RNA–Protein interactions for RNA: ENST00000560311.1

IRF9-208, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-208ENST00000560311 C14orf37Q86TY3 774 aa9.61□□□□□ -0.87
IRF9-208ENST00000560311 AMOTL2Q9Y2J4 779 aa9.61□□□□□ -0.87
IRF9-208ENST00000560311 ANKRD30BQ9BXX2 1392 aa9.61□□□□□ -0.87
IRF9-208ENST00000560311 LAMC1P11047 1609 aa9.6□□□□□ -0.87
IRF9-208ENST00000560311 NRXN1Q9ULB1 1477 aa9.6□□□□□ -0.87
IRF9-208ENST00000560311 MRPL50Q8N5N7 158 aaKnown RBP9.6□□□□□ -0.87
IRF9-208ENST00000560311 OXER1Q8TDS5 423 aa9.6□□□□□ -0.87
IRF9-208ENST00000560311 KNDC1Q76NI1 1749 aa9.59□□□□□ -0.87
IRF9-208ENST00000560311 ZBED2Q9BTP6 218 aa9.59□□□□□ -0.87
IRF9-208ENST00000560311 AHDC1Q5TGY3 1603 aaPredicted RBP9.59□□□□□ -0.87
IRF9-208ENST00000560311 ROBO2Q9HCK4 1378 aa9.59□□□□□ -0.87
IRF9-208ENST00000560311 ADGRF5Q8IZF2 1346 aa9.58□□□□□ -0.88
IRF9-208ENST00000560311 MST1RQ04912 1400 aa9.58□□□□□ -0.88
IRF9-208ENST00000560311 COL16A1Q07092 1604 aaPredicted RBP9.58□□□□□ -0.88
IRF9-208ENST00000560311 PTPREP23469 700 aa9.58□□□□□ -0.88
IRF9-208ENST00000560311 RGL3Q3MIN7 710 aa9.58□□□□□ -0.88
IRF9-208ENST00000560311 PHLPP1O60346 1717 aa9.58□□□□□ -0.88
IRF9-208ENST00000560311 CDC42BPGQ6DT37 1551 aa9.58□□□□□ -0.88
IRF9-208ENST00000560311 TECPR2O15040 1411 aa9.57□□□□□ -0.88
IRF9-208ENST00000560311 Q6ZNB5 142 aa9.57□□□□□ -0.88
IRF9-208ENST00000560311 ATF3P18847 181 aa9.56□□□□□ -0.88
IRF9-208ENST00000560311 HRCP23327 699 aa9.56□□□□□ -0.88
IRF9-208ENST00000560311 FOSBP53539 338 aa9.56□□□□□ -0.88
IRF9-208ENST00000560311 CADPS2Q86UW7 1296 aa9.56□□□□□ -0.88
IRF9-208ENST00000560311 C19orf44Q9H6X5 657 aa9.56□□□□□ -0.88
IRF9-208ENST00000560311 LRPPRCP42704 1394 aaKnown RBP9.55□□□□□ -0.88
IRF9-208ENST00000560311 SLAIN2Q9P270 581 aa9.55□□□□□ -0.88
IRF9-208ENST00000560311 NHSL1Q5SYE7 1610 aa9.55□□□□□ -0.88
IRF9-208ENST00000560311 YTHDC2Q9H6S0 1430 aaKnown RBP9.54□□□□□ -0.88
IRF9-208ENST00000560311 ADGRB1O14514 1584 aa9.54□□□□□ -0.88
IRF9-208ENST00000560311 C1orf167Q5SNV9 1468 aa9.53□□□□□ -0.88
IRF9-208ENST00000560311 PLEKHH1Q9ULM0 1364 aa9.52□□□□□ -0.88
IRF9-208ENST00000560311 SHPRHQ149N8 1683 aa9.52□□□□□ -0.89
IRF9-208ENST00000560311 BRINP3Q76B58 766 aa9.52□□□□□ -0.89
IRF9-208ENST00000560311 ADAM33Q9BZ11 813 aa9.52□□□□□ -0.89
IRF9-208ENST00000560311 DLC1Q96QB1 1528 aa9.51□□□□□ -0.89
IRF9-208ENST00000560311 ABCC11Q96J66 1382 aa9.51□□□□□ -0.89
IRF9-208ENST00000560311 JCADQ9P266 1359 aa9.51□□□□□ -0.89
IRF9-208ENST00000560311 NBPF3Q9H094 633 aa9.51□□□□□ -0.89
IRF9-208ENST00000560311 DHX57Q6P158 1386 aaKnown RBP9.5□□□□□ -0.89
IRF9-208ENST00000560311 ADGRB2O60241 1585 aa9.5□□□□□ -0.89
IRF9-208ENST00000560311 LRP6O75581 1613 aa9.5□□□□□ -0.89
IRF9-208ENST00000560311 ITGBL1O95965 494 aaPredicted RBP9.5□□□□□ -0.89
IRF9-208ENST00000560311 TMEM132EQ6IEE7 984 aa9.5□□□□□ -0.89
IRF9-208ENST00000560311 ILDR2Q71H61 639 aa9.5□□□□□ -0.89
IRF9-208ENST00000560311 STK26Q9P289 416 aa9.5□□□□□ -0.89
IRF9-208ENST00000560311 FMN2Q9NZ56 1722 aa9.5□□□□□ -0.89
IRF9-208ENST00000560311 CFAP70Q5T0N1 1121 aa9.49□□□□□ -0.89
IRF9-208ENST00000560311 C14orf93Q9H972 538 aaKnown RBP9.49□□□□□ -0.89
IRF9-208ENST00000560311 ZDHHC16Q969W1 377 aa9.48□□□□□ -0.89
IRF9-208ENST00000560311 BCAMP50895 628 aa9.47□□□□□ -0.89
IRF9-208ENST00000560311 PPP1R15BQ5SWA1 713 aa9.47□□□□□ -0.89
IRF9-208ENST00000560311 WAPLQ7Z5K2 1190 aa9.47□□□□□ -0.89
IRF9-208ENST00000560311 DCAF11Q8TEB1 546 aa9.47□□□□□ -0.89
IRF9-208ENST00000560311 KIF1AQ12756 1690 aa9.47□□□□□ -0.89
IRF9-208ENST00000560311 ARHGEF28Q8N1W1 1705 aaKnown RBP9.47□□□□□ -0.89
IRF9-208ENST00000560311 KIAA1210Q9ULL0 1709 aa9.46□□□□□ -0.89
IRF9-208ENST00000560311 ANKK1Q8NFD2 765 aa9.46□□□□□ -0.9
IRF9-208ENST00000560311 ANO8Q9HCE9 1232 aaPredicted RBP9.46□□□□□ -0.9
IRF9-208ENST00000560311 PXDNQ92626 1479 aa9.46□□□□□ -0.9
IRF9-208ENST00000560311 EVI5O60447 810 aa9.45□□□□□ -0.9
IRF9-208ENST00000560311 PROX2Q3B8N5 592 aa9.45□□□□□ -0.9
IRF9-208ENST00000560311 DDX17Q92841 729 aaKnown RBP9.45□□□□□ -0.9
IRF9-208ENST00000560311 CRISPLD2Q9H0B8 497 aa9.45□□□□□ -0.9
IRF9-208ENST00000560311 KDM2AQ9Y2K7 1162 aa9.45□□□□□ -0.9
IRF9-208ENST00000560311 SPATA31A6Q5VVP1 1343 aa9.45□□□□□ -0.9
IRF9-208ENST00000560311 PNPLA6Q8IY17 1366 aa9.45□□□□□ -0.9
IRF9-208ENST00000560311 PRAM1Q96QH2 718 aa9.44□□□□□ -0.9
IRF9-208ENST00000560311 ORAI2Q96SN7 254 aa9.44□□□□□ -0.9
IRF9-208ENST00000560311 USP32Q8NFA0 1604 aa9.44□□□□□ -0.9
IRF9-208ENST00000560311 COL22A1Q8NFW1 1626 aaPredicted RBP9.44□□□□□ -0.9
IRF9-208ENST00000560311 TULP4Q9NRJ4 1543 aa9.43□□□□□ -0.9
IRF9-208ENST00000560311 ANKARQ7Z5J8 1434 aa9.43□□□□□ -0.9
IRF9-208ENST00000560311 LCE2BO14633 110 aa9.43□□□□□ -0.9
IRF9-208ENST00000560311 SAFB2Q14151 953 aaKnown RBP eCLIP9.43□□□□□ -0.9
IRF9-208ENST00000560311 HS6ST3Q8IZP7 471 aa9.43□□□□□ -0.9
IRF9-208ENST00000560311 SIRT1Q96EB6 747 aa9.43□□□□□ -0.9
IRF9-208ENST00000560311 SOS2Q07890 1332 aaPredicted RBP9.42□□□□□ -0.9
IRF9-208ENST00000560311 RGS17Q9UGC6 210 aaPredicted RBP9.42□□□□□ -0.9
IRF9-208ENST00000560311 RABGEF1Q9UJ41 708 aa9.42□□□□□ -0.9
IRF9-208ENST00000560311 TRAK1Q9UPV9 953 aa9.42□□□□□ -0.9
IRF9-208ENST00000560311 EIF3AQ14152 1382 aaKnown RBP9.41□□□□□ -0.9
IRF9-208ENST00000560311 NPHP3Q7Z494 1330 aa9.41□□□□□ -0.9
IRF9-208ENST00000560311 NUTM2FA1L443 756 aa9.41□□□□□ -0.9
IRF9-208ENST00000560311 COL9A1P20849 921 aa9.41□□□□□ -0.9
IRF9-208ENST00000560311 ESCO1Q5FWF5 840 aa9.41□□□□□ -0.9
IRF9-208ENST00000560311 MEX3CQ5U5Q3 659 aaKnown RBP9.41□□□□□ -0.9
IRF9-208ENST00000560311 POGKQ9P215 609 aa9.41□□□□□ -0.9
IRF9-208ENST00000560311 TRPM1Q7Z4N2 1603 aa9.41□□□□□ -0.9
IRF9-208ENST00000560311 ATP7BP35670 1465 aa9.4□□□□□ -0.9
IRF9-208ENST00000560311 PPP1R3GB7ZBB8 358 aa9.4□□□□□ -0.9
IRF9-208ENST00000560311 SOCS7O14512 581 aa9.4□□□□□ -0.9
IRF9-208ENST00000560311 TRIM26Q12899 539 aaPredicted RBP9.4□□□□□ -0.9
IRF9-208ENST00000560311 LRRC59Q96AG4 307 aaKnown RBP9.4□□□□□ -0.9
IRF9-208ENST00000560311 TOPAZ1Q8N9V7 1692 aa9.39□□□□□ -0.91
IRF9-208ENST00000560311 MINK1Q8N4C8 1332 aaPredicted RBP9.39□□□□□ -0.91
IRF9-208ENST00000560311 SOWAHBA6NEL2 793 aa9.39□□□□□ -0.91
IRF9-208ENST00000560311 NUTM2BA6NNL0 878 aaPredicted RBP9.39□□□□□ -0.91
IRF9-208ENST00000560311 NUTM2EB1AL46 878 aaPredicted RBP9.39□□□□□ -0.91
IRF9-208ENST00000560311 KCNC4Q03721 635 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms