RNA–Protein interactions for RNA: ENST00000560003.1

SEMA4B-214, Transcript of semaphorin 4B, humanhuman

TSL 3

Gene SEMA4B, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-214ENST00000560003 ZRANB1Q9UGI0 708 aa12.42□□□□□ -0.42
SEMA4B-214ENST00000560003 C11orf95C9JLR9 678 aaPredicted RBP12.41□□□□□ -0.42
SEMA4B-214ENST00000560003 RGS12O14924 1447 aa12.41□□□□□ -0.42
SEMA4B-214ENST00000560003 LARP1Q6PKG0 1096 aaKnown RBP12.41□□□□□ -0.42
SEMA4B-214ENST00000560003 UPF1Q92900 1129 aaKnown RBP eCLIP12.41□□□□□ -0.42
SEMA4B-214ENST00000560003 USP35Q9P2H5 1018 aa12.41□□□□□ -0.42
SEMA4B-214ENST00000560003 MARF1Q9Y4F3 1742 aaKnown RBP12.41□□□□□ -0.42
SEMA4B-214ENST00000560003 SLIT3O75094 1523 aa12.41□□□□□ -0.42
SEMA4B-214ENST00000560003 NWD2Q9ULI1 1742 aa12.4□□□□□ -0.42
SEMA4B-214ENST00000560003 AMPHP49418 695 aa12.4□□□□□ -0.42
SEMA4B-214ENST00000560003 PDE3BQ13370 1112 aa12.4□□□□□ -0.42
SEMA4B-214ENST00000560003 CARD14Q9BXL6 1004 aa12.4□□□□□ -0.42
SEMA4B-214ENST00000560003 PANK3Q9H999 370 aa12.4□□□□□ -0.42
SEMA4B-214ENST00000560003 WDR17Q8IZU2 1322 aa12.39□□□□□ -0.43
SEMA4B-214ENST00000560003 MYCNP04198 464 aaPredicted RBP12.39□□□□□ -0.43
SEMA4B-214ENST00000560003 SF3B2Q13435 895 aaKnown RBP12.39□□□□□ -0.43
SEMA4B-214ENST00000560003 IP6K1Q92551 441 aa12.39□□□□□ -0.43
SEMA4B-214ENST00000560003 CARD10Q9BWT7 1032 aa12.39□□□□□ -0.43
SEMA4B-214ENST00000560003 GGNBP2Q9H3C7 697 aa12.39□□□□□ -0.43
SEMA4B-214ENST00000560003 AXIN2Q9Y2T1 843 aa12.39□□□□□ -0.43
SEMA4B-214ENST00000560003 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.39□□□□□ -0.43
SEMA4B-214ENST00000560003 KNSTRNQ9Y448 316 aa12.38□□□□□ -0.43
SEMA4B-214ENST00000560003 AKAP12Q02952 1782 aa12.38□□□□□ -0.43
SEMA4B-214ENST00000560003 CRB1P82279 1406 aa12.37□□□□□ -0.43
SEMA4B-214ENST00000560003 NRKQ7Z2Y5 1582 aa12.37□□□□□ -0.43
SEMA4B-214ENST00000560003 CAMTA1Q9Y6Y1 1673 aa12.37□□□□□ -0.43
SEMA4B-214ENST00000560003 ABCA3Q99758 1704 aa12.37□□□□□ -0.43
SEMA4B-214ENST00000560003 PHRF1Q9P1Y6 1649 aaKnown RBP12.37□□□□□ -0.43
SEMA4B-214ENST00000560003 PIK3C2AO00443 1686 aa12.36□□□□□ -0.43
SEMA4B-214ENST00000560003 COL5A2P05997 1499 aaPredicted RBP12.36□□□□□ -0.43
SEMA4B-214ENST00000560003 ZEB1P37275 1124 aaPredicted RBP12.36□□□□□ -0.43
SEMA4B-214ENST00000560003 FAM196AQ6ZSG2 479 aa12.36□□□□□ -0.43
SEMA4B-214ENST00000560003 ANKRD24Q8TF21 1146 aa12.36□□□□□ -0.43
SEMA4B-214ENST00000560003 NLRP2Q9NX02 1062 aa12.36□□□□□ -0.43
SEMA4B-214ENST00000560003 OVOS2A0A0J9YW53 1432 aa12.36□□□□□ -0.43
SEMA4B-214ENST00000560003 OVOS2Q6IE36 1432 aa12.36□□□□□ -0.43
SEMA4B-214ENST00000560003 NSD3Q9BZ95 1437 aa12.36□□□□□ -0.43
SEMA4B-214ENST00000560003 MON2Q7Z3U7 1717 aa12.35□□□□□ -0.43
SEMA4B-214ENST00000560003 FKBP8Q14318 412 aa12.35□□□□□ -0.43
SEMA4B-214ENST00000560003 PLCH1Q4KWH8 1693 aa12.35□□□□□ -0.43
SEMA4B-214ENST00000560003 KIF7Q2M1P5 1343 aa12.35□□□□□ -0.43
SEMA4B-214ENST00000560003 CRYBG1Q9Y4K1 1723 aa12.34□□□□□ -0.43
SEMA4B-214ENST00000560003 KIF24Q5T7B8 1368 aa12.34□□□□□ -0.43
SEMA4B-214ENST00000560003 CCDC7Q96M83 1385 aa12.34□□□□□ -0.43
SEMA4B-214ENST00000560003 ABCC6O95255 1503 aa12.34□□□□□ -0.43
SEMA4B-214ENST00000560003 EXOC5O00471 708 aa12.34□□□□□ -0.43
SEMA4B-214ENST00000560003 DDB1Q16531 1140 aa12.34□□□□□ -0.43
SEMA4B-214ENST00000560003 BLMP54132 1417 aaPredicted RBP12.34□□□□□ -0.43
SEMA4B-214ENST00000560003 GLI3P10071 1580 aa12.34□□□□□ -0.43
SEMA4B-214ENST00000560003 ERBB3P21860 1342 aa12.34□□□□□ -0.43
SEMA4B-214ENST00000560003 MAP3K19Q56UN5 1328 aa12.34□□□□□ -0.43
SEMA4B-214ENST00000560003 NSD2O96028 1365 aa12.33□□□□□ -0.44
SEMA4B-214ENST00000560003 HOXC9P31274 260 aa12.33□□□□□ -0.44
SEMA4B-214ENST00000560003 NFAT5O94916 1531 aa12.32□□□□□ -0.44
SEMA4B-214ENST00000560003 RTL1A6NKG5 1358 aa12.32□□□□□ -0.44
SEMA4B-214ENST00000560003 RRS1Q15050 365 aaKnown RBP12.32□□□□□ -0.44
SEMA4B-214ENST00000560003 MORC1Q86VD1 984 aa12.32□□□□□ -0.44
SEMA4B-214ENST00000560003 LTV1Q96GA3 475 aaPredicted RBP12.32□□□□□ -0.44
SEMA4B-214ENST00000560003 PPM1GO15355 546 aaPredicted RBP12.31□□□□□ -0.44
SEMA4B-214ENST00000560003 IL2RBP14784 551 aa12.31□□□□□ -0.44
SEMA4B-214ENST00000560003 SMG6Q86US8 1419 aaKnown RBP12.3□□□□□ -0.44
SEMA4B-214ENST00000560003 LMO7Q8WWI1 1683 aa12.3□□□□□ -0.44
SEMA4B-214ENST00000560003 NRAPQ86VF7 1730 aa12.3□□□□□ -0.44
SEMA4B-214ENST00000560003 FBLN1P23142 703 aa12.29□□□□□ -0.44
SEMA4B-214ENST00000560003 BAG6P46379 1132 aa12.29□□□□□ -0.44
SEMA4B-214ENST00000560003 INSRP06213 1382 aa12.29□□□□□ -0.44
SEMA4B-214ENST00000560003 FLT4P35916 1363 aa12.29□□□□□ -0.44
SEMA4B-214ENST00000560003 HSP90AB2PQ58FF8 381 aa12.28□□□□□ -0.44
SEMA4B-214ENST00000560003 WASHC2AQ641Q2 1341 aa12.28□□□□□ -0.44
SEMA4B-214ENST00000560003 USP54Q70EL1 1684 aa12.28□□□□□ -0.44
SEMA4B-214ENST00000560003 TNNT2P45379 298 aaPredicted RBP12.27□□□□□ -0.45
SEMA4B-214ENST00000560003 RAPGEF4Q8WZA2 1011 aa12.27□□□□□ -0.45
SEMA4B-214ENST00000560003 POLKQ9UBT6 870 aa12.27□□□□□ -0.45
SEMA4B-214ENST00000560003 PER1O15534 1290 aaPredicted RBP12.26□□□□□ -0.45
SEMA4B-214ENST00000560003 TRIM37O94972 964 aa12.25□□□□□ -0.45
SEMA4B-214ENST00000560003 FAM182BQ5T319 152 aa12.25□□□□□ -0.45
SEMA4B-214ENST00000560003 EMILIN1Q9Y6C2 1016 aa12.25□□□□□ -0.45
SEMA4B-214ENST00000560003 COL18A1P39060 1754 aa12.25□□□□□ -0.45
SEMA4B-214ENST00000560003 APBA3O96018 575 aa12.24□□□□□ -0.45
SEMA4B-214ENST00000560003 TATP17735 454 aaPredicted RBP12.24□□□□□ -0.45
SEMA4B-214ENST00000560003 NBPF6Q5VWK0 638 aa12.24□□□□□ -0.45
SEMA4B-214ENST00000560003 ZCRB1Q8TBF4 217 aaKnown RBP12.24□□□□□ -0.45
SEMA4B-214ENST00000560003 NBPF4Q96M43 638 aa12.24□□□□□ -0.45
SEMA4B-214ENST00000560003 OVOS2A0A0G2JMS6 1433 aa12.23□□□□□ -0.45
SEMA4B-214ENST00000560003 NPC1L1Q9UHC9 1359 aa12.23□□□□□ -0.45
SEMA4B-214ENST00000560003 MARCH10Q8NA82 808 aaPredicted RBP12.23□□□□□ -0.45
SEMA4B-214ENST00000560003 BCL11BQ9C0K0 894 aaPredicted RBP12.23□□□□□ -0.45
SEMA4B-214ENST00000560003 EP400Q96L91 3159 aa12.23□□□□□ -0.45
SEMA4B-214ENST00000560003 THSD7AQ9UPZ6 1657 aa12.22□□□□□ -0.45
SEMA4B-214ENST00000560003 CC2D1BQ5T0F9 858 aaKnown RBP12.22□□□□□ -0.45
SEMA4B-214ENST00000560003 DDX54Q8TDD1 881 aaKnown RBP12.22□□□□□ -0.45
SEMA4B-214ENST00000560003 MYOM1P52179 1685 aa12.22□□□□□ -0.45
SEMA4B-214ENST00000560003 DISP2A7MBM2 1401 aa12.21□□□□□ -0.45
SEMA4B-214ENST00000560003 BCL9O00512 1426 aa12.21□□□□□ -0.45
SEMA4B-214ENST00000560003 HMGB2P26583 209 aaKnown RBP12.21□□□□□ -0.45
SEMA4B-214ENST00000560003 SPG7Q9UQ90 795 aa12.21□□□□□ -0.45
SEMA4B-214ENST00000560003 PARD3Q8TEW0 1356 aa12.2□□□□□ -0.46
SEMA4B-214ENST00000560003 DEFB132Q7Z7B7 95 aa12.2□□□□□ -0.46
SEMA4B-214ENST00000560003 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.2□□□□□ -0.46
SEMA4B-214ENST00000560003 PLSCR1O15162 318 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms