RNA–Protein interactions for RNA: ENST00000559889.5

IDH3A-217, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 1 (best)

Gene IDH3A, Length 2,461 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-217ENST00000559889 A0A1W2PP64 1363 aa12.75□□□□□ -0.37
IDH3A-217ENST00000559889 SOX12O15370 315 aa12.75□□□□□ -0.37
IDH3A-217ENST00000559889 EDC4Q6P2E9 1401 aaKnown RBP12.74□□□□□ -0.37
IDH3A-217ENST00000559889 HDGFL2Q7Z4V5 671 aaPredicted RBP12.74□□□□□ -0.37
IDH3A-217ENST00000559889 USP47Q96K76 1375 aa12.74□□□□□ -0.37
IDH3A-217ENST00000559889 WDR17Q8IZU2 1322 aa12.73□□□□□ -0.37
IDH3A-217ENST00000559889 USP54Q70EL1 1684 aa12.73□□□□□ -0.37
IDH3A-217ENST00000559889 FAM196AQ6ZSG2 479 aa12.73□□□□□ -0.37
IDH3A-217ENST00000559889 TERF2IPQ9NYB0 399 aa12.73□□□□□ -0.37
IDH3A-217ENST00000559889 DISP2A7MBM2 1401 aa12.73□□□□□ -0.37
IDH3A-217ENST00000559889 BAG6P46379 1132 aa12.72□□□□□ -0.37
IDH3A-217ENST00000559889 TIMELESSQ9UNS1 1208 aa12.72□□□□□ -0.37
IDH3A-217ENST00000559889 NINLQ9Y2I6 1382 aa12.72□□□□□ -0.37
IDH3A-217ENST00000559889 PDE3BQ13370 1112 aa12.72□□□□□ -0.37
IDH3A-217ENST00000559889 TOM1L2Q6ZVM7 507 aa12.72□□□□□ -0.37
IDH3A-217ENST00000559889 SLC24A1O60721 1099 aa12.71□□□□□ -0.37
IDH3A-217ENST00000559889 TRIM37O94972 964 aa12.71□□□□□ -0.37
IDH3A-217ENST00000559889 EN1Q05925 392 aaPredicted RBP12.71□□□□□ -0.37
IDH3A-217ENST00000559889 RGPD1P0DJD0 1748 aa12.71□□□□□ -0.37
IDH3A-217ENST00000559889 TNS1Q9HBL0 1735 aaKnown RBP12.71□□□□□ -0.37
IDH3A-217ENST00000559889 PARP4Q9UKK3 1724 aaKnown RBP12.71□□□□□ -0.37
IDH3A-217ENST00000559889 OVOS2A0A0J9YW53 1432 aa12.71□□□□□ -0.38
IDH3A-217ENST00000559889 OVOS2Q6IE36 1432 aa12.71□□□□□ -0.38
IDH3A-217ENST00000559889 ABCC6O95255 1503 aa12.7□□□□□ -0.38
IDH3A-217ENST00000559889 CARD10Q9BWT7 1032 aa12.69□□□□□ -0.38
IDH3A-217ENST00000559889 RGPD5Q99666 1765 aa12.69□□□□□ -0.38
IDH3A-217ENST00000559889 LRRC37A3O60309 1634 aa12.68□□□□□ -0.38
IDH3A-217ENST00000559889 TMF1P82094 1093 aa12.68□□□□□ -0.38
IDH3A-217ENST00000559889 CAMKK2Q96RR4 588 aa12.68□□□□□ -0.38
IDH3A-217ENST00000559889 ANKRD36BQ8N2N9 1353 aa12.68□□□□□ -0.38
IDH3A-217ENST00000559889 PEAK1Q9H792 1746 aa12.68□□□□□ -0.38
IDH3A-217ENST00000559889 ERBB3P21860 1342 aa12.68□□□□□ -0.38
IDH3A-217ENST00000559889 EZH2Q15910 746 aaKnown RBP12.67□□□□□ -0.38
IDH3A-217ENST00000559889 DDB1Q16531 1140 aa12.67□□□□□ -0.38
IDH3A-217ENST00000559889 CSB-PGBD3P0DP91 1061 aa12.67□□□□□ -0.38
IDH3A-217ENST00000559889 APBA3O96018 575 aa12.66□□□□□ -0.38
IDH3A-217ENST00000559889 WNK3Q9BYP7 1800 aa12.66□□□□□ -0.38
IDH3A-217ENST00000559889 CDCA7Q9BWT1 371 aaPredicted RBP12.66□□□□□ -0.38
IDH3A-217ENST00000559889 OVOS2A0A0G2JMS6 1433 aa12.66□□□□□ -0.38
IDH3A-217ENST00000559889 MARCH10Q8NA82 808 aaPredicted RBP12.65□□□□□ -0.38
IDH3A-217ENST00000559889 CCDC7Q96M83 1385 aa12.65□□□□□ -0.38
IDH3A-217ENST00000559889 LTN1O94822 1766 aa12.65□□□□□ -0.38
IDH3A-217ENST00000559889 PSDA5PKW4 1024 aaPredicted RBP12.64□□□□□ -0.39
IDH3A-217ENST00000559889 FBLN1P23142 703 aa12.64□□□□□ -0.39
IDH3A-217ENST00000559889 C11orf95C9JLR9 678 aaPredicted RBP12.64□□□□□ -0.39
IDH3A-217ENST00000559889 ANKRD24Q8TF21 1146 aa12.64□□□□□ -0.39
IDH3A-217ENST00000559889 COG3Q96JB2 828 aa12.64□□□□□ -0.39
IDH3A-217ENST00000559889 PARD3Q8TEW0 1356 aa12.63□□□□□ -0.39
IDH3A-217ENST00000559889 BCL9O00512 1426 aa12.63□□□□□ -0.39
IDH3A-217ENST00000559889 FYB1O15117 783 aa12.63□□□□□ -0.39
IDH3A-217ENST00000559889 PTF1AQ7RTS3 328 aa12.63□□□□□ -0.39
IDH3A-217ENST00000559889 MIER1Q8N108 512 aa12.63□□□□□ -0.39
IDH3A-217ENST00000559889 IP6K1Q92551 441 aa12.63□□□□□ -0.39
IDH3A-217ENST00000559889 CDCA8Q53HL2 280 aa12.63□□□□□ -0.39
IDH3A-217ENST00000559889 MAP3K19Q56UN5 1328 aa12.63□□□□□ -0.39
IDH3A-217ENST00000559889 NLRP2Q9NX02 1062 aa12.62□□□□□ -0.39
IDH3A-217ENST00000559889 CARD14Q9BXL6 1004 aa12.62□□□□□ -0.39
IDH3A-217ENST00000559889 EXOC5O00471 708 aa12.61□□□□□ -0.39
IDH3A-217ENST00000559889 R3HDM1Q15032 1099 aaKnown RBP12.61□□□□□ -0.39
IDH3A-217ENST00000559889 TNS2Q63HR2 1409 aa12.61□□□□□ -0.39
IDH3A-217ENST00000559889 GGNBP2Q9H3C7 697 aa12.61□□□□□ -0.39
IDH3A-217ENST00000559889 RREB1Q92766 1687 aa12.61□□□□□ -0.39
IDH3A-217ENST00000559889 SBF2Q86WG5 1849 aa12.6□□□□□ -0.39
IDH3A-217ENST00000559889 MYOM1P52179 1685 aa12.6□□□□□ -0.39
IDH3A-217ENST00000559889 HOXC9P31274 260 aa12.6□□□□□ -0.39
IDH3A-217ENST00000559889 BCL11BQ9C0K0 894 aaPredicted RBP12.6□□□□□ -0.39
IDH3A-217ENST00000559889 PLSCR1O15162 318 aa12.59□□□□□ -0.39
IDH3A-217ENST00000559889 IL2RBP14784 551 aa12.59□□□□□ -0.39
IDH3A-217ENST00000559889 RRS1Q15050 365 aaKnown RBP12.59□□□□□ -0.39
IDH3A-217ENST00000559889 NUP188Q5SRE5 1749 aa12.58□□□□□ -0.39
IDH3A-217ENST00000559889 LTV1Q96GA3 475 aaPredicted RBP12.58□□□□□ -0.4
IDH3A-217ENST00000559889 LRP5O75197 1615 aa12.58□□□□□ -0.4
IDH3A-217ENST00000559889 YTHDC1Q96MU7 727 aaKnown RBP12.57□□□□□ -0.4
IDH3A-217ENST00000559889 AMPHP49418 695 aa12.57□□□□□ -0.4
IDH3A-217ENST00000559889 PROM2Q8N271 834 aa12.57□□□□□ -0.4
IDH3A-217ENST00000559889 NSD3Q9BZ95 1437 aa12.56□□□□□ -0.4
IDH3A-217ENST00000559889 KCNQ2O43526 872 aa12.56□□□□□ -0.4
IDH3A-217ENST00000559889 RTL1A6NKG5 1358 aa12.56□□□□□ -0.4
IDH3A-217ENST00000559889 RGPD3A6NKT7 1758 aaPredicted RBP12.56□□□□□ -0.4
IDH3A-217ENST00000559889 RGPD4Q7Z3J3 1758 aa12.56□□□□□ -0.4
IDH3A-217ENST00000559889 HSPA5P11021 654 aaKnown RBP12.55□□□□□ -0.4
IDH3A-217ENST00000559889 FAM208AQ9UK61 1670 aaKnown RBP12.55□□□□□ -0.4
IDH3A-217ENST00000559889 EIF4G2P78344 907 aaKnown RBP eCLIP12.55□□□□□ -0.4
IDH3A-217ENST00000559889 KIF20BQ96Q89 1820 aa12.54□□□□□ -0.4
IDH3A-217ENST00000559889 NBPF14Q5TI25 921 aa12.54□□□□□ -0.4
IDH3A-217ENST00000559889 NBPF6Q5VWK0 638 aa12.54□□□□□ -0.4
IDH3A-217ENST00000559889 NBPF4Q96M43 638 aa12.54□□□□□ -0.4
IDH3A-217ENST00000559889 HSP90AB2PQ58FF8 381 aa12.53□□□□□ -0.4
IDH3A-217ENST00000559889 ACSBG1Q96GR2 724 aa12.53□□□□□ -0.4
IDH3A-217ENST00000559889 ANO8Q9HCE9 1232 aaPredicted RBP12.53□□□□□ -0.4
IDH3A-217ENST00000559889 INSRP06213 1382 aa12.52□□□□□ -0.4
IDH3A-217ENST00000559889 MEGF6O75095 1541 aa12.52□□□□□ -0.4
IDH3A-217ENST00000559889 NHSQ6T4R5 1651 aa12.52□□□□□ -0.4
IDH3A-217ENST00000559889 RGPD2P0DJD1 1756 aa12.52□□□□□ -0.4
IDH3A-217ENST00000559889 KIF24Q5T7B8 1368 aa12.52□□□□□ -0.41
IDH3A-217ENST00000559889 FLT4P35916 1363 aa12.52□□□□□ -0.41
IDH3A-217ENST00000559889 CENPBP07199 599 aaPredicted RBP12.51□□□□□ -0.41
IDH3A-217ENST00000559889 TXNRD1Q16881 649 aa12.51□□□□□ -0.41
IDH3A-217ENST00000559889 DDX54Q8TDD1 881 aaKnown RBP12.51□□□□□ -0.41
IDH3A-217ENST00000559889 EMILIN1Q9Y6C2 1016 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms