RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 CABP2Q9NPB3 220 aa29.44■■■□□ 2.3
PSEN1-225ENST00000560005 KIAA1210Q9ULL0 1709 aa29.44■■■□□ 2.3
PSEN1-225ENST00000560005 NLRP6P59044 892 aa29.43■■■□□ 2.3
PSEN1-225ENST00000560005 BRD4O60885 1362 aaPredicted RBP29.42■■■□□ 2.3
PSEN1-225ENST00000560005 SLIT3O75094 1523 aa29.42■■■□□ 2.3
PSEN1-225ENST00000560005 NBPF1Q3BBV0 1214 aa29.42■■■□□ 2.3
PSEN1-225ENST00000560005 PROM2Q8N271 834 aa29.42■■■□□ 2.3
PSEN1-225ENST00000560005 MYOM1P52179 1685 aa29.4■■■□□ 2.3
PSEN1-225ENST00000560005 USP6P35125 1406 aa29.4■■■□□ 2.3
PSEN1-225ENST00000560005 MARCH10Q8NA82 808 aaPredicted RBP29.4■■■□□ 2.3
PSEN1-225ENST00000560005 WNK3Q9BYP7 1800 aa29.39■■■□□ 2.3
PSEN1-225ENST00000560005 PTGER2P43116 358 aa29.38■■■□□ 2.29
PSEN1-225ENST00000560005 COL18A1P39060 1754 aa29.38■■■□□ 2.29
PSEN1-225ENST00000560005 WDR17Q8IZU2 1322 aa29.38■■■□□ 2.29
PSEN1-225ENST00000560005 CENPJQ9HC77 1338 aaPredicted RBP29.38■■■□□ 2.29
PSEN1-225ENST00000560005 CABP1Q9NZU7 370 aa29.37■■■□□ 2.29
PSEN1-225ENST00000560005 ATF5Q9Y2D1 282 aaPredicted RBP29.37■■■□□ 2.29
PSEN1-225ENST00000560005 AXIN2Q9Y2T1 843 aa29.37■■■□□ 2.29
PSEN1-225ENST00000560005 AKAP12Q02952 1782 aa29.36■■■□□ 2.29
PSEN1-225ENST00000560005 BCL9O00512 1426 aa29.36■■■□□ 2.29
PSEN1-225ENST00000560005 ZNF784Q8NCA9 323 aaPredicted RBP29.35■■■□□ 2.29
PSEN1-225ENST00000560005 CDCA7Q9BWT1 371 aaPredicted RBP29.34■■■□□ 2.29
PSEN1-225ENST00000560005 STK32BQ9NY57 414 aa29.34■■■□□ 2.29
PSEN1-225ENST00000560005 PIK3C2AO00443 1686 aa29.34■■■□□ 2.29
PSEN1-225ENST00000560005 TXNRD1Q16881 649 aa29.33■■■□□ 2.29
PSEN1-225ENST00000560005 CPSF1Q10570 1443 aaKnown RBP29.32■■■□□ 2.28
PSEN1-225ENST00000560005 QRICH2Q9H0J4 1663 aa29.31■■■□□ 2.28
PSEN1-225ENST00000560005 SLC15A2Q16348 729 aa29.3■■■□□ 2.28
PSEN1-225ENST00000560005 FHDC1Q9C0D6 1143 aaPredicted RBP29.3■■■□□ 2.28
PSEN1-225ENST00000560005 SYT17Q9BSW7 474 aa29.29■■■□□ 2.28
PSEN1-225ENST00000560005 CSB-PGBD3P0DP91 1061 aa29.28■■■□□ 2.28
PSEN1-225ENST00000560005 SOX12O15370 315 aa29.27■■■□□ 2.28
PSEN1-225ENST00000560005 ARHGEF25Q86VW2 580 aa29.27■■■□□ 2.28
PSEN1-225ENST00000560005 CARD10Q9BWT7 1032 aa29.27■■■□□ 2.28
PSEN1-225ENST00000560005 RGPD5Q99666 1765 aa29.26■■■□□ 2.28
PSEN1-225ENST00000560005 MTFR1LQ9H019 292 aa29.26■■■□□ 2.27
PSEN1-225ENST00000560005 EXOC5O00471 708 aa29.24■■■□□ 2.27
PSEN1-225ENST00000560005 KCNH5Q8NCM2 988 aa29.24■■■□□ 2.27
PSEN1-225ENST00000560005 SGIP1Q9BQI5 828 aa29.23■■■□□ 2.27
PSEN1-225ENST00000560005 TTC21BQ7Z4L5 1316 aa29.21■■■□□ 2.27
PSEN1-225ENST00000560005 TNS2Q63HR2 1409 aa29.2■■■□□ 2.26
PSEN1-225ENST00000560005 CCDC7Q96M83 1385 aa29.19■■■□□ 2.26
PSEN1-225ENST00000560005 CHD4Q14839 1912 aa29.19■■■□□ 2.26
PSEN1-225ENST00000560005 EVC2Q86UK5 1308 aa29.19■■■□□ 2.26
PSEN1-225ENST00000560005 NHSQ6T4R5 1651 aa29.18■■■□□ 2.26
PSEN1-225ENST00000560005 TRPM1Q7Z4N2 1603 aa29.17■■■□□ 2.26
PSEN1-225ENST00000560005 SENP3-EIF4A1A0A087X0R7 540 aa29.17■■■□□ 2.26
PSEN1-225ENST00000560005 ACSBG1Q96GR2 724 aa29.17■■■□□ 2.26
PSEN1-225ENST00000560005 ARXQ96QS3 562 aa29.17■■■□□ 2.26
PSEN1-225ENST00000560005 NFAT5O94916 1531 aa29.16■■■□□ 2.26
PSEN1-225ENST00000560005 ZNF692Q9BU19 519 aaPredicted RBP29.16■■■□□ 2.26
PSEN1-225ENST00000560005 TTC21AQ8NDW8 1320 aa29.14■■■□□ 2.25
PSEN1-225ENST00000560005 PAPPAQ13219 1627 aa29.13■■■□□ 2.25
PSEN1-225ENST00000560005 C1QTNF8P60827 252 aa29.13■■■□□ 2.25
PSEN1-225ENST00000560005 ABCC6O95255 1503 aa29.11■■■□□ 2.25
PSEN1-225ENST00000560005 MAP3K5Q99683 1374 aa29.1■■■□□ 2.25
PSEN1-225ENST00000560005 GOLGB1Q14789 3259 aaKnown RBP29.08■■■□□ 2.25
PSEN1-225ENST00000560005 ZNF827Q17R98 1081 aa29.08■■■□□ 2.25
PSEN1-225ENST00000560005 KTN1Q86UP2 1357 aaKnown RBP29.07■■■□□ 2.24
PSEN1-225ENST00000560005 NLRP2Q9NX02 1062 aa29.07■■■□□ 2.24
PSEN1-225ENST00000560005 BTAF1O14981 1849 aa29.06■■■□□ 2.24
PSEN1-225ENST00000560005 ERBB3P21860 1342 aa29.05■■■□□ 2.24
PSEN1-225ENST00000560005 GPR162Q16538 588 aa29.05■■■□□ 2.24
PSEN1-225ENST00000560005 IL2RBP14784 551 aa29.04■■■□□ 2.24
PSEN1-225ENST00000560005 LRRC4BQ9NT99 713 aa29.04■■■□□ 2.24
PSEN1-225ENST00000560005 TIMELESSQ9UNS1 1208 aa29.03■■■□□ 2.24
PSEN1-225ENST00000560005 L3MBTL2Q969R5 705 aa29.02■■■□□ 2.24
PSEN1-225ENST00000560005 KAT6BQ8WYB5 2073 aa29.01■■■□□ 2.24
PSEN1-225ENST00000560005 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.01■■■□□ 2.23
PSEN1-225ENST00000560005 KLHL34Q8N239 644 aa29.01■■■□□ 2.23
PSEN1-225ENST00000560005 MON2Q7Z3U7 1717 aa29■■■□□ 2.23
PSEN1-225ENST00000560005 USP31Q70CQ4 1352 aa28.99■■■□□ 2.23
PSEN1-225ENST00000560005 AKT1S1Q96B36 256 aa28.98■■■□□ 2.23
PSEN1-225ENST00000560005 ANKRD24Q8TF21 1146 aa28.97■■■□□ 2.23
PSEN1-225ENST00000560005 LTN1O94822 1766 aa28.97■■■□□ 2.23
PSEN1-225ENST00000560005 ROCK2O75116 1388 aaKnown RBP28.97■■■□□ 2.23
PSEN1-225ENST00000560005 NME9Q86XW9 330 aa28.96■■■□□ 2.23
PSEN1-225ENST00000560005 PELP1Q8IZL8 1130 aaKnown RBP28.96■■■□□ 2.23
PSEN1-225ENST00000560005 GIGYF1O75420 1035 aaPredicted RBP28.95■■■□□ 2.22
PSEN1-225ENST00000560005 POLD1P28340 1107 aa28.95■■■□□ 2.22
PSEN1-225ENST00000560005 SLC16A10Q8TF71 515 aa28.95■■■□□ 2.22
PSEN1-225ENST00000560005 USP54Q70EL1 1684 aa28.95■■■□□ 2.22
PSEN1-225ENST00000560005 CEP350Q5VT06 3117 aa28.93■■■□□ 2.22
PSEN1-225ENST00000560005 QSER1Q2KHR3 1735 aa28.93■■■□□ 2.22
PSEN1-225ENST00000560005 PNPLA7Q6ZV29 1317 aa28.93■■■□□ 2.22
PSEN1-225ENST00000560005 SLC27A3Q5K4L6 730 aa28.92■■■□□ 2.22
PSEN1-225ENST00000560005 SBNO2Q9Y2G9 1366 aa28.91■■■□□ 2.22
PSEN1-225ENST00000560005 COL24A1Q17RW2 1714 aa28.9■■■□□ 2.22
PSEN1-225ENST00000560005 DDX54Q8TDD1 881 aaKnown RBP28.9■■■□□ 2.22
PSEN1-225ENST00000560005 CD163L1Q9NR16 1453 aa28.9■■■□□ 2.22
PSEN1-225ENST00000560005 NLGN2Q8NFZ4 835 aa28.89■■■□□ 2.22
PSEN1-225ENST00000560005 TFCP2L1Q9NZI6 479 aa28.89■■■□□ 2.22
PSEN1-225ENST00000560005 KCNQ4P56696 695 aa28.88■■■□□ 2.21
PSEN1-225ENST00000560005 TUBGCP6Q96RT7 1819 aa28.87■■■□□ 2.21
PSEN1-225ENST00000560005 SHANK3Q9BYB0 1731 aa28.86■■■□□ 2.21
PSEN1-225ENST00000560005 TMC1Q8TDI8 760 aa28.85■■■□□ 2.21
PSEN1-225ENST00000560005 SYTL4Q96C24 671 aaPredicted RBP28.85■■■□□ 2.21
PSEN1-225ENST00000560005 SIN3AQ96ST3 1273 aa28.84■■■□□ 2.21
PSEN1-225ENST00000560005 NEUROD1Q13562 356 aa28.83■■■□□ 2.21
PSEN1-225ENST00000560005 LTV1Q96GA3 475 aaPredicted RBP28.83■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms