RNA–Protein interactions for RNA: ENST00000560414.1

IDH3A-219, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-219ENST00000560414 PIK3C2AO00443 1686 aa20.71■□□□□ 0.91
IDH3A-219ENST00000560414 EVA1CP58658 441 aa20.71■□□□□ 0.91
IDH3A-219ENST00000560414 RBM42Q9BTD8 480 aaKnown RBP20.71■□□□□ 0.91
IDH3A-219ENST00000560414 TIMELESSQ9UNS1 1208 aa20.7■□□□□ 0.9
IDH3A-219ENST00000560414 CAMTA1Q9Y6Y1 1673 aa20.7■□□□□ 0.9
IDH3A-219ENST00000560414 CD163L1Q9NR16 1453 aa20.69■□□□□ 0.9
IDH3A-219ENST00000560414 KRT27Q7Z3Y8 459 aa20.69■□□□□ 0.9
IDH3A-219ENST00000560414 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.69■□□□□ 0.9
IDH3A-219ENST00000560414 CCER1Q8TC90 406 aaPredicted RBP20.69■□□□□ 0.9
IDH3A-219ENST00000560414 USP35Q9P2H5 1018 aa20.69■□□□□ 0.9
IDH3A-219ENST00000560414 SPATA31A1Q5TZJ5 1347 aa20.69■□□□□ 0.9
IDH3A-219ENST00000560414 TTC21AQ8NDW8 1320 aa20.69■□□□□ 0.9
IDH3A-219ENST00000560414 USP47Q96K76 1375 aa20.69■□□□□ 0.9
IDH3A-219ENST00000560414 SOX12O15370 315 aa20.68■□□□□ 0.9
IDH3A-219ENST00000560414 LARP1Q6PKG0 1096 aaKnown RBP20.68■□□□□ 0.9
IDH3A-219ENST00000560414 ZRANB1Q9UGI0 708 aa20.68■□□□□ 0.9
IDH3A-219ENST00000560414 SLIT3O75094 1523 aa20.68■□□□□ 0.9
IDH3A-219ENST00000560414 HDGFL2Q7Z4V5 671 aaPredicted RBP20.67■□□□□ 0.9
IDH3A-219ENST00000560414 PUS7Q96PZ0 661 aaKnown RBP20.67■□□□□ 0.9
IDH3A-219ENST00000560414 LMO7Q8WWI1 1683 aa20.66■□□□□ 0.9
IDH3A-219ENST00000560414 NME9Q86XW9 330 aa20.65■□□□□ 0.9
IDH3A-219ENST00000560414 MON2Q7Z3U7 1717 aa20.64■□□□□ 0.9
IDH3A-219ENST00000560414 FAM182BQ5T319 152 aa20.64■□□□□ 0.89
IDH3A-219ENST00000560414 TERF2IPQ9NYB0 399 aa20.64■□□□□ 0.89
IDH3A-219ENST00000560414 A0A1W2PP64 1363 aa20.63■□□□□ 0.89
IDH3A-219ENST00000560414 AATKQ6ZMQ8 1374 aa20.63■□□□□ 0.89
IDH3A-219ENST00000560414 SLC24A1O60721 1099 aa20.63■□□□□ 0.89
IDH3A-219ENST00000560414 CCDC125Q86Z20 511 aa20.63■□□□□ 0.89
IDH3A-219ENST00000560414 KCNH5Q8NCM2 988 aa20.63■□□□□ 0.89
IDH3A-219ENST00000560414 ARHGEF25Q86VW2 580 aa20.62■□□□□ 0.89
IDH3A-219ENST00000560414 AXIN2Q9Y2T1 843 aa20.62■□□□□ 0.89
IDH3A-219ENST00000560414 COL5A2P05997 1499 aaPredicted RBP20.62■□□□□ 0.89
IDH3A-219ENST00000560414 TMF1P82094 1093 aa20.61■□□□□ 0.89
IDH3A-219ENST00000560414 TCP11L2Q8N4U5 519 aa20.6■□□□□ 0.89
IDH3A-219ENST00000560414 THSD7AQ9UPZ6 1657 aa20.6■□□□□ 0.89
IDH3A-219ENST00000560414 BLMP54132 1417 aaPredicted RBP20.6■□□□□ 0.89
IDH3A-219ENST00000560414 EDC4Q6P2E9 1401 aaKnown RBP20.6■□□□□ 0.89
IDH3A-219ENST00000560414 USP31Q70CQ4 1352 aa20.59■□□□□ 0.89
IDH3A-219ENST00000560414 BARGINQ6ZT62 677 aa20.59■□□□□ 0.89
IDH3A-219ENST00000560414 NFAT5O94916 1531 aa20.58■□□□□ 0.88
IDH3A-219ENST00000560414 COL18A1P39060 1754 aa20.57■□□□□ 0.88
IDH3A-219ENST00000560414 DEFB132Q7Z7B7 95 aa20.57■□□□□ 0.88
IDH3A-219ENST00000560414 NINLQ9Y2I6 1382 aa20.57■□□□□ 0.88
IDH3A-219ENST00000560414 SF3B2Q13435 895 aaKnown RBP20.56■□□□□ 0.88
IDH3A-219ENST00000560414 TOM1L2Q6ZVM7 507 aa20.56■□□□□ 0.88
IDH3A-219ENST00000560414 CRB1P82279 1406 aa20.55■□□□□ 0.88
IDH3A-219ENST00000560414 THRAP3Q9Y2W1 955 aaKnown RBP20.55■□□□□ 0.88
IDH3A-219ENST00000560414 WDR17Q8IZU2 1322 aa20.53■□□□□ 0.88
IDH3A-219ENST00000560414 ANKRD36BQ8N2N9 1353 aa20.53■□□□□ 0.88
IDH3A-219ENST00000560414 CSB-PGBD3P0DP91 1061 aa20.52■□□□□ 0.88
IDH3A-219ENST00000560414 PDE3BQ13370 1112 aa20.52■□□□□ 0.88
IDH3A-219ENST00000560414 CDCA8Q53HL2 280 aa20.52■□□□□ 0.88
IDH3A-219ENST00000560414 AKT1S1Q96B36 256 aa20.52■□□□□ 0.88
IDH3A-219ENST00000560414 RGPD5Q99666 1765 aa20.51■□□□□ 0.87
IDH3A-219ENST00000560414 OVOS2A0A0J9YW53 1432 aa20.51■□□□□ 0.87
IDH3A-219ENST00000560414 OVOS2Q6IE36 1432 aa20.51■□□□□ 0.87
IDH3A-219ENST00000560414 USP54Q70EL1 1684 aa20.51■□□□□ 0.87
IDH3A-219ENST00000560414 FAM196AQ6ZSG2 479 aa20.49■□□□□ 0.87
IDH3A-219ENST00000560414 COG3Q96JB2 828 aa20.49■□□□□ 0.87
IDH3A-219ENST00000560414 TRIM37O94972 964 aa20.48■□□□□ 0.87
IDH3A-219ENST00000560414 FBLN1P23142 703 aa20.48■□□□□ 0.87
IDH3A-219ENST00000560414 VASPP50552 380 aaPredicted RBP20.48■□□□□ 0.87
IDH3A-219ENST00000560414 BAG6P46379 1132 aa20.47■□□□□ 0.87
IDH3A-219ENST00000560414 CARD10Q9BWT7 1032 aa20.47■□□□□ 0.87
IDH3A-219ENST00000560414 HSPA5P11021 654 aaKnown RBP20.46■□□□□ 0.87
IDH3A-219ENST00000560414 GGNBP2Q9H3C7 697 aa20.46■□□□□ 0.87
IDH3A-219ENST00000560414 FYB1O15117 783 aa20.45■□□□□ 0.86
IDH3A-219ENST00000560414 EIF4G2P78344 907 aaKnown RBP eCLIP20.45■□□□□ 0.86
IDH3A-219ENST00000560414 EN1Q05925 392 aaPredicted RBP20.45■□□□□ 0.86
IDH3A-219ENST00000560414 DDB1Q16531 1140 aa20.45■□□□□ 0.86
IDH3A-219ENST00000560414 POLR3GLQ9BT43 218 aa20.45■□□□□ 0.86
IDH3A-219ENST00000560414 LTN1O94822 1766 aa20.44■□□□□ 0.86
IDH3A-219ENST00000560414 ABCC6O95255 1503 aa20.44■□□□□ 0.86
IDH3A-219ENST00000560414 CARD14Q9BXL6 1004 aa20.44■□□□□ 0.86
IDH3A-219ENST00000560414 ERBB3P21860 1342 aa20.44■□□□□ 0.86
IDH3A-219ENST00000560414 PARP4Q9UKK3 1724 aaKnown RBP20.44■□□□□ 0.86
IDH3A-219ENST00000560414 ANKRD24Q8TF21 1146 aa20.43■□□□□ 0.86
IDH3A-219ENST00000560414 NLRP2Q9NX02 1062 aa20.43■□□□□ 0.86
IDH3A-219ENST00000560414 IP6K1Q92551 441 aa20.42■□□□□ 0.86
IDH3A-219ENST00000560414 RGPD1P0DJD0 1748 aa20.41■□□□□ 0.86
IDH3A-219ENST00000560414 LTV1Q96GA3 475 aaPredicted RBP20.41■□□□□ 0.86
IDH3A-219ENST00000560414 CDCA7Q9BWT1 371 aaPredicted RBP20.41■□□□□ 0.86
IDH3A-219ENST00000560414 MAP3K19Q56UN5 1328 aa20.41■□□□□ 0.86
IDH3A-219ENST00000560414 MYOM1P52179 1685 aa20.41■□□□□ 0.86
IDH3A-219ENST00000560414 DISP2A7MBM2 1401 aa20.4■□□□□ 0.86
IDH3A-219ENST00000560414 LRRC37A3O60309 1634 aa20.4■□□□□ 0.86
IDH3A-219ENST00000560414 APBA3O96018 575 aa20.4■□□□□ 0.86
IDH3A-219ENST00000560414 CCDC7Q96M83 1385 aa20.4■□□□□ 0.86
IDH3A-219ENST00000560414 RRS1Q15050 365 aaKnown RBP20.39■□□□□ 0.85
IDH3A-219ENST00000560414 EZH2Q15910 746 aaKnown RBP20.39■□□□□ 0.85
IDH3A-219ENST00000560414 MARCH10Q8NA82 808 aaPredicted RBP20.39■□□□□ 0.85
IDH3A-219ENST00000560414 TNS1Q9HBL0 1735 aaKnown RBP20.39■□□□□ 0.85
IDH3A-219ENST00000560414 NSD3Q9BZ95 1437 aa20.38■□□□□ 0.85
IDH3A-219ENST00000560414 HOXC9P31274 260 aa20.38■□□□□ 0.85
IDH3A-219ENST00000560414 AMPHP49418 695 aa20.38■□□□□ 0.85
IDH3A-219ENST00000560414 SRCAPQ6ZRS2 3230 aa20.37■□□□□ 0.85
IDH3A-219ENST00000560414 WNK3Q9BYP7 1800 aa20.37■□□□□ 0.85
IDH3A-219ENST00000560414 EXOC5O00471 708 aa20.37■□□□□ 0.85
IDH3A-219ENST00000560414 OVOS2A0A0G2JMS6 1433 aa20.36■□□□□ 0.85
IDH3A-219ENST00000560414 CAMKK2Q96RR4 588 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms