RNA–Protein interactions for RNA: ENST00000561000.1

LINC01220-202, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 5

Gene LINC01220, Length 159 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-202ENST00000561000 DDB1Q16531 1140 aa26.41■■□□□ 1.82
LINC01220-202ENST00000561000 HDGFL2Q7Z4V5 671 aaPredicted RBP26.41■■□□□ 1.82
LINC01220-202ENST00000561000 NME9Q86XW9 330 aa26.39■■□□□ 1.82
LINC01220-202ENST00000561000 C11orf95C9JLR9 678 aaPredicted RBP26.37■■□□□ 1.81
LINC01220-202ENST00000561000 CARD10Q9BWT7 1032 aa26.36■■□□□ 1.81
LINC01220-202ENST00000561000 TERF2IPQ9NYB0 399 aa26.36■■□□□ 1.81
LINC01220-202ENST00000561000 TNS1Q9HBL0 1735 aaKnown RBP26.36■■□□□ 1.81
LINC01220-202ENST00000561000 CDCA7Q9BWT1 371 aaPredicted RBP26.35■■□□□ 1.81
LINC01220-202ENST00000561000 AKAP12Q02952 1782 aa26.35■■□□□ 1.81
LINC01220-202ENST00000561000 PARD3Q8TEW0 1356 aa26.34■■□□□ 1.81
LINC01220-202ENST00000561000 ST20-MTHFSA0A0A6YYL1 179 aa26.34■■□□□ 1.81
LINC01220-202ENST00000561000 USP31Q70CQ4 1352 aa26.33■■□□□ 1.81
LINC01220-202ENST00000561000 COL18A1P39060 1754 aa26.33■■□□□ 1.81
LINC01220-202ENST00000561000 PUS7Q96PZ0 661 aaKnown RBP26.33■■□□□ 1.81
LINC01220-202ENST00000561000 CD163L1Q9NR16 1453 aa26.33■■□□□ 1.81
LINC01220-202ENST00000561000 OVOS2A0A0G2JMS6 1433 aa26.32■■□□□ 1.8
LINC01220-202ENST00000561000 OVOS2A0A0J9YW53 1432 aa26.32■■□□□ 1.8
LINC01220-202ENST00000561000 OVOS2Q6IE36 1432 aa26.32■■□□□ 1.8
LINC01220-202ENST00000561000 NBPF14Q5TI25 921 aa26.32■■□□□ 1.8
LINC01220-202ENST00000561000 MARCH10Q8NA82 808 aaPredicted RBP26.31■■□□□ 1.8
LINC01220-202ENST00000561000 TESK2Q96S53 571 aa26.31■■□□□ 1.8
LINC01220-202ENST00000561000 NFAT5O94916 1531 aa26.3■■□□□ 1.8
LINC01220-202ENST00000561000 EXOC5O00471 708 aa26.3■■□□□ 1.8
LINC01220-202ENST00000561000 PARP4Q9UKK3 1724 aaKnown RBP26.3■■□□□ 1.8
LINC01220-202ENST00000561000 NLRP2Q9NX02 1062 aa26.28■■□□□ 1.8
LINC01220-202ENST00000561000 A0A1W2PP64 1363 aa26.28■■□□□ 1.8
LINC01220-202ENST00000561000 EDC4Q6P2E9 1401 aaKnown RBP26.28■■□□□ 1.8
LINC01220-202ENST00000561000 PTF1AQ7RTS3 328 aa26.27■■□□□ 1.8
LINC01220-202ENST00000561000 CCDC7Q96M83 1385 aa26.26■■□□□ 1.79
LINC01220-202ENST00000561000 SLC24A1O60721 1099 aa26.26■■□□□ 1.79
LINC01220-202ENST00000561000 BCL11BQ9C0K0 894 aaPredicted RBP26.26■■□□□ 1.79
LINC01220-202ENST00000561000 MON2Q7Z3U7 1717 aa26.25■■□□□ 1.79
LINC01220-202ENST00000561000 ANKRD24Q8TF21 1146 aa26.24■■□□□ 1.79
LINC01220-202ENST00000561000 LRP5O75197 1615 aa26.24■■□□□ 1.79
LINC01220-202ENST00000561000 ERBB3P21860 1342 aa26.23■■□□□ 1.79
LINC01220-202ENST00000561000 PLSCR1O15162 318 aa26.23■■□□□ 1.79
LINC01220-202ENST00000561000 LRRC37A3O60309 1634 aa26.23■■□□□ 1.79
LINC01220-202ENST00000561000 RGPD5Q99666 1765 aa26.2■■□□□ 1.79
LINC01220-202ENST00000561000 NINLQ9Y2I6 1382 aa26.2■■□□□ 1.78
LINC01220-202ENST00000561000 COG3Q96JB2 828 aa26.19■■□□□ 1.78
LINC01220-202ENST00000561000 PEAK1Q9H792 1746 aa26.19■■□□□ 1.78
LINC01220-202ENST00000561000 ABCC6O95255 1503 aa26.19■■□□□ 1.78
LINC01220-202ENST00000561000 IL2RBP14784 551 aa26.18■■□□□ 1.78
LINC01220-202ENST00000561000 TMF1P82094 1093 aa26.18■■□□□ 1.78
LINC01220-202ENST00000561000 LTV1Q96GA3 475 aaPredicted RBP26.18■■□□□ 1.78
LINC01220-202ENST00000561000 IP6K1Q92551 441 aa26.17■■□□□ 1.78
LINC01220-202ENST00000561000 BCL9O00512 1426 aa26.16■■□□□ 1.78
LINC01220-202ENST00000561000 KCNQ2O43526 872 aa26.15■■□□□ 1.78
LINC01220-202ENST00000561000 FBLN1P23142 703 aa26.15■■□□□ 1.78
LINC01220-202ENST00000561000 PROM2Q8N271 834 aa26.15■■□□□ 1.78
LINC01220-202ENST00000561000 ACSBG1Q96GR2 724 aa26.15■■□□□ 1.78
LINC01220-202ENST00000561000 USP47Q96K76 1375 aa26.15■■□□□ 1.78
LINC01220-202ENST00000561000 RREB1Q92766 1687 aa26.15■■□□□ 1.78
LINC01220-202ENST00000561000 AMPHP49418 695 aa26.13■■□□□ 1.77
LINC01220-202ENST00000561000 NUP188Q5SRE5 1749 aa26.13■■□□□ 1.77
LINC01220-202ENST00000561000 TNS2Q63HR2 1409 aa26.13■■□□□ 1.77
LINC01220-202ENST00000561000 USP54Q70EL1 1684 aa26.12■■□□□ 1.77
LINC01220-202ENST00000561000 ANO8Q9HCE9 1232 aaPredicted RBP26.12■■□□□ 1.77
LINC01220-202ENST00000561000 ANKRD36BQ8N2N9 1353 aa26.11■■□□□ 1.77
LINC01220-202ENST00000561000 SPON1Q9HCB6 807 aa26.11■■□□□ 1.77
LINC01220-202ENST00000561000 MAP3K19Q56UN5 1328 aa26.11■■□□□ 1.77
LINC01220-202ENST00000561000 WNK3Q9BYP7 1800 aa26.1■■□□□ 1.77
LINC01220-202ENST00000561000 TXNRD1Q16881 649 aa26.1■■□□□ 1.77
LINC01220-202ENST00000561000 GGNBP2Q9H3C7 697 aa26.09■■□□□ 1.77
LINC01220-202ENST00000561000 HOXC9P31274 260 aa26.08■■□□□ 1.77
LINC01220-202ENST00000561000 CDCA8Q53HL2 280 aa26.08■■□□□ 1.77
LINC01220-202ENST00000561000 SBF2Q86WG5 1849 aa26.07■■□□□ 1.76
LINC01220-202ENST00000561000 FYB1O15117 783 aa26.07■■□□□ 1.76
LINC01220-202ENST00000561000 DDX54Q8TDD1 881 aaKnown RBP26.07■■□□□ 1.76
LINC01220-202ENST00000561000 PPP1R1BQ9UD71 204 aaPredicted RBP26.07■■□□□ 1.76
LINC01220-202ENST00000561000 LTN1O94822 1766 aa26.07■■□□□ 1.76
LINC01220-202ENST00000561000 RRS1Q15050 365 aaKnown RBP26.05■■□□□ 1.76
LINC01220-202ENST00000561000 STK32BQ9NY57 414 aa26.05■■□□□ 1.76
LINC01220-202ENST00000561000 TIMELESSQ9UNS1 1208 aa26.04■■□□□ 1.76
LINC01220-202ENST00000561000 PDGFDQ9GZP0 370 aaPredicted RBP26.03■■□□□ 1.76
LINC01220-202ENST00000561000 SLC15A2Q16348 729 aa26.01■■□□□ 1.75
LINC01220-202ENST00000561000 RGPD3A6NKT7 1758 aaPredicted RBP26■■□□□ 1.75
LINC01220-202ENST00000561000 RGPD4Q7Z3J3 1758 aa26■■□□□ 1.75
LINC01220-202ENST00000561000 ZBTB7AO95365 584 aa25.99■■□□□ 1.75
LINC01220-202ENST00000561000 ZCRB1Q8TBF4 217 aaKnown RBP25.97■■□□□ 1.75
LINC01220-202ENST00000561000 CLSPNQ9HAW4 1339 aa25.96■■□□□ 1.75
LINC01220-202ENST00000561000 NBPF6Q5VWK0 638 aa25.96■■□□□ 1.75
LINC01220-202ENST00000561000 NBPF4Q96M43 638 aa25.96■■□□□ 1.75
LINC01220-202ENST00000561000 CARD14Q9BXL6 1004 aa25.96■■□□□ 1.75
LINC01220-202ENST00000561000 ATF5Q9Y2D1 282 aaPredicted RBP25.96■■□□□ 1.75
LINC01220-202ENST00000561000 USHBP1Q8N6Y0 703 aa25.95■■□□□ 1.74
LINC01220-202ENST00000561000 SYTL4Q96C24 671 aaPredicted RBP25.95■■□□□ 1.74
LINC01220-202ENST00000561000 RTL1A6NKG5 1358 aa25.95■■□□□ 1.74
LINC01220-202ENST00000561000 PRIM1P49642 420 aaKnown RBP25.93■■□□□ 1.74
LINC01220-202ENST00000561000 HSP90AB2PQ58FF8 381 aa25.93■■□□□ 1.74
LINC01220-202ENST00000561000 POLR3GLQ9BT43 218 aa25.93■■□□□ 1.74
LINC01220-202ENST00000561000 NHSQ6T4R5 1651 aa25.92■■□□□ 1.74
LINC01220-202ENST00000561000 RAPGEF4Q8WZA2 1011 aa25.91■■□□□ 1.74
LINC01220-202ENST00000561000 LRRC4BQ9NT99 713 aa25.91■■□□□ 1.74
LINC01220-202ENST00000561000 SMG6Q86US8 1419 aaKnown RBP25.9■■□□□ 1.74
LINC01220-202ENST00000561000 NSD3Q9BZ95 1437 aa25.89■■□□□ 1.74
LINC01220-202ENST00000561000 DCAF8L1A6NGE4 600 aa25.88■■□□□ 1.73
LINC01220-202ENST00000561000 TATP17735 454 aaPredicted RBP25.88■■□□□ 1.73
LINC01220-202ENST00000561000 MEGF6O75095 1541 aa25.88■■□□□ 1.73
LINC01220-202ENST00000561000 INSRP06213 1382 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms