RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 OVOS2A0A0G2JMS6 1433 aa19.32■□□□□ 0.68
SMAD3-214ENST00000560402 OVOS2A0A0J9YW53 1432 aa19.32■□□□□ 0.68
SMAD3-214ENST00000560402 OVOS2Q6IE36 1432 aa19.32■□□□□ 0.68
SMAD3-214ENST00000560402 RGPD5Q99666 1765 aa19.32■□□□□ 0.68
SMAD3-214ENST00000560402 TTC21BQ7Z4L5 1316 aa19.31■□□□□ 0.68
SMAD3-214ENST00000560402 SBF2Q86WG5 1849 aa19.31■□□□□ 0.68
SMAD3-214ENST00000560402 PSDA5PKW4 1024 aaPredicted RBP19.3■□□□□ 0.68
SMAD3-214ENST00000560402 CAMKK2Q96RR4 588 aa19.3■□□□□ 0.68
SMAD3-214ENST00000560402 KTN1Q86UP2 1357 aaKnown RBP19.3■□□□□ 0.68
SMAD3-214ENST00000560402 WDR17Q8IZU2 1322 aa19.29■□□□□ 0.68
SMAD3-214ENST00000560402 EZH2Q15910 746 aaKnown RBP19.29■□□□□ 0.68
SMAD3-214ENST00000560402 ZBTB7CA1YPR0 619 aa19.28■□□□□ 0.68
SMAD3-214ENST00000560402 APBA3O96018 575 aa19.28■□□□□ 0.68
SMAD3-214ENST00000560402 TONSLQ96HA7 1378 aa19.28■□□□□ 0.68
SMAD3-214ENST00000560402 CARD11Q9BXL7 1154 aa19.27■□□□□ 0.68
SMAD3-214ENST00000560402 ARHGEF25Q86VW2 580 aa19.26■□□□□ 0.67
SMAD3-214ENST00000560402 CDCA7Q9BWT1 371 aaPredicted RBP19.26■□□□□ 0.67
SMAD3-214ENST00000560402 LTN1O94822 1766 aa19.25■□□□□ 0.67
SMAD3-214ENST00000560402 USP31Q70CQ4 1352 aa19.25■□□□□ 0.67
SMAD3-214ENST00000560402 R3HDM1Q15032 1099 aaKnown RBP19.25■□□□□ 0.67
SMAD3-214ENST00000560402 TOM1L2Q6ZVM7 507 aa19.25■□□□□ 0.67
SMAD3-214ENST00000560402 BCL9O00512 1426 aa19.25■□□□□ 0.67
SMAD3-214ENST00000560402 CD163L1Q9NR16 1453 aa19.24■□□□□ 0.67
SMAD3-214ENST00000560402 DDB1Q16531 1140 aa19.23■□□□□ 0.67
SMAD3-214ENST00000560402 EDC4Q6P2E9 1401 aaKnown RBP19.23■□□□□ 0.67
SMAD3-214ENST00000560402 CCDC7Q96M83 1385 aa19.22■□□□□ 0.67
SMAD3-214ENST00000560402 PUS7Q96PZ0 661 aaKnown RBP19.21■□□□□ 0.67
SMAD3-214ENST00000560402 CARD10Q9BWT7 1032 aa19.21■□□□□ 0.67
SMAD3-214ENST00000560402 AXIN2Q9Y2T1 843 aa19.21■□□□□ 0.67
SMAD3-214ENST00000560402 NINLQ9Y2I6 1382 aa19.2■□□□□ 0.66
SMAD3-214ENST00000560402 TNS2Q63HR2 1409 aa19.2■□□□□ 0.66
SMAD3-214ENST00000560402 NBPF14Q5TI25 921 aa19.2■□□□□ 0.66
SMAD3-214ENST00000560402 HDGFL2Q7Z4V5 671 aaPredicted RBP19.2■□□□□ 0.66
SMAD3-214ENST00000560402 FAM208AQ9UK61 1670 aaKnown RBP19.2■□□□□ 0.66
SMAD3-214ENST00000560402 CSB-PGBD3P0DP91 1061 aa19.18■□□□□ 0.66
SMAD3-214ENST00000560402 SOX12O15370 315 aa19.17■□□□□ 0.66
SMAD3-214ENST00000560402 SLC24A1O60721 1099 aa19.17■□□□□ 0.66
SMAD3-214ENST00000560402 NHSQ6T4R5 1651 aa19.17■□□□□ 0.66
SMAD3-214ENST00000560402 PLSCR1O15162 318 aa19.16■□□□□ 0.66
SMAD3-214ENST00000560402 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.16■□□□□ 0.66
SMAD3-214ENST00000560402 TERF2IPQ9NYB0 399 aa19.16■□□□□ 0.66
SMAD3-214ENST00000560402 A0A1W2PP64 1363 aa19.16■□□□□ 0.66
SMAD3-214ENST00000560402 TMC1Q8TDI8 760 aa19.15■□□□□ 0.66
SMAD3-214ENST00000560402 BCL11BQ9C0K0 894 aaPredicted RBP19.15■□□□□ 0.66
SMAD3-214ENST00000560402 ERBB3P21860 1342 aa19.15■□□□□ 0.66
SMAD3-214ENST00000560402 NME9Q86XW9 330 aa19.13■□□□□ 0.65
SMAD3-214ENST00000560402 CASZ1Q86V15 1759 aa19.13■□□□□ 0.65
SMAD3-214ENST00000560402 MARCH10Q8NA82 808 aaPredicted RBP19.12■□□□□ 0.65
SMAD3-214ENST00000560402 EXOC5O00471 708 aa19.11■□□□□ 0.65
SMAD3-214ENST00000560402 SLC12A5Q9H2X9 1139 aa19.11■□□□□ 0.65
SMAD3-214ENST00000560402 CCER1Q8TC90 406 aaPredicted RBP19.1■□□□□ 0.65
SMAD3-214ENST00000560402 TESK2Q96S53 571 aa19.09■□□□□ 0.65
SMAD3-214ENST00000560402 BTAF1O14981 1849 aa19.07■□□□□ 0.64
SMAD3-214ENST00000560402 ANKRD36BQ8N2N9 1353 aa19.06■□□□□ 0.64
SMAD3-214ENST00000560402 ST20-MTHFSA0A0A6YYL1 179 aa19.06■□□□□ 0.64
SMAD3-214ENST00000560402 IL2RBP14784 551 aa19.06■□□□□ 0.64
SMAD3-214ENST00000560402 ANKRD24Q8TF21 1146 aa19.06■□□□□ 0.64
SMAD3-214ENST00000560402 SPON1Q9HCB6 807 aa19.06■□□□□ 0.64
SMAD3-214ENST00000560402 NLRP2Q9NX02 1062 aa19.06■□□□□ 0.64
SMAD3-214ENST00000560402 KIF20BQ96Q89 1820 aa19.04■□□□□ 0.64
SMAD3-214ENST00000560402 KCNQ2O43526 872 aa19.04■□□□□ 0.64
SMAD3-214ENST00000560402 ANO8Q9HCE9 1232 aaPredicted RBP19.04■□□□□ 0.64
SMAD3-214ENST00000560402 USP47Q96K76 1375 aa19.04■□□□□ 0.64
SMAD3-214ENST00000560402 PAPPAQ13219 1627 aa19.03■□□□□ 0.64
SMAD3-214ENST00000560402 PTF1AQ7RTS3 328 aa19.03■□□□□ 0.64
SMAD3-214ENST00000560402 RTL1A6NKG5 1358 aa19.03■□□□□ 0.64
SMAD3-214ENST00000560402 IP6K1Q92551 441 aa19.02■□□□□ 0.64
SMAD3-214ENST00000560402 COG3Q96JB2 828 aa19.02■□□□□ 0.64
SMAD3-214ENST00000560402 PPP1R1BQ9UD71 204 aaPredicted RBP19.02■□□□□ 0.64
SMAD3-214ENST00000560402 TXNRD1Q16881 649 aa19.01■□□□□ 0.63
SMAD3-214ENST00000560402 TMF1P82094 1093 aa19■□□□□ 0.63
SMAD3-214ENST00000560402 PROM2Q8N271 834 aa19■□□□□ 0.63
SMAD3-214ENST00000560402 SHANK3Q9BYB0 1731 aa19■□□□□ 0.63
SMAD3-214ENST00000560402 RGPD2P0DJD1 1756 aa18.99■□□□□ 0.63
SMAD3-214ENST00000560402 MYOM1P52179 1685 aa18.99■□□□□ 0.63
SMAD3-214ENST00000560402 STK32BQ9NY57 414 aa18.99■□□□□ 0.63
SMAD3-214ENST00000560402 QSER1Q2KHR3 1735 aa18.99■□□□□ 0.63
SMAD3-214ENST00000560402 DOT1LQ8TEK3 1739 aa18.99■□□□□ 0.63
SMAD3-214ENST00000560402 KAT6BQ8WYB5 2073 aa18.99■□□□□ 0.63
SMAD3-214ENST00000560402 MAP3K19Q56UN5 1328 aa18.98■□□□□ 0.63
SMAD3-214ENST00000560402 CDCA8Q53HL2 280 aa18.97■□□□□ 0.63
SMAD3-214ENST00000560402 HOXC9P31274 260 aa18.96■□□□□ 0.63
SMAD3-214ENST00000560402 SLC15A2Q16348 729 aa18.96■□□□□ 0.63
SMAD3-214ENST00000560402 SMG6Q86US8 1419 aaKnown RBP18.95■□□□□ 0.62
SMAD3-214ENST00000560402 AMPHP49418 695 aa18.95■□□□□ 0.62
SMAD3-214ENST00000560402 ACSBG1Q96GR2 724 aa18.95■□□□□ 0.62
SMAD3-214ENST00000560402 KIF24Q5T7B8 1368 aa18.93■□□□□ 0.62
SMAD3-214ENST00000560402 TIMELESSQ9UNS1 1208 aa18.93■□□□□ 0.62
SMAD3-214ENST00000560402 LY75O60449 1722 aa18.93■□□□□ 0.62
SMAD3-214ENST00000560402 MEGF6O75095 1541 aa18.92■□□□□ 0.62
SMAD3-214ENST00000560402 DCAF8L1A6NGE4 600 aa18.92■□□□□ 0.62
SMAD3-214ENST00000560402 LTV1Q96GA3 475 aaPredicted RBP18.92■□□□□ 0.62
SMAD3-214ENST00000560402 CLSPNQ9HAW4 1339 aa18.92■□□□□ 0.62
SMAD3-214ENST00000560402 ANKRD26Q9UPS8 1709 aa18.91■□□□□ 0.62
SMAD3-214ENST00000560402 FYB1O15117 783 aa18.9■□□□□ 0.62
SMAD3-214ENST00000560402 ZBTB7AO95365 584 aa18.9■□□□□ 0.62
SMAD3-214ENST00000560402 MTFR1LQ9H019 292 aa18.9■□□□□ 0.62
SMAD3-214ENST00000560402 CGNL1Q0VF96 1302 aa18.9■□□□□ 0.62
SMAD3-214ENST00000560402 TUBGCP6Q96RT7 1819 aa18.89■□□□□ 0.61
SMAD3-214ENST00000560402 SLC27A3Q5K4L6 730 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms