RNA–Protein interactions for RNA: ENST00000560532.1

SLTM-223, Transcript of SAFB like transcription modulator, human

TSL 4

Gene SLTM, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLTM-223	ENST00000560532	NUTM2A	Q8IVF1	878 aa	Predicted RBP	10.17	□□□□□ -0.78
SLTM-223	ENST00000560532	TRMT44	Q8IYL2	757 aa	Known RBP	10.16	□□□□□ -0.78
SLTM-223	ENST00000560532	VSIG10	Q8N0Z9	540 aa		10.16	□□□□□ -0.78
SLTM-223	ENST00000560532	CCDC155	Q8N6L0	562 aa		10.16	□□□□□ -0.78
SLTM-223	ENST00000560532	ZC3H15	Q8WU90	426 aa	Known RBP	10.15	□□□□□ -0.78
SLTM-223	ENST00000560532	LIMD1	Q9UGP4	676 aa		10.15	□□□□□ -0.78
SLTM-223	ENST00000560532	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	10.14	□□□□□ -0.79
SLTM-223	ENST00000560532	WHAMM	Q8TF30	809 aa		10.14	□□□□□ -0.79
SLTM-223	ENST00000560532	CDC14C	A4D256	554 aa		10.13	□□□□□ -0.79
SLTM-223	ENST00000560532	IRS1	P35568	1242 aa		10.13	□□□□□ -0.79
SLTM-223	ENST00000560532	GPAT2	Q6NUI2	795 aa		10.13	□□□□□ -0.79
SLTM-223	ENST00000560532	NANOS1	Q8WY41	292 aa	Known RBP	10.13	□□□□□ -0.79
SLTM-223	ENST00000560532	VWA5B2	Q8N398	1253 aa		10.12	□□□□□ -0.79
SLTM-223	ENST00000560532	PGPEP1	Q9NXJ5	209 aa		10.12	□□□□□ -0.79
SLTM-223	ENST00000560532	SPINT1	O43278	529 aa		10.11	□□□□□ -0.79
SLTM-223	ENST00000560532	ERFE	Q4G0M1	354 aa		10.11	□□□□□ -0.79
SLTM-223	ENST00000560532	MYSM1	Q5VVJ2	828 aa		10.11	□□□□□ -0.79
SLTM-223	ENST00000560532	HELB	Q8NG08	1087 aa	Predicted RBP	10.11	□□□□□ -0.79
SLTM-223	ENST00000560532	SLC35F4	A4IF30	521 aa		10.1	□□□□□ -0.79
SLTM-223	ENST00000560532	TRIM66	O15016	1216 aa		10.1	□□□□□ -0.79
SLTM-223	ENST00000560532	ITGA6	P23229	1130 aa		10.1	□□□□□ -0.79
SLTM-223	ENST00000560532		Q6ZVU0	165 aa		10.1	□□□□□ -0.79
SLTM-223	ENST00000560532	LILRB3	O75022	631 aa		10.09	□□□□□ -0.79
SLTM-223	ENST00000560532	RTL5	Q5HYW3	569 aa	Predicted RBP	10.09	□□□□□ -0.79
SLTM-223	ENST00000560532	AGBL1	Q96MI9	1066 aa		10.09	□□□□□ -0.79
SLTM-223	ENST00000560532	ARHGEF15	O94989	841 aa		10.08	□□□□□ -0.8
SLTM-223	ENST00000560532	CTSO	P43234	321 aa	Predicted RBP	10.08	□□□□□ -0.8
SLTM-223	ENST00000560532	MARS	P56192	900 aa	Known RBP	10.08	□□□□□ -0.8
SLTM-223	ENST00000560532	SV2A	Q7L0J3	742 aa		10.08	□□□□□ -0.8
SLTM-223	ENST00000560532	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	10.08	□□□□□ -0.8
SLTM-223	ENST00000560532	SLURP2	P0DP57	97 aa		10.07	□□□□□ -0.8
SLTM-223	ENST00000560532	RELB	Q01201	579 aa		10.07	□□□□□ -0.8
SLTM-223	ENST00000560532	KCTD15	Q96SI1	283 aa	Predicted RBP	10.06	□□□□□ -0.8
SLTM-223	ENST00000560532	INSM2	Q96T92	566 aa	Predicted RBP	10.06	□□□□□ -0.8
SLTM-223	ENST00000560532	POLM	Q9NP87	494 aa	Predicted RBP	10.06	□□□□□ -0.8
SLTM-223	ENST00000560532	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	10.05	□□□□□ -0.8
SLTM-223	ENST00000560532	SLC10A4	Q96EP9	437 aa		10.05	□□□□□ -0.8
SLTM-223	ENST00000560532	ARHGAP9	Q9BRR9	750 aa		10.05	□□□□□ -0.8
SLTM-223	ENST00000560532	TUSC1	Q2TAM9	212 aa		10.04	□□□□□ -0.8
SLTM-223	ENST00000560532	ADAMTS2	O95450	1211 aa		10.02	□□□□□ -0.81
SLTM-223	ENST00000560532	DHX9	Q08211	1270 aa	Known RBP	10.02	□□□□□ -0.81
SLTM-223	ENST00000560532	KANK3	Q6NY19	840 aa		10.02	□□□□□ -0.81
SLTM-223	ENST00000560532	AK7	Q96M32	723 aa		10.02	□□□□□ -0.81
SLTM-223	ENST00000560532	ZNF395	Q9H8N7	513 aa	Predicted RBP	10.02	□□□□□ -0.81
SLTM-223	ENST00000560532	IGHA1	P01876	353 aa		10.01	□□□□□ -0.81
SLTM-223	ENST00000560532	CLK2	P49760	499 aa	Known RBP	10.01	□□□□□ -0.81
SLTM-223	ENST00000560532	INTS6L	Q5JSJ4	861 aa	Known RBP	10.01	□□□□□ -0.81
SLTM-223	ENST00000560532	LYPD4	Q6UWN0	246 aa		10.01	□□□□□ -0.81
SLTM-223	ENST00000560532	RNF217	Q8TC41	542 aa		10.01	□□□□□ -0.81
SLTM-223	ENST00000560532	SCARF2	Q96GP6	870 aa	Predicted RBP	10.01	□□□□□ -0.81
SLTM-223	ENST00000560532	CTDSPL2	Q05D32	466 aa		10	□□□□□ -0.81
SLTM-223	ENST00000560532	ZBTB33	Q86T24	672 aa		10	□□□□□ -0.81
SLTM-223	ENST00000560532	SENP3-EIF4A1	A0A087X0R7	540 aa		9.99	□□□□□ -0.81
SLTM-223	ENST00000560532	MAP3K10	Q02779	954 aa		9.99	□□□□□ -0.81
SLTM-223	ENST00000560532	PDXDC2P	Q6P474	469 aa		9.99	□□□□□ -0.81
SLTM-223	ENST00000560532	CDV3	Q9UKY7	258 aa	Known RBP	9.99	□□□□□ -0.81
SLTM-223	ENST00000560532	RAB15	P59190	212 aa		9.98	□□□□□ -0.81
SLTM-223	ENST00000560532	POLR3E	Q9NVU0	708 aa		9.98	□□□□□ -0.81
SLTM-223	ENST00000560532	FKBPL	Q9UIM3	349 aa		9.98	□□□□□ -0.81
SLTM-223	ENST00000560532	FOXK2	Q01167	660 aa		9.97	□□□□□ -0.81
SLTM-223	ENST00000560532	PDE4D	Q08499	809 aa		9.97	□□□□□ -0.81
SLTM-223	ENST00000560532	LRRN4	Q8WUT4	740 aa		9.97	□□□□□ -0.81
SLTM-223	ENST00000560532	TMPRSS4	Q9NRS4	437 aa		9.97	□□□□□ -0.81
SLTM-223	ENST00000560532	CUEDC1	Q9NWM3	386 aa	Predicted RBP	9.96	□□□□□ -0.82
SLTM-223	ENST00000560532	CELA2B	P08218	269 aa	Predicted RBP	9.95	□□□□□ -0.82
SLTM-223	ENST00000560532	SRSF11	Q05519	484 aa	Known RBP	9.95	□□□□□ -0.82
SLTM-223	ENST00000560532	GAS6	Q14393	721 aa		9.95	□□□□□ -0.82
SLTM-223	ENST00000560532	FOXD4L5	Q5VV16	416 aa	Predicted RBP	9.95	□□□□□ -0.82
SLTM-223	ENST00000560532	NR6A1	Q15406	480 aa		9.94	□□□□□ -0.82
SLTM-223	ENST00000560532	ZNF784	Q8NCA9	323 aa	Predicted RBP	9.94	□□□□□ -0.82
SLTM-223	ENST00000560532	ADH1A	P07327	375 aa		9.93	□□□□□ -0.82
SLTM-223	ENST00000560532	OCSTAMP	Q9BR26	566 aa		9.93	□□□□□ -0.82
SLTM-223	ENST00000560532	ADAM32	Q8TC27	787 aa		9.92	□□□□□ -0.82
SLTM-223	ENST00000560532	PTK2	Q05397	1052 aa		9.91	□□□□□ -0.82
SLTM-223	ENST00000560532	RHOQ	P17081	205 aa		9.9	□□□□□ -0.82
SLTM-223	ENST00000560532	ADD1	P35611	737 aa	Known RBP	9.9	□□□□□ -0.82
SLTM-223	ENST00000560532	NBPF20	Q3BBV1	942 aa		9.9	□□□□□ -0.82
SLTM-223	ENST00000560532	PLA2G4E	Q3MJ16	856 aa		9.9	□□□□□ -0.82
SLTM-223	ENST00000560532	LYSMD3	Q7Z3D4	306 aa		9.9	□□□□□ -0.82
SLTM-223	ENST00000560532	ENAM	Q9NRM1	1142 aa		9.9	□□□□□ -0.82
SLTM-223	ENST00000560532	CNTNAP5	Q8WYK1	1306 aa		9.89	□□□□□ -0.83
SLTM-223	ENST00000560532	ZC3H4	Q9UPT8	1303 aa	Known RBP	9.89	□□□□□ -0.83
SLTM-223	ENST00000560532	GPR25	O00155	361 aa		9.89	□□□□□ -0.83
SLTM-223	ENST00000560532	PTGIR	P43119	386 aa		9.89	□□□□□ -0.83
SLTM-223	ENST00000560532	PRICKLE2	Q7Z3G6	844 aa		9.89	□□□□□ -0.83
SLTM-223	ENST00000560532	RSPH6A	Q9H0K4	717 aa		9.89	□□□□□ -0.83
SLTM-223	ENST00000560532	ERVH48-1	M5A8F1	160 aa		9.88	□□□□□ -0.83
SLTM-223	ENST00000560532	MSTN	O14793	375 aa		9.88	□□□□□ -0.83
SLTM-223	ENST00000560532	LILRA1	O75019	489 aa		9.88	□□□□□ -0.83
SLTM-223	ENST00000560532	XP32	Q5T750	250 aa		9.88	□□□□□ -0.83
SLTM-223	ENST00000560532	KDF1	Q8NAX2	398 aa	Predicted RBP	9.88	□□□□□ -0.83
SLTM-223	ENST00000560532	FBXO31	Q5XUX0	539 aa	Predicted RBP	9.87	□□□□□ -0.83
SLTM-223	ENST00000560532	ZNF837	Q96EG3	531 aa	Predicted RBP	9.87	□□□□□ -0.83
SLTM-223	ENST00000560532	DCAF5	Q96JK2	942 aa		9.87	□□□□□ -0.83
SLTM-223	ENST00000560532	MBIP	Q9NS73	344 aa		9.87	□□□□□ -0.83
SLTM-223	ENST00000560532	PHF20L1	A8MW92	1017 aa		9.86	□□□□□ -0.83
SLTM-223	ENST00000560532	SPOCK3	Q9BQ16	436 aa		9.86	□□□□□ -0.83
SLTM-223	ENST00000560532	IGF1R	P08069	1367 aa		9.86	□□□□□ -0.83
SLTM-223	ENST00000560532	ADAM23	O75077	832 aa		9.85	□□□□□ -0.83
SLTM-223	ENST00000560532	DZIP3	Q86Y13	1208 aa	Known RBP	9.85	□□□□□ -0.83

Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms