RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 EVA1CP58658 441 aa21.47■■□□□ 1.03
RABGGTA-219ENST00000560871 MYT1Q01538 1121 aa21.47■■□□□ 1.03
RABGGTA-219ENST00000560871 KCNH5Q8NCM2 988 aa21.47■■□□□ 1.03
RABGGTA-219ENST00000560871 ABCC6O95255 1503 aa21.46■■□□□ 1.03
RABGGTA-219ENST00000560871 EP400Q96L91 3159 aa21.46■■□□□ 1.03
RABGGTA-219ENST00000560871 CCDC7Q96M83 1385 aa21.46■■□□□ 1.03
RABGGTA-219ENST00000560871 AATKQ6ZMQ8 1374 aa21.45■■□□□ 1.02
RABGGTA-219ENST00000560871 FYB1O15117 783 aa21.44■■□□□ 1.02
RABGGTA-219ENST00000560871 LARP1Q6PKG0 1096 aaKnown RBP21.44■■□□□ 1.02
RABGGTA-219ENST00000560871 ARHGEF25Q86VW2 580 aa21.44■■□□□ 1.02
RABGGTA-219ENST00000560871 WASHC2AQ641Q2 1341 aa21.44■■□□□ 1.02
RABGGTA-219ENST00000560871 COL5A2P05997 1499 aaPredicted RBP21.44■■□□□ 1.02
RABGGTA-219ENST00000560871 RGPD5Q99666 1765 aa21.43■■□□□ 1.02
RABGGTA-219ENST00000560871 LTN1O94822 1766 aa21.42■■□□□ 1.02
RABGGTA-219ENST00000560871 BARGINQ6ZT62 677 aa21.42■■□□□ 1.02
RABGGTA-219ENST00000560871 SOX12O15370 315 aa21.41■■□□□ 1.02
RABGGTA-219ENST00000560871 COG3Q96JB2 828 aa21.41■■□□□ 1.02
RABGGTA-219ENST00000560871 GGNBP2Q9H3C7 697 aa21.41■■□□□ 1.02
RABGGTA-219ENST00000560871 PANK3Q9H999 370 aa21.41■■□□□ 1.02
RABGGTA-219ENST00000560871 ANKRD26Q9UPS8 1709 aa21.41■■□□□ 1.02
RABGGTA-219ENST00000560871 ZBTB7CA1YPR0 619 aa21.4■■□□□ 1.02
RABGGTA-219ENST00000560871 USP35Q9P2H5 1018 aa21.4■■□□□ 1.02
RABGGTA-219ENST00000560871 RGPD1P0DJD0 1748 aa21.39■■□□□ 1.01
RABGGTA-219ENST00000560871 ZEB1P37275 1124 aaPredicted RBP21.39■■□□□ 1.01
RABGGTA-219ENST00000560871 TCP11L2Q8N4U5 519 aa21.39■■□□□ 1.01
RABGGTA-219ENST00000560871 THRAP3Q9Y2W1 955 aaKnown RBP21.39■■□□□ 1.01
RABGGTA-219ENST00000560871 CRB1P82279 1406 aa21.38■■□□□ 1.01
RABGGTA-219ENST00000560871 SF3B2Q13435 895 aaKnown RBP21.38■■□□□ 1.01
RABGGTA-219ENST00000560871 AXIN2Q9Y2T1 843 aa21.38■■□□□ 1.01
RABGGTA-219ENST00000560871 PARP4Q9UKK3 1724 aaKnown RBP21.38■■□□□ 1.01
RABGGTA-219ENST00000560871 CGNL1Q0VF96 1302 aa21.37■■□□□ 1.01
RABGGTA-219ENST00000560871 FAM182BQ5T319 152 aa21.37■■□□□ 1.01
RABGGTA-219ENST00000560871 DEFB132Q7Z7B7 95 aa21.36■■□□□ 1.01
RABGGTA-219ENST00000560871 WNK3Q9BYP7 1800 aa21.35■■□□□ 1.01
RABGGTA-219ENST00000560871 TNS1Q9HBL0 1735 aaKnown RBP21.35■■□□□ 1.01
RABGGTA-219ENST00000560871 NSD2O96028 1365 aa21.34■■□□□ 1.01
RABGGTA-219ENST00000560871 WDR17Q8IZU2 1322 aa21.33■■□□□ 1.01
RABGGTA-219ENST00000560871 MAP3K19Q56UN5 1328 aa21.32■■□□□ 1
RABGGTA-219ENST00000560871 FBLN1P23142 703 aa21.32■■□□□ 1
RABGGTA-219ENST00000560871 RTL1A6NKG5 1358 aa21.32■■□□□ 1
RABGGTA-219ENST00000560871 PEAK1Q9H792 1746 aa21.32■■□□□ 1
RABGGTA-219ENST00000560871 PDE3BQ13370 1112 aa21.31■■□□□ 1
RABGGTA-219ENST00000560871 FAM196AQ6ZSG2 479 aa21.31■■□□□ 1
RABGGTA-219ENST00000560871 TOM1L2Q6ZVM7 507 aa21.31■■□□□ 1
RABGGTA-219ENST00000560871 PER1O15534 1290 aaPredicted RBP21.3■■□□□ 1
RABGGTA-219ENST00000560871 BAG6P46379 1132 aa21.3■■□□□ 1
RABGGTA-219ENST00000560871 ERBB3P21860 1342 aa21.29■■□□□ 1
RABGGTA-219ENST00000560871 AMER1Q5JTC6 1135 aaPredicted RBP21.29■■□□□ 1
RABGGTA-219ENST00000560871 LRRC37A3O60309 1634 aa21.29■■□□□ 1
RABGGTA-219ENST00000560871 RRS1Q15050 365 aaKnown RBP21.28■■□□□ 1
RABGGTA-219ENST00000560871 IP6K1Q92551 441 aa21.28■■□□□ 1
RABGGTA-219ENST00000560871 KIF24Q5T7B8 1368 aa21.27■■□□□ 1
RABGGTA-219ENST00000560871 HOXC9P31274 260 aa21.27■■□□□ 1
RABGGTA-219ENST00000560871 KNSTRNQ9Y448 316 aa21.27■■□□□ 1
RABGGTA-219ENST00000560871 DISP2A7MBM2 1401 aa21.27■■□□□ 1
RABGGTA-219ENST00000560871 FAM208AQ9UK61 1670 aaKnown RBP21.27■■□□□ 1
RABGGTA-219ENST00000560871 CARD10Q9BWT7 1032 aa21.26■□□□□ 0.99
RABGGTA-219ENST00000560871 TRIM37O94972 964 aa21.25■□□□□ 0.99
RABGGTA-219ENST00000560871 SMG6Q86US8 1419 aaKnown RBP21.25■□□□□ 0.99
RABGGTA-219ENST00000560871 SBF2Q86WG5 1849 aa21.25■□□□□ 0.99
RABGGTA-219ENST00000560871 FLT4P35916 1363 aa21.24■□□□□ 0.99
RABGGTA-219ENST00000560871 CSB-PGBD3P0DP91 1061 aa21.24■□□□□ 0.99
RABGGTA-219ENST00000560871 EN1Q05925 392 aaPredicted RBP21.24■□□□□ 0.99
RABGGTA-219ENST00000560871 NPC1L1Q9UHC9 1359 aa21.23■□□□□ 0.99
RABGGTA-219ENST00000560871 ANKRD24Q8TF21 1146 aa21.23■□□□□ 0.99
RABGGTA-219ENST00000560871 CDCA7Q9BWT1 371 aaPredicted RBP21.23■□□□□ 0.99
RABGGTA-219ENST00000560871 AMPHP49418 695 aa21.22■□□□□ 0.99
RABGGTA-219ENST00000560871 DDB1Q16531 1140 aa21.22■□□□□ 0.99
RABGGTA-219ENST00000560871 EMILIN1Q9Y6C2 1016 aa21.22■□□□□ 0.99
RABGGTA-219ENST00000560871 INSRP06213 1382 aa21.21■□□□□ 0.99
RABGGTA-219ENST00000560871 OVOS2A0A0G2JMS6 1433 aa21.2■□□□□ 0.98
RABGGTA-219ENST00000560871 CAMKK2Q96RR4 588 aa21.19■□□□□ 0.98
RABGGTA-219ENST00000560871 POLKQ9UBT6 870 aa21.19■□□□□ 0.98
RABGGTA-219ENST00000560871 MAP2P11137 1827 aaKnown RBP21.19■□□□□ 0.98
RABGGTA-219ENST00000560871 APBA3O96018 575 aa21.18■□□□□ 0.98
RABGGTA-219ENST00000560871 EZH2Q15910 746 aaKnown RBP21.18■□□□□ 0.98
RABGGTA-219ENST00000560871 MORC1Q86VD1 984 aa21.18■□□□□ 0.98
RABGGTA-219ENST00000560871 RREB1Q92766 1687 aa21.18■□□□□ 0.98
RABGGTA-219ENST00000560871 HSP90AB2PQ58FF8 381 aa21.17■□□□□ 0.98
RABGGTA-219ENST00000560871 RGPD2P0DJD1 1756 aa21.16■□□□□ 0.98
RABGGTA-219ENST00000560871 TNNT2P45379 298 aaPredicted RBP21.16■□□□□ 0.98
RABGGTA-219ENST00000560871 MARCH10Q8NA82 808 aaPredicted RBP21.16■□□□□ 0.98
RABGGTA-219ENST00000560871 NLRP2Q9NX02 1062 aa21.16■□□□□ 0.98
RABGGTA-219ENST00000560871 PARD3Q8TEW0 1356 aa21.15■□□□□ 0.98
RABGGTA-219ENST00000560871 EXOC5O00471 708 aa21.15■□□□□ 0.98
RABGGTA-219ENST00000560871 LTV1Q96GA3 475 aaPredicted RBP21.15■□□□□ 0.98
RABGGTA-219ENST00000560871 BCL9O00512 1426 aa21.14■□□□□ 0.98
RABGGTA-219ENST00000560871 CC2D1BQ5T0F9 858 aaKnown RBP21.14■□□□□ 0.97
RABGGTA-219ENST00000560871 NCAPD2Q15021 1401 aa21.13■□□□□ 0.97
RABGGTA-219ENST00000560871 NUP188Q5SRE5 1749 aa21.13■□□□□ 0.97
RABGGTA-219ENST00000560871 RGPD3A6NKT7 1758 aaPredicted RBP21.13■□□□□ 0.97
RABGGTA-219ENST00000560871 RGPD4Q7Z3J3 1758 aa21.13■□□□□ 0.97
RABGGTA-219ENST00000560871 TNS2Q63HR2 1409 aa21.12■□□□□ 0.97
RABGGTA-219ENST00000560871 PPM1GO15355 546 aaPredicted RBP21.11■□□□□ 0.97
RABGGTA-219ENST00000560871 IL2RBP14784 551 aa21.11■□□□□ 0.97
RABGGTA-219ENST00000560871 PSDA5PKW4 1024 aaPredicted RBP21.1■□□□□ 0.97
RABGGTA-219ENST00000560871 NBPF6Q5VWK0 638 aa21.1■□□□□ 0.97
RABGGTA-219ENST00000560871 NBPF4Q96M43 638 aa21.1■□□□□ 0.97
RABGGTA-219ENST00000560871 MEGF6O75095 1541 aa21.09■□□□□ 0.97
RABGGTA-219ENST00000560871 BCL11BQ9C0K0 894 aaPredicted RBP21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms