RNA–Protein interactions for RNA: ENST00000560029.5

CRNDE-208, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 659 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-208ENST00000560029 EMILIN1Q9Y6C2 1016 aa10.9□□□□□ -0.66
CRNDE-208ENST00000560029 GSK3AP49840 483 aa10.89□□□□□ -0.67
CRNDE-208ENST00000560029 TRMT44Q8IYL2 757 aaKnown RBP10.89□□□□□ -0.67
CRNDE-208ENST00000560029 HELBQ8NG08 1087 aaPredicted RBP10.89□□□□□ -0.67
CRNDE-208ENST00000560029 POLR3EQ9NVU0 708 aa10.89□□□□□ -0.67
CRNDE-208ENST00000560029 MAP4K5Q9Y4K4 846 aa10.89□□□□□ -0.67
CRNDE-208ENST00000560029 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.88□□□□□ -0.67
CRNDE-208ENST00000560029 ERFEQ4G0M1 354 aa10.88□□□□□ -0.67
CRNDE-208ENST00000560029 PPP1R26Q5T8A7 1209 aaPredicted RBP10.88□□□□□ -0.67
CRNDE-208ENST00000560029 CTDSPL2Q05D32 466 aa10.87□□□□□ -0.67
CRNDE-208ENST00000560029 KCNMA1Q12791 1236 aa10.86□□□□□ -0.67
CRNDE-208ENST00000560029 CLK2P49760 499 aaKnown RBP10.85□□□□□ -0.67
CRNDE-208ENST00000560029 TUSC1Q2TAM9 212 aa10.85□□□□□ -0.67
CRNDE-208ENST00000560029 COL25A1Q9BXS0 654 aaPredicted RBP10.85□□□□□ -0.67
CRNDE-208ENST00000560029 SUZ12Q15022 739 aaKnown RBP10.84□□□□□ -0.67
CRNDE-208ENST00000560029 AGBL1Q96MI9 1066 aa10.84□□□□□ -0.67
CRNDE-208ENST00000560029 RNFT1Q5M7Z0 435 aa10.83□□□□□ -0.68
CRNDE-208ENST00000560029 CCDC155Q8N6L0 562 aa10.83□□□□□ -0.68
CRNDE-208ENST00000560029 ADAMTS8Q9UP79 889 aa10.83□□□□□ -0.68
CRNDE-208ENST00000560029 LRRN4Q8WUT4 740 aa10.82□□□□□ -0.68
CRNDE-208ENST00000560029 ARHGAP9Q9BRR9 750 aa10.82□□□□□ -0.68
CRNDE-208ENST00000560029 PGPEP1Q9NXJ5 209 aa10.82□□□□□ -0.68
CRNDE-208ENST00000560029 SPINT1O43278 529 aa10.81□□□□□ -0.68
CRNDE-208ENST00000560029 Q6ZVU0 165 aa10.81□□□□□ -0.68
CRNDE-208ENST00000560029 KCTD15Q96SI1 283 aaPredicted RBP10.81□□□□□ -0.68
CRNDE-208ENST00000560029 CTSOP43234 321 aaPredicted RBP10.8□□□□□ -0.68
CRNDE-208ENST00000560029 RELBQ01201 579 aa10.8□□□□□ -0.68
CRNDE-208ENST00000560029 RASSF7Q02833 373 aa10.8□□□□□ -0.68
CRNDE-208ENST00000560029 VWA5B2Q8N398 1253 aa10.8□□□□□ -0.68
CRNDE-208ENST00000560029 TMEM151AQ8N4L1 468 aa10.8□□□□□ -0.68
CRNDE-208ENST00000560029 GDF11O95390 407 aa10.79□□□□□ -0.68
CRNDE-208ENST00000560029 FBXO31Q5XUX0 539 aaPredicted RBP10.79□□□□□ -0.68
CRNDE-208ENST00000560029 WHAMMQ8TF30 809 aa10.79□□□□□ -0.68
CRNDE-208ENST00000560029 INSM2Q96T92 566 aaPredicted RBP10.79□□□□□ -0.68
CRNDE-208ENST00000560029 CDC14CA4D256 554 aa10.78□□□□□ -0.68
CRNDE-208ENST00000560029 NR6A1Q15406 480 aa10.78□□□□□ -0.68
CRNDE-208ENST00000560029 ZNF385CQ66K41 422 aaPredicted RBP10.78□□□□□ -0.68
CRNDE-208ENST00000560029 GPKOWQ92917 476 aaPredicted RBP eCLIP10.78□□□□□ -0.68
CRNDE-208ENST00000560029 SLC10A4Q96EP9 437 aa10.78□□□□□ -0.68
CRNDE-208ENST00000560029 ZNF395Q9H8N7 513 aaPredicted RBP10.78□□□□□ -0.68
CRNDE-208ENST00000560029 PDXDC2PQ6P474 469 aa10.77□□□□□ -0.69
CRNDE-208ENST00000560029 ZBTB33Q86T24 672 aa10.77□□□□□ -0.69
CRNDE-208ENST00000560029 NANOS1Q8WY41 292 aaKnown RBP10.77□□□□□ -0.69
CRNDE-208ENST00000560029 FKBPLQ9UIM3 349 aa10.77□□□□□ -0.69
CRNDE-208ENST00000560029 SLC35F4A4IF30 521 aa10.76□□□□□ -0.69
CRNDE-208ENST00000560029 BRPF1P55201 1214 aaPredicted RBP10.76□□□□□ -0.69
CRNDE-208ENST00000560029 RAB15P59190 212 aa10.76□□□□□ -0.69
CRNDE-208ENST00000560029 NEUROD2Q15784 382 aa10.76□□□□□ -0.69
CRNDE-208ENST00000560029 SVOPQ8N4V2 548 aa10.76□□□□□ -0.69
CRNDE-208ENST00000560029 ITGA6P23229 1130 aa10.75□□□□□ -0.69
CRNDE-208ENST00000560029 INTS6LQ5JSJ4 861 aaKnown RBP10.75□□□□□ -0.69
CRNDE-208ENST00000560029 OCSTAMPQ9BR26 566 aa10.75□□□□□ -0.69
CRNDE-208ENST00000560029 POLMQ9NP87 494 aaPredicted RBP10.75□□□□□ -0.69
CRNDE-208ENST00000560029 TMPRSS4Q9NRS4 437 aa10.75□□□□□ -0.69
CRNDE-208ENST00000560029 RSPH6AQ9H0K4 717 aa10.74□□□□□ -0.69
CRNDE-208ENST00000560029 PROCA1Q8NCQ7 364 aaPredicted RBP10.73□□□□□ -0.69
CRNDE-208ENST00000560029 SV2AQ7L0J3 742 aa10.72□□□□□ -0.69
CRNDE-208ENST00000560029 ATP1B4Q9UN42 357 aaPredicted RBP10.72□□□□□ -0.69
CRNDE-208ENST00000560029 DHX9Q08211 1270 aaKnown RBP10.71□□□□□ -0.69
CRNDE-208ENST00000560029 EPS8L1Q8TE68 723 aa10.71□□□□□ -0.69
CRNDE-208ENST00000560029 IRS1P35568 1242 aa10.7□□□□□ -0.7
CRNDE-208ENST00000560029 ADAM32Q8TC27 787 aa10.7□□□□□ -0.7
CRNDE-208ENST00000560029 RNF217Q8TC41 542 aa10.7□□□□□ -0.7
CRNDE-208ENST00000560029 SENP3-EIF4A1A0A087X0R7 540 aa10.69□□□□□ -0.7
CRNDE-208ENST00000560029 CDV3Q9UKY7 258 aaKnown RBP10.69□□□□□ -0.7
CRNDE-208ENST00000560029 RNF225M0QZC1 329 aaPredicted RBP10.68□□□□□ -0.7
CRNDE-208ENST00000560029 ARHGEF15O94989 841 aa10.68□□□□□ -0.7
CRNDE-208ENST00000560029 SLURP2P0DP57 97 aa10.68□□□□□ -0.7
CRNDE-208ENST00000560029 ADD1P35611 737 aaKnown RBP10.68□□□□□ -0.7
CRNDE-208ENST00000560029 PTK2Q05397 1052 aa10.68□□□□□ -0.7
CRNDE-208ENST00000560029 ZNF784Q8NCA9 323 aaPredicted RBP10.68□□□□□ -0.7
CRNDE-208ENST00000560029 GPBP1L1Q9HC44 474 aaPredicted RBP10.68□□□□□ -0.7
CRNDE-208ENST00000560029 AP1G2O75843 785 aa10.67□□□□□ -0.7
CRNDE-208ENST00000560029 GPAT2Q6NUI2 795 aa10.66□□□□□ -0.7
CRNDE-208ENST00000560029 CUEDC1Q9NWM3 386 aaPredicted RBP10.66□□□□□ -0.7
CRNDE-208ENST00000560029 MARSP56192 900 aaKnown RBP10.65□□□□□ -0.7
CRNDE-208ENST00000560029 FOXD4L5Q5VV16 416 aaPredicted RBP10.65□□□□□ -0.7
CRNDE-208ENST00000560029 KDF1Q8NAX2 398 aaPredicted RBP10.65□□□□□ -0.7
CRNDE-208ENST00000560029 ERVH48-1M5A8F1 160 aa10.64□□□□□ -0.71
CRNDE-208ENST00000560029 ADAMTS2O95450 1211 aa10.64□□□□□ -0.71
CRNDE-208ENST00000560029 SKIV2LQ15477 1246 aaKnown RBP10.64□□□□□ -0.71
CRNDE-208ENST00000560029 LYPD4Q6UWN0 246 aa10.64□□□□□ -0.71
CRNDE-208ENST00000560029 LILRA1O75019 489 aa10.63□□□□□ -0.71
CRNDE-208ENST00000560029 ADH1AP07327 375 aa10.63□□□□□ -0.71
CRNDE-208ENST00000560029 KDM4CQ9H3R0 1056 aa10.63□□□□□ -0.71
CRNDE-208ENST00000560029 HMX1Q9NP08 348 aaPredicted RBP10.63□□□□□ -0.71
CRNDE-208ENST00000560029 ZC3H4Q9UPT8 1303 aaKnown RBP10.62□□□□□ -0.71
CRNDE-208ENST00000560029 PTGIRP43119 386 aa10.62□□□□□ -0.71
CRNDE-208ENST00000560029 DZIP3Q86Y13 1208 aaKnown RBP10.62□□□□□ -0.71
CRNDE-208ENST00000560029 RHOQP17081 205 aa10.61□□□□□ -0.71
CRNDE-208ENST00000560029 NBPF20Q3BBV1 942 aa10.61□□□□□ -0.71
CRNDE-208ENST00000560029 PRICKLE2Q7Z3G6 844 aa10.61□□□□□ -0.71
CRNDE-208ENST00000560029 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.61□□□□□ -0.71
CRNDE-208ENST00000560029 GAS6Q14393 721 aa10.6□□□□□ -0.71
CRNDE-208ENST00000560029 FAM117AQ9C073 453 aa10.6□□□□□ -0.71
CRNDE-208ENST00000560029 CYLDQ9NQC7 956 aa10.6□□□□□ -0.71
CRNDE-208ENST00000560029 GPSM3Q9Y4H4 160 aa10.6□□□□□ -0.71
CRNDE-208ENST00000560029 PPP2R2DQ66LE6 453 aa10.59□□□□□ -0.71
CRNDE-208ENST00000560029 LYSMD3Q7Z3D4 306 aa10.59□□□□□ -0.71
CRNDE-208ENST00000560029 SH3D19Q5HYK7 790 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms