RNA–Protein interactions for RNA: ENST00000560047.1

CRTC3-207, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 565 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-207ENST00000560047 POM121Q96HA1 1249 aa12.68□□□□□ -0.38
CRTC3-207ENST00000560047 ALDH1A1P00352 501 aa12.67□□□□□ -0.38
CRTC3-207ENST00000560047 ZNF330Q9Y3S2 320 aaPredicted RBP12.67□□□□□ -0.38
CRTC3-207ENST00000560047 ARID5BQ14865 1188 aa12.66□□□□□ -0.38
CRTC3-207ENST00000560047 WASHC4Q2M389 1173 aa12.66□□□□□ -0.38
CRTC3-207ENST00000560047 CDK15Q96Q40 435 aa12.66□□□□□ -0.38
CRTC3-207ENST00000560047 DZIP3Q86Y13 1208 aaKnown RBP12.64□□□□□ -0.39
CRTC3-207ENST00000560047 SLC10A4Q96EP9 437 aa12.64□□□□□ -0.39
CRTC3-207ENST00000560047 CDV3Q9UKY7 258 aaKnown RBP12.64□□□□□ -0.39
CRTC3-207ENST00000560047 TLL2Q9Y6L7 1015 aa12.64□□□□□ -0.39
CRTC3-207ENST00000560047 ZNF592Q92610 1267 aa12.63□□□□□ -0.39
CRTC3-207ENST00000560047 CLUAP1Q96AJ1 413 aa12.63□□□□□ -0.39
CRTC3-207ENST00000560047 MAP4K5Q9Y4K4 846 aa12.63□□□□□ -0.39
CRTC3-207ENST00000560047 WASF2Q9Y6W5 498 aa12.63□□□□□ -0.39
CRTC3-207ENST00000560047 J3QL48 77 aa12.62□□□□□ -0.39
CRTC3-207ENST00000560047 MCCD1P59942 119 aaPredicted RBP12.62□□□□□ -0.39
CRTC3-207ENST00000560047 VASH1Q7L8A9 365 aaPredicted RBP12.62□□□□□ -0.39
CRTC3-207ENST00000560047 PCDHB9Q9Y5E1 797 aa12.62□□□□□ -0.39
CRTC3-207ENST00000560047 SMPD1P17405 629 aa12.61□□□□□ -0.39
CRTC3-207ENST00000560047 FAM187AA6NFU0 413 aa12.6□□□□□ -0.39
CRTC3-207ENST00000560047 A6NJR5 290 aa12.6□□□□□ -0.39
CRTC3-207ENST00000560047 DGAT1O75907 488 aa12.6□□□□□ -0.39
CRTC3-207ENST00000560047 ADH1CP00326 375 aa12.6□□□□□ -0.39
CRTC3-207ENST00000560047 EIF4G2P78344 907 aaKnown RBP eCLIP12.6□□□□□ -0.39
CRTC3-207ENST00000560047 GRM5P41594 1212 aa12.59□□□□□ -0.39
CRTC3-207ENST00000560047 VAC14Q08AM6 782 aa12.59□□□□□ -0.39
CRTC3-207ENST00000560047 NR5A1Q13285 461 aa12.59□□□□□ -0.39
CRTC3-207ENST00000560047 PKDCCQ504Y2 493 aa12.59□□□□□ -0.39
CRTC3-207ENST00000560047 NESP48681 1621 aa12.59□□□□□ -0.39
CRTC3-207ENST00000560047 NBPF20Q3BBV1 942 aa12.58□□□□□ -0.4
CRTC3-207ENST00000560047 CADPSQ9ULU8 1353 aa12.57□□□□□ -0.4
CRTC3-207ENST00000560047 PROSER2Q86WR7 435 aaPredicted RBP12.57□□□□□ -0.4
CRTC3-207ENST00000560047 KCTD15Q96SI1 283 aaPredicted RBP12.57□□□□□ -0.4
CRTC3-207ENST00000560047 SOX11P35716 441 aa12.55□□□□□ -0.4
CRTC3-207ENST00000560047 FNBP4Q8N3X1 1017 aaPredicted RBP12.55□□□□□ -0.4
CRTC3-207ENST00000560047 NNTQ13423 1086 aa12.54□□□□□ -0.4
CRTC3-207ENST00000560047 FSHRP23945 695 aa12.53□□□□□ -0.4
CRTC3-207ENST00000560047 HPS1Q92902 700 aa12.53□□□□□ -0.4
CRTC3-207ENST00000560047 ZMYND15Q9H091 742 aa12.53□□□□□ -0.4
CRTC3-207ENST00000560047 AVPP01185 164 aa12.52□□□□□ -0.41
CRTC3-207ENST00000560047 SEMA3FQ13275 785 aa12.52□□□□□ -0.41
CRTC3-207ENST00000560047 CFTRP13569 1480 aa12.52□□□□□ -0.41
CRTC3-207ENST00000560047 Q6ZNB5 142 aa12.51□□□□□ -0.41
CRTC3-207ENST00000560047 CEP126Q9P2H0 1117 aa12.51□□□□□ -0.41
CRTC3-207ENST00000560047 ESPNB1AK53 854 aa12.5□□□□□ -0.41
CRTC3-207ENST00000560047 GIGYF1O75420 1035 aaPredicted RBP12.5□□□□□ -0.41
CRTC3-207ENST00000560047 RNF20Q5VTR2 975 aa12.5□□□□□ -0.41
CRTC3-207ENST00000560047 ERICH6Q7L0X2 663 aa12.5□□□□□ -0.41
CRTC3-207ENST00000560047 SEPT12Q8IYM1 358 aa12.5□□□□□ -0.41
CRTC3-207ENST00000560047 NR3C2P08235 984 aa12.49□□□□□ -0.41
CRTC3-207ENST00000560047 DHX9Q08211 1270 aaKnown RBP12.49□□□□□ -0.41
CRTC3-207ENST00000560047 INTS6LQ5JSJ4 861 aaKnown RBP12.49□□□□□ -0.41
CRTC3-207ENST00000560047 C14orf37Q86TY3 774 aa12.49□□□□□ -0.41
CRTC3-207ENST00000560047 CCDC125Q86Z20 511 aa12.49□□□□□ -0.41
CRTC3-207ENST00000560047 CCDC116Q8IYX3 515 aa12.49□□□□□ -0.41
CRTC3-207ENST00000560047 LAMC3Q9Y6N6 1575 aa12.48□□□□□ -0.41
CRTC3-207ENST00000560047 TRAK2O60296 914 aa12.48□□□□□ -0.41
CRTC3-207ENST00000560047 CTC1Q2NKJ3 1217 aa12.48□□□□□ -0.41
CRTC3-207ENST00000560047 EMILIN1Q9Y6C2 1016 aa12.48□□□□□ -0.41
CRTC3-207ENST00000560047 MYT1Q01538 1121 aa12.47□□□□□ -0.41
CRTC3-207ENST00000560047 ALG2Q9H553 416 aa12.47□□□□□ -0.41
CRTC3-207ENST00000560047 POM121CA8CG34 1229 aa12.46□□□□□ -0.41
CRTC3-207ENST00000560047 WDR4P57081 412 aaKnown RBP12.46□□□□□ -0.41
CRTC3-207ENST00000560047 RAB15P59190 212 aa12.46□□□□□ -0.41
CRTC3-207ENST00000560047 SMCPP49901 116 aaPredicted RBP12.45□□□□□ -0.42
CRTC3-207ENST00000560047 PPP1R26Q5T8A7 1209 aaPredicted RBP12.45□□□□□ -0.42
CRTC3-207ENST00000560047 TRIM52Q96A61 297 aa12.45□□□□□ -0.42
CRTC3-207ENST00000560047 KLF16Q9BXK1 252 aaPredicted RBP12.45□□□□□ -0.42
CRTC3-207ENST00000560047 PGPEP1Q9NXJ5 209 aa12.45□□□□□ -0.42
CRTC3-207ENST00000560047 SLFNL1Q499Z3 407 aa12.44□□□□□ -0.42
CRTC3-207ENST00000560047 HDGFL1Q5TGJ6 251 aa12.44□□□□□ -0.42
CRTC3-207ENST00000560047 TRAF7Q6Q0C0 670 aa12.44□□□□□ -0.42
CRTC3-207ENST00000560047 CRIPAKQ8N1N5 446 aa12.44□□□□□ -0.42
CRTC3-207ENST00000560047 PDS5BQ9NTI5 1447 aa12.44□□□□□ -0.42
CRTC3-207ENST00000560047 ERVH48-1M5A8F1 160 aa12.43□□□□□ -0.42
CRTC3-207ENST00000560047 AXIN1O15169 862 aa12.43□□□□□ -0.42
CRTC3-207ENST00000560047 CAPN5O15484 640 aaPredicted RBP12.43□□□□□ -0.42
CRTC3-207ENST00000560047 ZIC2O95409 532 aaPredicted RBP12.43□□□□□ -0.42
CRTC3-207ENST00000560047 TIMP2P16035 220 aa12.42□□□□□ -0.42
CRTC3-207ENST00000560047 ITPKCQ96DU7 683 aa12.42□□□□□ -0.42
CRTC3-207ENST00000560047 FANCD2Q9BXW9 1451 aa12.41□□□□□ -0.42
CRTC3-207ENST00000560047 PHTF2Q8N3S3 785 aa12.41□□□□□ -0.42
CRTC3-207ENST00000560047 AAASQ9NRG9 546 aa12.41□□□□□ -0.42
CRTC3-207ENST00000560047 RNF135Q8IUD6 432 aa12.4□□□□□ -0.42
CRTC3-207ENST00000560047 ERCC6Q03468 1493 aa12.4□□□□□ -0.43
CRTC3-207ENST00000560047 ZFAND3Q9H8U3 227 aa12.39□□□□□ -0.43
CRTC3-207ENST00000560047 TMPRSS4Q9NRS4 437 aa12.39□□□□□ -0.43
CRTC3-207ENST00000560047 ZNF777Q9ULD5 760 aaPredicted RBP12.39□□□□□ -0.43
CRTC3-207ENST00000560047 ST8SIA5O15466 376 aa12.38□□□□□ -0.43
CRTC3-207ENST00000560047 ADAMTS19Q8TE59 1207 aa12.38□□□□□ -0.43
CRTC3-207ENST00000560047 GLMNQ92990 594 aa12.37□□□□□ -0.43
CRTC3-207ENST00000560047 CALR3Q96L12 384 aaKnown RBP12.37□□□□□ -0.43
CRTC3-207ENST00000560047 PCDHB11Q9Y5F2 797 aa12.37□□□□□ -0.43
CRTC3-207ENST00000560047 KIF21AQ7Z4S6 1674 aa12.36□□□□□ -0.43
CRTC3-207ENST00000560047 ZNF784Q8NCA9 323 aaPredicted RBP12.36□□□□□ -0.43
CRTC3-207ENST00000560047 CCDC85AQ96PX6 553 aaPredicted RBP12.36□□□□□ -0.43
CRTC3-207ENST00000560047 CHIC2Q9UKJ5 165 aa12.35□□□□□ -0.43
CRTC3-207ENST00000560047 CEP164Q9UPV0 1460 aa12.34□□□□□ -0.43
CRTC3-207ENST00000560047 LCE2BO14633 110 aa12.34□□□□□ -0.43
CRTC3-207ENST00000560047 MAP7D1Q3KQU3 841 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms