RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 KCNH5Q8NCM2 988 aa21.34■■□□□ 1.01
SNRPA1-210ENST00000560383 PARD3Q8TEW0 1356 aa21.33■■□□□ 1
SNRPA1-210ENST00000560383 LRRC37A3O60309 1634 aa21.33■■□□□ 1
SNRPA1-210ENST00000560383 PDE3BQ13370 1112 aa21.32■■□□□ 1
SNRPA1-210ENST00000560383 SLC12A5Q9H2X9 1139 aa21.32■■□□□ 1
SNRPA1-210ENST00000560383 NINLQ9Y2I6 1382 aa21.32■■□□□ 1
SNRPA1-210ENST00000560383 PEAK1Q9H792 1746 aa21.31■■□□□ 1
SNRPA1-210ENST00000560383 RREB1Q92766 1687 aa21.31■■□□□ 1
SNRPA1-210ENST00000560383 RGPD5Q99666 1765 aa21.31■■□□□ 1
SNRPA1-210ENST00000560383 C11orf95C9JLR9 678 aaPredicted RBP21.3■■□□□ 1
SNRPA1-210ENST00000560383 EN1Q05925 392 aaPredicted RBP21.3■■□□□ 1
SNRPA1-210ENST00000560383 ARHGEF25Q86VW2 580 aa21.3■■□□□ 1
SNRPA1-210ENST00000560383 TMC1Q8TDI8 760 aa21.3■■□□□ 1
SNRPA1-210ENST00000560383 WDR17Q8IZU2 1322 aa21.29■■□□□ 1
SNRPA1-210ENST00000560383 USP31Q70CQ4 1352 aa21.29■■□□□ 1
SNRPA1-210ENST00000560383 TMF1P82094 1093 aa21.29■■□□□ 1
SNRPA1-210ENST00000560383 TRIM37O94972 964 aa21.28■■□□□ 1
SNRPA1-210ENST00000560383 HDGFL2Q7Z4V5 671 aaPredicted RBP21.28■■□□□ 1
SNRPA1-210ENST00000560383 TERF2IPQ9NYB0 399 aa21.28■■□□□ 1
SNRPA1-210ENST00000560383 RGPD3A6NKT7 1758 aaPredicted RBP21.28■■□□□ 1
SNRPA1-210ENST00000560383 RGPD4Q7Z3J3 1758 aa21.28■■□□□ 1
SNRPA1-210ENST00000560383 A0A1W2PP64 1363 aa21.27■■□□□ 1
SNRPA1-210ENST00000560383 ZBTB7CA1YPR0 619 aa21.27■■□□□ 1
SNRPA1-210ENST00000560383 OVOS2A0A0G2JMS6 1433 aa21.27■■□□□ 1
SNRPA1-210ENST00000560383 OVOS2A0A0J9YW53 1432 aa21.27■■□□□ 1
SNRPA1-210ENST00000560383 OVOS2Q6IE36 1432 aa21.27■■□□□ 1
SNRPA1-210ENST00000560383 EDC4Q6P2E9 1401 aaKnown RBP21.27■■□□□ 1
SNRPA1-210ENST00000560383 AXIN2Q9Y2T1 843 aa21.26■□□□□ 0.99
SNRPA1-210ENST00000560383 SBF2Q86WG5 1849 aa21.26■□□□□ 0.99
SNRPA1-210ENST00000560383 NUP188Q5SRE5 1749 aa21.25■□□□□ 0.99
SNRPA1-210ENST00000560383 TOM1L2Q6ZVM7 507 aa21.25■□□□□ 0.99
SNRPA1-210ENST00000560383 CAMKK2Q96RR4 588 aa21.25■□□□□ 0.99
SNRPA1-210ENST00000560383 LTN1O94822 1766 aa21.25■□□□□ 0.99
SNRPA1-210ENST00000560383 CDCA8Q53HL2 280 aa21.24■□□□□ 0.99
SNRPA1-210ENST00000560383 CDCA7Q9BWT1 371 aaPredicted RBP21.24■□□□□ 0.99
SNRPA1-210ENST00000560383 APBA3O96018 575 aa21.23■□□□□ 0.99
SNRPA1-210ENST00000560383 EZH2Q15910 746 aaKnown RBP21.23■□□□□ 0.99
SNRPA1-210ENST00000560383 BCL9O00512 1426 aa21.22■□□□□ 0.99
SNRPA1-210ENST00000560383 CARD10Q9BWT7 1032 aa21.22■□□□□ 0.99
SNRPA1-210ENST00000560383 DDB1Q16531 1140 aa21.21■□□□□ 0.99
SNRPA1-210ENST00000560383 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.21■□□□□ 0.99
SNRPA1-210ENST00000560383 ANKRD36BQ8N2N9 1353 aa21.21■□□□□ 0.99
SNRPA1-210ENST00000560383 CCDC7Q96M83 1385 aa21.21■□□□□ 0.99
SNRPA1-210ENST00000560383 PSDA5PKW4 1024 aaPredicted RBP21.2■□□□□ 0.98
SNRPA1-210ENST00000560383 NME9Q86XW9 330 aa21.2■□□□□ 0.98
SNRPA1-210ENST00000560383 SOX12O15370 315 aa21.19■□□□□ 0.98
SNRPA1-210ENST00000560383 EIF4G2P78344 907 aaKnown RBP eCLIP21.18■□□□□ 0.98
SNRPA1-210ENST00000560383 FAM208AQ9UK61 1670 aaKnown RBP21.16■□□□□ 0.98
SNRPA1-210ENST00000560383 TNS2Q63HR2 1409 aa21.16■□□□□ 0.98
SNRPA1-210ENST00000560383 ERBB3P21860 1342 aa21.16■□□□□ 0.98
SNRPA1-210ENST00000560383 CSB-PGBD3P0DP91 1061 aa21.16■□□□□ 0.98
SNRPA1-210ENST00000560383 R3HDM1Q15032 1099 aaKnown RBP21.16■□□□□ 0.98
SNRPA1-210ENST00000560383 HSPA5P11021 654 aaKnown RBP21.14■□□□□ 0.97
SNRPA1-210ENST00000560383 PLSCR1O15162 318 aa21.12■□□□□ 0.97
SNRPA1-210ENST00000560383 MARCH10Q8NA82 808 aaPredicted RBP21.11■□□□□ 0.97
SNRPA1-210ENST00000560383 BCL11BQ9C0K0 894 aaPredicted RBP21.11■□□□□ 0.97
SNRPA1-210ENST00000560383 NHSQ6T4R5 1651 aa21.1■□□□□ 0.97
SNRPA1-210ENST00000560383 NBPF14Q5TI25 921 aa21.1■□□□□ 0.97
SNRPA1-210ENST00000560383 EXOC5O00471 708 aa21.09■□□□□ 0.97
SNRPA1-210ENST00000560383 FYB1O15117 783 aa21.08■□□□□ 0.97
SNRPA1-210ENST00000560383 COG3Q96JB2 828 aa21.08■□□□□ 0.97
SNRPA1-210ENST00000560383 MYOM1P52179 1685 aa21.08■□□□□ 0.96
SNRPA1-210ENST00000560383 ANKRD24Q8TF21 1146 aa21.07■□□□□ 0.96
SNRPA1-210ENST00000560383 CARD14Q9BXL6 1004 aa21.07■□□□□ 0.96
SNRPA1-210ENST00000560383 ADRA2BP18089 450 aa21.05■□□□□ 0.96
SNRPA1-210ENST00000560383 IP6K1Q92551 441 aa21.05■□□□□ 0.96
SNRPA1-210ENST00000560383 NLRP2Q9NX02 1062 aa21.05■□□□□ 0.96
SNRPA1-210ENST00000560383 KIF20BQ96Q89 1820 aa21.04■□□□□ 0.96
SNRPA1-210ENST00000560383 IL2RBP14784 551 aa21.04■□□□□ 0.96
SNRPA1-210ENST00000560383 RTL1A6NKG5 1358 aa21.03■□□□□ 0.96
SNRPA1-210ENST00000560383 CASZ1Q86V15 1759 aa21.02■□□□□ 0.96
SNRPA1-210ENST00000560383 PTF1AQ7RTS3 328 aa21.02■□□□□ 0.96
SNRPA1-210ENST00000560383 GGNBP2Q9H3C7 697 aa21.02■□□□□ 0.96
SNRPA1-210ENST00000560383 NSD3Q9BZ95 1437 aa21.02■□□□□ 0.96
SNRPA1-210ENST00000560383 MAP3K19Q56UN5 1328 aa21.01■□□□□ 0.95
SNRPA1-210ENST00000560383 BTAF1O14981 1849 aa20.99■□□□□ 0.95
SNRPA1-210ENST00000560383 HOXC9P31274 260 aa20.98■□□□□ 0.95
SNRPA1-210ENST00000560383 FBLN1P23142 703 aa20.97■□□□□ 0.95
SNRPA1-210ENST00000560383 PROM2Q8N271 834 aa20.97■□□□□ 0.95
SNRPA1-210ENST00000560383 ANO8Q9HCE9 1232 aaPredicted RBP20.97■□□□□ 0.95
SNRPA1-210ENST00000560383 CGNL1Q0VF96 1302 aa20.97■□□□□ 0.95
SNRPA1-210ENST00000560383 RGPD2P0DJD1 1756 aa20.97■□□□□ 0.95
SNRPA1-210ENST00000560383 POLR3GLQ9BT43 218 aa20.96■□□□□ 0.95
SNRPA1-210ENST00000560383 PAPPAQ13219 1627 aa20.96■□□□□ 0.95
SNRPA1-210ENST00000560383 SHANK3Q9BYB0 1731 aa20.95■□□□□ 0.94
SNRPA1-210ENST00000560383 AMPHP49418 695 aa20.95■□□□□ 0.94
SNRPA1-210ENST00000560383 SPON1Q9HCB6 807 aa20.95■□□□□ 0.94
SNRPA1-210ENST00000560383 KCNQ2O43526 872 aa20.94■□□□□ 0.94
SNRPA1-210ENST00000560383 TXNRD1Q16881 649 aa20.94■□□□□ 0.94
SNRPA1-210ENST00000560383 PANK3Q9H999 370 aa20.94■□□□□ 0.94
SNRPA1-210ENST00000560383 KIF24Q5T7B8 1368 aa20.94■□□□□ 0.94
SNRPA1-210ENST00000560383 RRS1Q15050 365 aaKnown RBP20.93■□□□□ 0.94
SNRPA1-210ENST00000560383 SMG6Q86US8 1419 aaKnown RBP20.93■□□□□ 0.94
SNRPA1-210ENST00000560383 ANKRD26Q9UPS8 1709 aa20.92■□□□□ 0.94
SNRPA1-210ENST00000560383 KIF7Q2M1P5 1343 aa20.92■□□□□ 0.94
SNRPA1-210ENST00000560383 DOT1LQ8TEK3 1739 aa20.91■□□□□ 0.94
SNRPA1-210ENST00000560383 LTV1Q96GA3 475 aaPredicted RBP20.91■□□□□ 0.94
SNRPA1-210ENST00000560383 MEGF6O75095 1541 aa20.9■□□□□ 0.94
SNRPA1-210ENST00000560383 ACSBG1Q96GR2 724 aa20.9■□□□□ 0.94
SNRPA1-210ENST00000560383 KAT6BQ8WYB5 2073 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms