RNA–Protein interactions for RNA: ENST00000560420.1

PSME1-207, Transcript of proteasome activator subunit 1, humanhuman

TSL 2

Gene PSME1, Length 922 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME1-207ENST00000560420 PARP4Q9UKK3 1724 aaKnown RBP20.55■□□□□ 0.88
PSME1-207ENST00000560420 LTN1O94822 1766 aa20.54■□□□□ 0.88
PSME1-207ENST00000560420 WNK3Q9BYP7 1800 aa20.54■□□□□ 0.88
PSME1-207ENST00000560420 THRAP3Q9Y2W1 955 aaKnown RBP20.53■□□□□ 0.88
PSME1-207ENST00000560420 BLMP54132 1417 aaPredicted RBP20.53■□□□□ 0.88
PSME1-207ENST00000560420 HSPA5P11021 654 aaKnown RBP20.52■□□□□ 0.88
PSME1-207ENST00000560420 EIF4G2P78344 907 aaKnown RBP eCLIP20.52■□□□□ 0.881e-6■□□□□ 10.3
PSME1-207ENST00000560420 TCP11L2Q8N4U5 519 aa20.52■□□□□ 0.88
PSME1-207ENST00000560420 WDR17Q8IZU2 1322 aa20.52■□□□□ 0.87
PSME1-207ENST00000560420 EVA1CP58658 441 aa20.51■□□□□ 0.87
PSME1-207ENST00000560420 CCDC125Q86Z20 511 aa20.5■□□□□ 0.87
PSME1-207ENST00000560420 CARD14Q9BXL6 1004 aa20.5■□□□□ 0.87
PSME1-207ENST00000560420 DISP2A7MBM2 1401 aa20.5■□□□□ 0.87
PSME1-207ENST00000560420 LRRC37A3O60309 1634 aa20.49■□□□□ 0.87
PSME1-207ENST00000560420 KIF20BQ96Q89 1820 aa20.49■□□□□ 0.87
PSME1-207ENST00000560420 FYB1O15117 783 aa20.49■□□□□ 0.87
PSME1-207ENST00000560420 SOX12O15370 315 aa20.49■□□□□ 0.87
PSME1-207ENST00000560420 USP35Q9P2H5 1018 aa20.47■□□□□ 0.87
PSME1-207ENST00000560420 ERBB3P21860 1342 aa20.47■□□□□ 0.87
PSME1-207ENST00000560420 PEAK1Q9H792 1746 aa20.47■□□□□ 0.87
PSME1-207ENST00000560420 TNS1Q9HBL0 1735 aaKnown RBP20.47■□□□□ 0.87
PSME1-207ENST00000560420 NSD3Q9BZ95 1437 aa20.46■□□□□ 0.87
PSME1-207ENST00000560420 ZBTB7CA1YPR0 619 aa20.46■□□□□ 0.87
PSME1-207ENST00000560420 CARD10Q9BWT7 1032 aa20.45■□□□□ 0.86
PSME1-207ENST00000560420 A0A0G2JS52 829 aa20.44■□□□□ 0.86
PSME1-207ENST00000560420 MYT1Q01538 1121 aa20.44■□□□□ 0.86
PSME1-207ENST00000560420 COG3Q96JB2 828 aa20.44■□□□□ 0.86
PSME1-207ENST00000560420 RGPD1P0DJD0 1748 aa20.44■□□□□ 0.86
PSME1-207ENST00000560420 C11orf95C9JLR9 678 aaPredicted RBP20.43■□□□□ 0.86
PSME1-207ENST00000560420 MAP3K19Q56UN5 1328 aa20.43■□□□□ 0.86
PSME1-207ENST00000560420 FAM182BQ5T319 152 aa20.42■□□□□ 0.86
PSME1-207ENST00000560420 TOM1L2Q6ZVM7 507 aa20.42■□□□□ 0.86
PSME1-207ENST00000560420 IP6K1Q92551 441 aa20.42■□□□□ 0.86
PSME1-207ENST00000560420 GGNBP2Q9H3C7 697 aa20.42■□□□□ 0.86
PSME1-207ENST00000560420 CCDC7Q96M83 1385 aa20.42■□□□□ 0.86
PSME1-207ENST00000560420 FAM208AQ9UK61 1670 aaKnown RBP20.42■□□□□ 0.86
PSME1-207ENST00000560420 RTL1A6NKG5 1358 aa20.41■□□□□ 0.86
PSME1-207ENST00000560420 FBLN1P23142 703 aa20.4■□□□□ 0.86
PSME1-207ENST00000560420 ANKRD26Q9UPS8 1709 aa20.4■□□□□ 0.86
PSME1-207ENST00000560420 BCL9O00512 1426 aa20.39■□□□□ 0.85
PSME1-207ENST00000560420 HOXC9P31274 260 aa20.38■□□□□ 0.85
PSME1-207ENST00000560420 FAM196AQ6ZSG2 479 aa20.38■□□□□ 0.85
PSME1-207ENST00000560420 ANKRD24Q8TF21 1146 aa20.38■□□□□ 0.85
PSME1-207ENST00000560420 CDCA7Q9BWT1 371 aaPredicted RBP20.38■□□□□ 0.85
PSME1-207ENST00000560420 TNS2Q63HR2 1409 aa20.37■□□□□ 0.85
PSME1-207ENST00000560420 DEFB132Q7Z7B7 95 aa20.37■□□□□ 0.85
PSME1-207ENST00000560420 KIF24Q5T7B8 1368 aa20.36■□□□□ 0.85
PSME1-207ENST00000560420 CSB-PGBD3P0DP91 1061 aa20.36■□□□□ 0.85
PSME1-207ENST00000560420 OVOS2A0A0G2JMS6 1433 aa20.36■□□□□ 0.85
PSME1-207ENST00000560420 PDE3BQ13370 1112 aa20.35■□□□□ 0.85
PSME1-207ENST00000560420 SBF2Q86WG5 1849 aa20.34■□□□□ 0.85
PSME1-207ENST00000560420 RRS1Q15050 365 aaKnown RBP20.34■□□□□ 0.85
PSME1-207ENST00000560420 CGNL1Q0VF96 1302 aa20.33■□□□□ 0.85
PSME1-207ENST00000560420 DDB1Q16531 1140 aa20.33■□□□□ 0.85
PSME1-207ENST00000560420 KIF7Q2M1P5 1343 aa20.32■□□□□ 0.84
PSME1-207ENST00000560420 RGPD2P0DJD1 1756 aa20.32■□□□□ 0.84
PSME1-207ENST00000560420 MARCH10Q8NA82 808 aaPredicted RBP20.32■□□□□ 0.84
PSME1-207ENST00000560420 INSRP06213 1382 aa20.32■□□□□ 0.84
PSME1-207ENST00000560420 PANK3Q9H999 370 aa20.31■□□□□ 0.84
PSME1-207ENST00000560420 SRCAPQ6ZRS2 3230 aa20.31■□□□□ 0.84
PSME1-207ENST00000560420 FLT4P35916 1363 aa20.31■□□□□ 0.84
PSME1-207ENST00000560420 RREB1Q92766 1687 aa20.3■□□□□ 0.84
PSME1-207ENST00000560420 TRIM37O94972 964 aa20.3■□□□□ 0.84
PSME1-207ENST00000560420 SF3B2Q13435 895 aaKnown RBP20.3■□□□□ 0.84
PSME1-207ENST00000560420 NLRP2Q9NX02 1062 aa20.3■□□□□ 0.84
PSME1-207ENST00000560420 NCAPD2Q15021 1401 aa20.29■□□□□ 0.84
PSME1-207ENST00000560420 BAG6P46379 1132 aa20.29■□□□□ 0.84
PSME1-207ENST00000560420 AMPHP49418 695 aa20.29■□□□□ 0.84
PSME1-207ENST00000560420 RGPD3A6NKT7 1758 aaPredicted RBP20.29■□□□□ 0.84
PSME1-207ENST00000560420 RGPD4Q7Z3J3 1758 aa20.29■□□□□ 0.84
PSME1-207ENST00000560420 IL2RBP14784 551 aa20.28■□□□□ 0.84
PSME1-207ENST00000560420 NSD2O96028 1365 aa20.28■□□□□ 0.84
PSME1-207ENST00000560420 SMG6Q86US8 1419 aaKnown RBP20.27■□□□□ 0.84
PSME1-207ENST00000560420 SHANK3Q9BYB0 1731 aa20.27■□□□□ 0.84
PSME1-207ENST00000560420 CAMKK2Q96RR4 588 aa20.27■□□□□ 0.84
PSME1-207ENST00000560420 POLR3GLQ9BT43 218 aa20.27■□□□□ 0.84
PSME1-207ENST00000560420 MEGF6O75095 1541 aa20.27■□□□□ 0.83
PSME1-207ENST00000560420 PARD3Q8TEW0 1356 aa20.26■□□□□ 0.83
PSME1-207ENST00000560420 EN1Q05925 392 aaPredicted RBP20.26■□□□□ 0.83
PSME1-207ENST00000560420 HSP90AB2PQ58FF8 381 aa20.26■□□□□ 0.83
PSME1-207ENST00000560420 EMILIN1Q9Y6C2 1016 aa20.26■□□□□ 0.83
PSME1-207ENST00000560420 EXOC5O00471 708 aa20.25■□□□□ 0.83
PSME1-207ENST00000560420 MAP2P11137 1827 aaKnown RBP20.25■□□□□ 0.83
PSME1-207ENST00000560420 NHSQ6T4R5 1651 aa20.24■□□□□ 0.83
PSME1-207ENST00000560420 NBPF6Q5VWK0 638 aa20.24■□□□□ 0.83
PSME1-207ENST00000560420 LTV1Q96GA3 475 aaPredicted RBP20.24■□□□□ 0.83
PSME1-207ENST00000560420 NBPF4Q96M43 638 aa20.24■□□□□ 0.83
PSME1-207ENST00000560420 POLKQ9UBT6 870 aa20.24■□□□□ 0.83
PSME1-207ENST00000560420 NUP188Q5SRE5 1749 aa20.24■□□□□ 0.83
PSME1-207ENST00000560420 WASHC2AQ641Q2 1341 aa20.24■□□□□ 0.83
PSME1-207ENST00000560420 PTF1AQ7RTS3 328 aa20.23■□□□□ 0.83
PSME1-207ENST00000560420 EZH2Q15910 746 aaKnown RBP20.22■□□□□ 0.83
PSME1-207ENST00000560420 AMER1Q5JTC6 1135 aaPredicted RBP20.22■□□□□ 0.83
PSME1-207ENST00000560420 PER1O15534 1290 aaPredicted RBP20.21■□□□□ 0.83
PSME1-207ENST00000560420 APBA3O96018 575 aa20.21■□□□□ 0.83
PSME1-207ENST00000560420 BCL11BQ9C0K0 894 aaPredicted RBP20.21■□□□□ 0.83
PSME1-207ENST00000560420 PLSCR1O15162 318 aa20.18■□□□□ 0.82
PSME1-207ENST00000560420 PKD1L3Q7Z443 1732 aa20.17■□□□□ 0.82
PSME1-207ENST00000560420 USHBP1Q8N6Y0 703 aa20.16■□□□□ 0.82
PSME1-207ENST00000560420 KNSTRNQ9Y448 316 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms