RNA–Protein interactions for RNA: ENST00000560986.1

HMG20A-212, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 747 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-212ENST00000560986 RETREG3Q86VR2 466 aa8.7□□□□□ -1.02
HMG20A-212ENST00000560986 ARHGAP35Q9NRY4 1499 aa8.7□□□□□ -1.02
HMG20A-212ENST00000560986 ADAMTS12P58397 1594 aa8.69□□□□□ -1.02
HMG20A-212ENST00000560986 CTTNBP2Q8WZ74 1663 aa8.69□□□□□ -1.02
HMG20A-212ENST00000560986 SNRPBP14678 240 aaKnown RBP8.69□□□□□ -1.02
HMG20A-212ENST00000560986 PRPF38BQ5VTL8 546 aaKnown RBP8.69□□□□□ -1.02
HMG20A-212ENST00000560986 TDRD9Q8NDG6 1382 aaKnown RBP8.69□□□□□ -1.02
HMG20A-212ENST00000560986 ARAP1Q96P48 1450 aa8.69□□□□□ -1.02
HMG20A-212ENST00000560986 PBRM1Q86U86 1689 aa8.69□□□□□ -1.02
HMG20A-212ENST00000560986 NUTM2BA6NNL0 878 aaPredicted RBP8.68□□□□□ -1.02
HMG20A-212ENST00000560986 NUTM2EB1AL46 878 aaPredicted RBP8.68□□□□□ -1.02
HMG20A-212ENST00000560986 RTL5Q5HYW3 569 aaPredicted RBP8.68□□□□□ -1.02
HMG20A-212ENST00000560986 NUTM2DQ5VT03 806 aaPredicted RBP8.68□□□□□ -1.02
HMG20A-212ENST00000560986 NUTM2AQ8IVF1 878 aaPredicted RBP8.68□□□□□ -1.02
HMG20A-212ENST00000560986 CABLES1Q8TDN4 633 aa8.68□□□□□ -1.02
HMG20A-212ENST00000560986 CLUAP1Q96AJ1 413 aa8.68□□□□□ -1.02
HMG20A-212ENST00000560986 NUDT12Q9BQG2 462 aa8.68□□□□□ -1.02
HMG20A-212ENST00000560986 ZBTB3Q9H5J0 574 aa8.68□□□□□ -1.02
HMG20A-212ENST00000560986 FMN1Q68DA7 1419 aa8.68□□□□□ -1.02
HMG20A-212ENST00000560986 A6NJR5 290 aa8.67□□□□□ -1.02
HMG20A-212ENST00000560986 SIAH2O43255 324 aa8.67□□□□□ -1.02
HMG20A-212ENST00000560986 HRCP23327 699 aa8.67□□□□□ -1.02
HMG20A-212ENST00000560986 NFX1Q12986 1120 aaKnown RBP8.67□□□□□ -1.02
HMG20A-212ENST00000560986 SNRKQ9NRH2 765 aa8.67□□□□□ -1.02
HMG20A-212ENST00000560986 C6orf229H3BNL8 230 aa8.66□□□□□ -1.02
HMG20A-212ENST00000560986 WFS1O76024 890 aa8.66□□□□□ -1.02
HMG20A-212ENST00000560986 EIF4G3O43432 1585 aaKnown RBP8.65□□□□□ -1.02
HMG20A-212ENST00000560986 SAMD9Q5K651 1589 aa8.65□□□□□ -1.02
HMG20A-212ENST00000560986 FYCO1Q9BQS8 1478 aa8.65□□□□□ -1.02
HMG20A-212ENST00000560986 AP1G2O75843 785 aa8.65□□□□□ -1.02
HMG20A-212ENST00000560986 ALDH1A1P00352 501 aa8.65□□□□□ -1.02
HMG20A-212ENST00000560986 TRIM47Q96LD4 638 aa8.65□□□□□ -1.02
HMG20A-212ENST00000560986 KIAA0586Q9BVV6 1533 aa8.64□□□□□ -1.03
HMG20A-212ENST00000560986 SYNJ2O15056 1496 aa8.64□□□□□ -1.03
HMG20A-212ENST00000560986 SH3BP2P78314 561 aa8.64□□□□□ -1.03
HMG20A-212ENST00000560986 MTMR2Q13614 643 aa8.64□□□□□ -1.03
HMG20A-212ENST00000560986 LCE2CQ5TA81 110 aa8.64□□□□□ -1.03
HMG20A-212ENST00000560986 PCGF6Q9BYE7 350 aa8.64□□□□□ -1.03
HMG20A-212ENST00000560986 RAD21O60216 631 aa8.63□□□□□ -1.03
HMG20A-212ENST00000560986 POM121Q96HA1 1249 aa8.63□□□□□ -1.03
HMG20A-212ENST00000560986 IQGAP2Q13576 1575 aa8.63□□□□□ -1.03
HMG20A-212ENST00000560986 UGGT2Q9NYU1 1516 aa8.63□□□□□ -1.03
HMG20A-212ENST00000560986 CASKIN1Q8WXD9 1431 aa8.63□□□□□ -1.03
HMG20A-212ENST00000560986 CCNYL3P0C7X3 344 aa8.62□□□□□ -1.03
HMG20A-212ENST00000560986 MTMR14Q8NCE2 650 aa8.62□□□□□ -1.03
HMG20A-212ENST00000560986 EHBP1Q8NDI1 1231 aa8.62□□□□□ -1.03
HMG20A-212ENST00000560986 SENP2Q9HC62 589 aa8.62□□□□□ -1.03
HMG20A-212ENST00000560986 GRIN2AQ12879 1464 aa8.62□□□□□ -1.03
HMG20A-212ENST00000560986 TRAK2O60296 914 aa8.61□□□□□ -1.03
HMG20A-212ENST00000560986 USP17L8P0C7I0 530 aa8.61□□□□□ -1.03
HMG20A-212ENST00000560986 ZEB1P37275 1124 aaPredicted RBP8.61□□□□□ -1.03
HMG20A-212ENST00000560986 PTPRNQ16849 979 aa8.61□□□□□ -1.03
HMG20A-212ENST00000560986 PROSER2Q86WR7 435 aaPredicted RBP8.61□□□□□ -1.03
HMG20A-212ENST00000560986 PRR7Q8TB68 274 aa8.61□□□□□ -1.03
HMG20A-212ENST00000560986 EVA1BQ9NVM1 165 aa8.61□□□□□ -1.03
HMG20A-212ENST00000560986 COG6Q9Y2V7 657 aa8.61□□□□□ -1.03
HMG20A-212ENST00000560986 ZNF608Q9ULD9 1512 aaPredicted RBP8.6□□□□□ -1.03
HMG20A-212ENST00000560986 SNAPC4Q5SXM2 1469 aa8.6□□□□□ -1.03
HMG20A-212ENST00000560986 SOCS7O14512 581 aa8.6□□□□□ -1.03
HMG20A-212ENST00000560986 UNC93B1Q9H1C4 597 aa8.6□□□□□ -1.03
HMG20A-212ENST00000560986 NUP160Q12769 1436 aa8.6□□□□□ -1.03
HMG20A-212ENST00000560986 TERTO14746 1132 aaKnown RBP8.59□□□□□ -1.03
HMG20A-212ENST00000560986 BAP1Q92560 729 aa8.59□□□□□ -1.03
HMG20A-212ENST00000560986 ARXQ96QS3 562 aa8.59□□□□□ -1.03
HMG20A-212ENST00000560986 TIAM1Q13009 1591 aa8.59□□□□□ -1.03
HMG20A-212ENST00000560986 CCDC18Q5T9S5 1454 aa8.58□□□□□ -1.04
HMG20A-212ENST00000560986 ARID3CA6NKF2 412 aa8.58□□□□□ -1.04
HMG20A-212ENST00000560986 CFAP99D6REC4 459 aa8.58□□□□□ -1.04
HMG20A-212ENST00000560986 APBB1O00213 710 aa8.58□□□□□ -1.04
HMG20A-212ENST00000560986 WIPF1O43516 503 aa8.58□□□□□ -1.04
HMG20A-212ENST00000560986 KCNH2Q12809 1159 aa8.58□□□□□ -1.04
HMG20A-212ENST00000560986 FNBP4Q8N3X1 1017 aaPredicted RBP8.58□□□□□ -1.04
HMG20A-212ENST00000560986 HELBQ8NG08 1087 aaPredicted RBP8.58□□□□□ -1.04
HMG20A-212ENST00000560986 KIFC2Q96AC6 838 aa8.58□□□□□ -1.04
HMG20A-212ENST00000560986 C1orf115Q9H7X2 142 aa8.58□□□□□ -1.04
HMG20A-212ENST00000560986 CFAP43Q8NDM7 1665 aa8.57□□□□□ -1.04
HMG20A-212ENST00000560986 CTDSPL2Q05D32 466 aa8.57□□□□□ -1.04
HMG20A-212ENST00000560986 LINC01559Q495D7 138 aa8.57□□□□□ -1.04
HMG20A-212ENST00000560986 DESI1Q6ICB0 168 aa8.57□□□□□ -1.04
HMG20A-212ENST00000560986 TRIM46Q7Z4K8 759 aa8.57□□□□□ -1.04
HMG20A-212ENST00000560986 TSC1Q92574 1164 aa8.57□□□□□ -1.04
HMG20A-212ENST00000560986 WASF2Q9Y6W5 498 aa8.57□□□□□ -1.04
HMG20A-212ENST00000560986 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.57□□□□□ -1.04
HMG20A-212ENST00000560986 RRBP1Q9P2E9 1410 aaKnown RBP8.56□□□□□ -1.04
HMG20A-212ENST00000560986 BMP1P13497 986 aa8.56□□□□□ -1.04
HMG20A-212ENST00000560986 GDPD2Q9HCC8 539 aa8.56□□□□□ -1.04
HMG20A-212ENST00000560986 PRM3Q9NNZ6 103 aa8.56□□□□□ -1.04
HMG20A-212ENST00000560986 CAPN5O15484 640 aaPredicted RBP8.55□□□□□ -1.04
HMG20A-212ENST00000560986 TLL2Q9Y6L7 1015 aa8.55□□□□□ -1.04
HMG20A-212ENST00000560986 LRRC9Q6ZRR7 1453 aa8.55□□□□□ -1.04
HMG20A-212ENST00000560986 CARMIL2Q6F5E8 1435 aa8.54□□□□□ -1.04
HMG20A-212ENST00000560986 PCF11O94913 1555 aaKnown RBP8.54□□□□□ -1.04
HMG20A-212ENST00000560986 ZNF511Q8NB15 262 aa8.54□□□□□ -1.04
HMG20A-212ENST00000560986 GJD4Q96KN9 370 aaPredicted RBP8.54□□□□□ -1.04
HMG20A-212ENST00000560986 TBC1D2BQ9UPU7 963 aa8.54□□□□□ -1.04
HMG20A-212ENST00000560986 LYPD8Q6UX82 237 aa8.53□□□□□ -1.04
HMG20A-212ENST00000560986 LRRN4Q8WUT4 740 aa8.53□□□□□ -1.04
HMG20A-212ENST00000560986 CHMP7Q8WUX9 453 aaPredicted RBP8.53□□□□□ -1.04
HMG20A-212ENST00000560986 HMX1Q9NP08 348 aaPredicted RBP8.53□□□□□ -1.04
HMG20A-212ENST00000560986 HECW1Q76N89 1606 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms