RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 OSBPP22059 807 aa7.51□□□□□ -1.21
SPG11-220ENST00000559933 NBPF8Q3BBV2 869 aa7.51□□□□□ -1.21
SPG11-220ENST00000559933 THSD4Q6ZMP0 1018 aa7.51□□□□□ -1.21
SPG11-220ENST00000559933 DCAF11Q8TEB1 546 aa7.51□□□□□ -1.21
SPG11-220ENST00000559933 PLA2G2EQ9NZK7 142 aa7.5□□□□□ -1.21
SPG11-220ENST00000559933 ADGRF5Q8IZF2 1346 aa7.5□□□□□ -1.21
SPG11-220ENST00000559933 NLRP1Q9C000 1473 aa7.49□□□□□ -1.21
SPG11-220ENST00000559933 DISP3Q9P2K9 1392 aa7.49□□□□□ -1.21
SPG11-220ENST00000559933 PRSS12P56730 875 aa7.49□□□□□ -1.21
SPG11-220ENST00000559933 CDCA7LQ96GN5 454 aa7.49□□□□□ -1.21
SPG11-220ENST00000559933 SEPT9Q9UHD8 586 aaPredicted RBP7.49□□□□□ -1.21
SPG11-220ENST00000559933 PRAG1Q86YV5 1406 aa7.49□□□□□ -1.21
SPG11-220ENST00000559933 RIMS2Q9UQ26 1411 aa7.49□□□□□ -1.21
SPG11-220ENST00000559933 NEURL4Q96JN8 1562 aa7.49□□□□□ -1.21
SPG11-220ENST00000559933 IQGAP1P46940 1657 aa7.48□□□□□ -1.21
SPG11-220ENST00000559933 PPP1R15AO75807 674 aaPredicted RBP7.48□□□□□ -1.21
SPG11-220ENST00000559933 ZFYVE9O95405 1425 aa7.48□□□□□ -1.21
SPG11-220ENST00000559933 FAM98CQ17RN3 349 aaKnown RBP7.48□□□□□ -1.21
SPG11-220ENST00000559933 ZFRQ96KR1 1074 aaKnown RBP7.48□□□□□ -1.21
SPG11-220ENST00000559933 SLC52A1Q9NWF4 448 aa7.48□□□□□ -1.21
SPG11-220ENST00000559933 TRPM1Q7Z4N2 1603 aa7.48□□□□□ -1.21
SPG11-220ENST00000559933 MYOM2P54296 1465 aa7.48□□□□□ -1.21
SPG11-220ENST00000559933 UHRF1BP1Q6BDS2 1440 aa7.47□□□□□ -1.21
SPG11-220ENST00000559933 NBPF26B4DH59 902 aa7.47□□□□□ -1.21
SPG11-220ENST00000559933 ZEB1P37275 1124 aaPredicted RBP7.47□□□□□ -1.21
SPG11-220ENST00000559933 NRXN3Q9Y4C0 1643 aa7.47□□□□□ -1.21
SPG11-220ENST00000559933 NRXN1Q9ULB1 1477 aa7.47□□□□□ -1.21
SPG11-220ENST00000559933 KDM5AP29375 1690 aaKnown RBP7.47□□□□□ -1.21
SPG11-220ENST00000559933 ASXL1Q8IXJ9 1541 aa7.47□□□□□ -1.21
SPG11-220ENST00000559933 MLLT3P42568 568 aaPredicted RBP7.46□□□□□ -1.22
SPG11-220ENST00000559933 PRIM1P49642 420 aaKnown RBP7.46□□□□□ -1.22
SPG11-220ENST00000559933 HDGFP51858 240 aaKnown RBP7.46□□□□□ -1.22
SPG11-220ENST00000559933 LRCH3Q96II8 777 aa7.46□□□□□ -1.22
SPG11-220ENST00000559933 TSKSQ9UJT2 592 aa7.46□□□□□ -1.22
SPG11-220ENST00000559933 TMEM2Q9UHN6 1383 aa7.46□□□□□ -1.22
SPG11-220ENST00000559933 PIK3C2GO75747 1445 aa7.45□□□□□ -1.22
SPG11-220ENST00000559933 RALGAPBQ86X10 1494 aa7.45□□□□□ -1.22
SPG11-220ENST00000559933 ARHGAP23Q9P227 1491 aa7.45□□□□□ -1.22
SPG11-220ENST00000559933 SETD1AO15047 1707 aaKnown RBP7.45□□□□□ -1.22
SPG11-220ENST00000559933 LTKP29376 864 aa7.45□□□□□ -1.22
SPG11-220ENST00000559933 HSPA2P54652 639 aa7.45□□□□□ -1.22
SPG11-220ENST00000559933 NBPF1Q3BBV0 1214 aa7.45□□□□□ -1.22
SPG11-220ENST00000559933 SMYD5Q6GMV2 418 aa7.45□□□□□ -1.22
SPG11-220ENST00000559933 HIRIP3Q9BW71 556 aaPredicted RBP7.45□□□□□ -1.22
SPG11-220ENST00000559933 CDHR5Q9HBB8 845 aa7.45□□□□□ -1.22
SPG11-220ENST00000559933 RBM27Q9P2N5 1060 aaKnown RBP7.45□□□□□ -1.22
SPG11-220ENST00000559933 SLIT1O75093 1534 aa7.45□□□□□ -1.22
SPG11-220ENST00000559933 SOWAHBA6NEL2 793 aa7.44□□□□□ -1.22
SPG11-220ENST00000559933 BCAMP50895 628 aa7.44□□□□□ -1.22
SPG11-220ENST00000559933 CFAP70Q5T0N1 1121 aa7.44□□□□□ -1.22
SPG11-220ENST00000559933 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.44□□□□□ -1.22
SPG11-220ENST00000559933 PNMA3Q9UL41 463 aa7.44□□□□□ -1.22
SPG11-220ENST00000559933 ADGRB1O14514 1584 aa7.43□□□□□ -1.22
SPG11-220ENST00000559933 NUTM2FA1L443 756 aa7.43□□□□□ -1.22
SPG11-220ENST00000559933 NYAP1Q6ZVC0 841 aa7.43□□□□□ -1.22
SPG11-220ENST00000559933 TATDN2Q93075 761 aa7.43□□□□□ -1.22
SPG11-220ENST00000559933 TIMELESSQ9UNS1 1208 aa7.43□□□□□ -1.22
SPG11-220ENST00000559933 POLR1AO95602 1720 aaPredicted RBP7.43□□□□□ -1.22
SPG11-220ENST00000559933 ROCK2O75116 1388 aaKnown RBP7.43□□□□□ -1.22
SPG11-220ENST00000559933 SCAF11Q99590 1463 aaKnown RBP7.43□□□□□ -1.22
SPG11-220ENST00000559933 ALKQ9UM73 1620 aa7.42□□□□□ -1.22
SPG11-220ENST00000559933 SMAPO00193 183 aa7.42□□□□□ -1.22
SPG11-220ENST00000559933 SEMA3EO15041 775 aa7.42□□□□□ -1.22
SPG11-220ENST00000559933 TMEM132EQ6IEE7 984 aa7.42□□□□□ -1.22
SPG11-220ENST00000559933 RPGRIP1LQ68CZ1 1315 aa7.42□□□□□ -1.22
SPG11-220ENST00000559933 ADAMTS13Q76LX8 1427 aa7.42□□□□□ -1.22
SPG11-220ENST00000559933 SETBP1Q9Y6X0 1596 aa7.42□□□□□ -1.22
SPG11-220ENST00000559933 SETD1BQ9UPS6 1966 aaKnown RBP7.41□□□□□ -1.22
SPG11-220ENST00000559933 SLC4A3P48751 1232 aa7.41□□□□□ -1.22
SPG11-220ENST00000559933 PADI6Q6TGC4 694 aa7.41□□□□□ -1.22
SPG11-220ENST00000559933 NUDT18Q6ZVK8 323 aa7.41□□□□□ -1.22
SPG11-220ENST00000559933 TXNDC2Q86VQ3 553 aa7.41□□□□□ -1.22
SPG11-220ENST00000559933 SLC26A8Q96RN1 970 aa7.41□□□□□ -1.22
SPG11-220ENST00000559933 TSR3Q9UJK0 312 aaKnown RBP7.41□□□□□ -1.22
SPG11-220ENST00000559933 HPS5Q9UPZ3 1129 aa7.41□□□□□ -1.22
SPG11-220ENST00000559933 METP08581 1390 aa7.41□□□□□ -1.22
SPG11-220ENST00000559933 LAMC1P11047 1609 aa7.41□□□□□ -1.22
SPG11-220ENST00000559933 KIAA1210Q9ULL0 1709 aa7.41□□□□□ -1.22
SPG11-220ENST00000559933 STRCQ7RTU9 1775 aa7.41□□□□□ -1.22
SPG11-220ENST00000559933 HSPA5P11021 654 aaKnown RBP7.4□□□□□ -1.22
SPG11-220ENST00000559933 VSIG10Q8N0Z9 540 aa7.4□□□□□ -1.22
SPG11-220ENST00000559933 THEMISQ8N1K5 641 aaPredicted RBP7.4□□□□□ -1.22
SPG11-220ENST00000559933 BCANQ96GW7 911 aa7.4□□□□□ -1.22
SPG11-220ENST00000559933 CARD11Q9BXL7 1154 aa7.4□□□□□ -1.22
SPG11-220ENST00000559933 PLEKHG1Q9ULL1 1385 aa7.4□□□□□ -1.22
SPG11-220ENST00000559933 ARHGEF28Q8N1W1 1705 aaKnown RBP7.39□□□□□ -1.23
SPG11-220ENST00000559933 NPHP4O75161 1426 aaPredicted RBP7.39□□□□□ -1.23
SPG11-220ENST00000559933 PTPRUQ92729 1446 aa7.39□□□□□ -1.23
SPG11-220ENST00000559933 GPRASP1Q5JY77 1395 aa7.39□□□□□ -1.23
SPG11-220ENST00000559933 USP47Q96K76 1375 aa7.39□□□□□ -1.23
SPG11-220ENST00000559933 RNF40O75150 1001 aa7.39□□□□□ -1.23
SPG11-220ENST00000559933 PPP4CP60510 307 aa7.39□□□□□ -1.23
SPG11-220ENST00000559933 NPDC1Q9NQX5 325 aaPredicted RBP7.39□□□□□ -1.23
SPG11-220ENST00000559933 STK26Q9P289 416 aa7.39□□□□□ -1.23
SPG11-220ENST00000559933 FAM198AQ9UFP1 575 aa7.39□□□□□ -1.23
SPG11-220ENST00000559933 MED14O60244 1454 aa7.38□□□□□ -1.23
SPG11-220ENST00000559933 FCHSD2O94868 740 aa7.38□□□□□ -1.23
SPG11-220ENST00000559933 SAMD7Q7Z3H4 446 aa7.38□□□□□ -1.23
SPG11-220ENST00000559933 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.38□□□□□ -1.23
SPG11-220ENST00000559933 NECTIN2Q92692 538 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms