ6ZSG2 479 aa13.79□□□□□ -0.2
HERC1-212ENST00000561348 CDCA7Q9BWT1 371 aaPredicted RBP13.79□□□□□ -0.2
HERC1-212ENST00000561348 MAP2P11137 1827 aaKnown RBP13.78□□□□□ -0.2
HERC1-212ENST00000561348 CCDC125Q86Z20 511 aa13.78□□□□□ -0.2
HERC1-212ENST00000561348 DDX54Q8TDD1 881 aaKnown RBP13.78□□□□□ -0.2
HERC1-212ENST00000561348 FLT4P35916 1363 aa13.78□□□□□ -0.2
HERC1-212ENST00000561348 RTL1A6NKG5 1358 aa13.77□□□□□ -0.21
HERC1-212ENST00000561348 ABCC6O95255 1503 aa13.77□□□□□ -0.21
HERC1-212ENST00000561348 RGPD2P0DJD1 1756 aa13.77□□□□□ -0.21
HERC1-212ENST00000561348 ZEB1P37275 1124 aaPredicted RBP13.77□□□□□ -0.21
HERC1-212ENST00000561348 NBPF6Q5VWK0 638 aa13.77□□□□□ -0.21
HERC1-212ENST00000561348 NBPF4Q96M43 638 aa13.77□□□□□ -0.21
HERC1-212ENST00000561348 POLKQ9UBT6 870 aa13.77□□□□□ -0.21
HERC1-212ENST00000561348 APBA3O96018 575 aa13.76□□□□□ -0.21
HERC1-212ENST00000561348 BAG6P46379 1132 aa13.76□□□□□ -0.21
HERC1-212ENST00000561348 RAPGEF4Q8WZA2 1011 aa13.76□□□□□ -0.21
HERC1-212ENST00000561348 KAT6BQ8WYB5 2073 aa13.76□□□□□ -0.21
HERC1-212ENST00000561348 PEAK1Q9H792 1746 aa13.76□□□□□ -0.21
HERC1-212ENST00000561348 NSD2O96028 1365 aa13.75□□□□□ -0.21
HERC1-212ENST00000561348 INSRP06213 1382 aa13.75□□□□□ -0.21
HERC1-212ENST00000561348 NPM3O75607 178 aaKnown RBP13.75□□□□□ -0.21
HERC1-212ENST00000561348 EN1Q05925 392 aaPredicted RBP13.75□□□□□ -0.21
HERC1-212ENST00000561348 AMER1Q5JTC6 1135 aaPredicted RBP13.75□□□□□ -0.21
HERC1-212ENST00000561348 MARCH10Q8NA82 808 aaPredicted RBP13.75□□□□□ -0.21
HERC1-212ENST00000561348 ACSBG1Q96GR2 724 aa13.75□□□□□ -0.21
HERC1-212ENST00000561348 ANKRD26Q9UPS8 1709 aa13.75□□□□□ -0.21
HERC1-212ENST00000561348 PARP4Q9UKK3 1724 aaKnown RBP13.74□□□□□ -0.21
HERC1-212ENST00000561348 TATP17735 454 aaPredicted RBP13.74□□□□□ -0.21
HERC1-212ENST00000561348 LRRC37A3O60309 1634 aa13.74□□□□□ -0.21
HERC1-212ENST00000561348 PER1O15534 1290 aaPredicted RBP13.73□□□□□ -0.21
HERC1-212ENST00000561348 EP400Q96L91 3159 aa13.73□□□□□ -0.21
HERC1-212ENST00000561348 WNK3Q9BYP7 1800 aa13.73□□□□□ -0.21
HERC1-212ENST00000561348 OVOS2A0A0G2JMS6 1433 aa13.73□□□□□ -0.21
HERC1-212ENST00000561348 SYTL4Q96C24 671 aaPredicted RBP13.72□□□□□ -0.21
HERC1-212ENST00000561348 FAM208AQ9UK61 1670 aaKnown RBP13.72□□□□□ -0.21
HERC1-212ENST00000561348 MTHFSP49914 203 aa13.71□□□□□ -0.21
HERC1-212ENST00000561348 DDX10Q13206 875 aaKnown RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms