RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 STAC3Q96MF2 364 aa15.73■□□□□ 0.11
TRAF3-207ENST00000559734 CABP2Q9NPB3 220 aa15.73■□□□□ 0.11
TRAF3-207ENST00000559734 SBF2Q86WG5 1849 aa15.73■□□□□ 0.11
TRAF3-207ENST00000559734 TXNRD1Q16881 649 aa15.72■□□□□ 0.11
TRAF3-207ENST00000559734 MARCH10Q8NA82 808 aaPredicted RBP15.72■□□□□ 0.11
TRAF3-207ENST00000559734 SYT17Q9BSW7 474 aa15.72■□□□□ 0.11
TRAF3-207ENST00000559734 AATKQ6ZMQ8 1374 aa15.72■□□□□ 0.11
TRAF3-207ENST00000559734 CSB-PGBD3P0DP91 1061 aa15.71■□□□□ 0.11
TRAF3-207ENST00000559734 SOX12O15370 315 aa15.7■□□□□ 0.1
TRAF3-207ENST00000559734 SLC15A2Q16348 729 aa15.7■□□□□ 0.1
TRAF3-207ENST00000559734 WDR17Q8IZU2 1322 aa15.69■□□□□ 0.1
TRAF3-207ENST00000559734 SLIT3O75094 1523 aa15.69■□□□□ 0.1
TRAF3-207ENST00000559734 C1QTNF8P60827 252 aa15.69■□□□□ 0.1
TRAF3-207ENST00000559734 MTFR1LQ9H019 292 aa15.69■□□□□ 0.1
TRAF3-207ENST00000559734 USP6P35125 1406 aa15.68■□□□□ 0.1
TRAF3-207ENST00000559734 WNK3Q9BYP7 1800 aa15.68■□□□□ 0.1
TRAF3-207ENST00000559734 AKAP12Q02952 1782 aa15.68■□□□□ 0.1
TRAF3-207ENST00000559734 CDCA7Q9BWT1 371 aaPredicted RBP15.68■□□□□ 0.1
TRAF3-207ENST00000559734 CENPJQ9HC77 1338 aaPredicted RBP15.68■□□□□ 0.1
TRAF3-207ENST00000559734 NBPF1Q3BBV0 1214 aa15.67■□□□□ 0.1
TRAF3-207ENST00000559734 CABP1Q9NZU7 370 aa15.67■□□□□ 0.1
TRAF3-207ENST00000559734 AXIN2Q9Y2T1 843 aa15.67■□□□□ 0.1
TRAF3-207ENST00000559734 CPSF1Q10570 1443 aaKnown RBP15.67■□□□□ 0.1
TRAF3-207ENST00000559734 BRD4O60885 1362 aaPredicted RBP15.66■□□□□ 0.1
TRAF3-207ENST00000559734 KLHL34Q8N239 644 aa15.66■□□□□ 0.1
TRAF3-207ENST00000559734 EXOC5O00471 708 aa15.65■□□□□ 0.1
TRAF3-207ENST00000559734 ACSBG1Q96GR2 724 aa15.65■□□□□ 0.1
TRAF3-207ENST00000559734 ARXQ96QS3 562 aa15.65■□□□□ 0.1
TRAF3-207ENST00000559734 BCL9O00512 1426 aa15.65■□□□□ 0.1
TRAF3-207ENST00000559734 GPR162Q16538 588 aa15.64■□□□□ 0.09
TRAF3-207ENST00000559734 COL18A1P39060 1754 aa15.64■□□□□ 0.09
TRAF3-207ENST00000559734 PIK3C2AO00443 1686 aa15.63■□□□□ 0.09
TRAF3-207ENST00000559734 PELP1Q8IZL8 1130 aaKnown RBP15.63■□□□□ 0.09
TRAF3-207ENST00000559734 SGIP1Q9BQI5 828 aa15.63■□□□□ 0.09
TRAF3-207ENST00000559734 CARD10Q9BWT7 1032 aa15.63■□□□□ 0.09
TRAF3-207ENST00000559734 KIAA1210Q9ULL0 1709 aa15.63■□□□□ 0.09
TRAF3-207ENST00000559734 ARHGEF25Q86VW2 580 aa15.62■□□□□ 0.09
TRAF3-207ENST00000559734 QRICH2Q9H0J4 1663 aa15.62■□□□□ 0.09
TRAF3-207ENST00000559734 TNS2Q63HR2 1409 aa15.61■□□□□ 0.09
TRAF3-207ENST00000559734 GIGYF1O75420 1035 aaPredicted RBP15.61■□□□□ 0.09
TRAF3-207ENST00000559734 KCNH5Q8NCM2 988 aa15.61■□□□□ 0.09
TRAF3-207ENST00000559734 CCDC7Q96M83 1385 aa15.61■□□□□ 0.09
TRAF3-207ENST00000559734 CHD4Q14839 1912 aa15.6■□□□□ 0.09
TRAF3-207ENST00000559734 ZNF827Q17R98 1081 aa15.59■□□□□ 0.09
TRAF3-207ENST00000559734 NHSQ6T4R5 1651 aa15.59■□□□□ 0.09
TRAF3-207ENST00000559734 TTC21BQ7Z4L5 1316 aa15.59■□□□□ 0.09
TRAF3-207ENST00000559734 RGPD5Q99666 1765 aa15.59■□□□□ 0.09
TRAF3-207ENST00000559734 IFFO2Q5TF58 517 aa15.57■□□□□ 0.08
TRAF3-207ENST00000559734 EVC2Q86UK5 1308 aa15.57■□□□□ 0.08
TRAF3-207ENST00000559734 MAP3K5Q99683 1374 aa15.57■□□□□ 0.08
TRAF3-207ENST00000559734 POLD1P28340 1107 aa15.56■□□□□ 0.08
TRAF3-207ENST00000559734 NLRP2Q9NX02 1062 aa15.56■□□□□ 0.08
TRAF3-207ENST00000559734 PAPPAQ13219 1627 aa15.56■□□□□ 0.08
TRAF3-207ENST00000559734 TRPM1Q7Z4N2 1603 aa15.56■□□□□ 0.08
TRAF3-207ENST00000559734 UTRNP46939 3433 aa15.55■□□□□ 0.08
TRAF3-207ENST00000559734 ABCC6O95255 1503 aa15.55■□□□□ 0.08
TRAF3-207ENST00000559734 NFAT5O94916 1531 aa15.54■□□□□ 0.08
TRAF3-207ENST00000559734 TTC21AQ8NDW8 1320 aa15.54■□□□□ 0.08
TRAF3-207ENST00000559734 IL2RBP14784 551 aa15.53■□□□□ 0.08
TRAF3-207ENST00000559734 ZNF692Q9BU19 519 aaPredicted RBP15.53■□□□□ 0.08
TRAF3-207ENST00000559734 LRRC4BQ9NT99 713 aa15.53■□□□□ 0.08
TRAF3-207ENST00000559734 BTAF1O14981 1849 aa15.52■□□□□ 0.08
TRAF3-207ENST00000559734 KTN1Q86UP2 1357 aaKnown RBP15.51■□□□□ 0.07
TRAF3-207ENST00000559734 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.51■□□□□ 0.07
TRAF3-207ENST00000559734 NLGN2Q8NFZ4 835 aa15.51■□□□□ 0.07
TRAF3-207ENST00000559734 ERBB3P21860 1342 aa15.5■□□□□ 0.07
TRAF3-207ENST00000559734 TFCP2L1Q9NZI6 479 aa15.5■□□□□ 0.07
TRAF3-207ENST00000559734 PNPLA7Q6ZV29 1317 aa15.49■□□□□ 0.07
TRAF3-207ENST00000559734 KCNQ4P56696 695 aa15.49■□□□□ 0.07
TRAF3-207ENST00000559734 ANKRD24Q8TF21 1146 aa15.49■□□□□ 0.07
TRAF3-207ENST00000559734 SLC16A10Q8TF71 515 aa15.49■□□□□ 0.07
TRAF3-207ENST00000559734 AKT1S1Q96B36 256 aa15.49■□□□□ 0.07
TRAF3-207ENST00000559734 SYTL4Q96C24 671 aaPredicted RBP15.49■□□□□ 0.07
TRAF3-207ENST00000559734 SHANK3Q9BYB0 1731 aa15.48■□□□□ 0.07
TRAF3-207ENST00000559734 DDX54Q8TDD1 881 aaKnown RBP15.48■□□□□ 0.07
TRAF3-207ENST00000559734 MSH5O43196 834 aa15.47■□□□□ 0.07
TRAF3-207ENST00000559734 SLC27A3Q5K4L6 730 aa15.47■□□□□ 0.07
TRAF3-207ENST00000559734 NME9Q86XW9 330 aa15.47■□□□□ 0.07
TRAF3-207ENST00000559734 YBX3P16989 372 aaKnown RBP eCLIP15.45■□□□□ 0.06
TRAF3-207ENST00000559734 LTV1Q96GA3 475 aaPredicted RBP15.45■□□□□ 0.06
TRAF3-207ENST00000559734 ROCK2O75116 1388 aaKnown RBP15.45■□□□□ 0.06
TRAF3-207ENST00000559734 KAT6BQ8WYB5 2073 aa15.45■□□□□ 0.06
TRAF3-207ENST00000559734 GRIN3BO60391 1043 aa15.44■□□□□ 0.06
TRAF3-207ENST00000559734 LTN1O94822 1766 aa15.44■□□□□ 0.06
TRAF3-207ENST00000559734 L3MBTL2Q969R5 705 aa15.43■□□□□ 0.06
TRAF3-207ENST00000559734 USP31Q70CQ4 1352 aa15.43■□□□□ 0.06
TRAF3-207ENST00000559734 QSER1Q2KHR3 1735 aa15.43■□□□□ 0.06
TRAF3-207ENST00000559734 MON2Q7Z3U7 1717 aa15.43■□□□□ 0.06
TRAF3-207ENST00000559734 ATP10DQ9P241 1426 aa15.43■□□□□ 0.06
TRAF3-207ENST00000559734 PRIM1P49642 420 aaKnown RBP15.42■□□□□ 0.06
TRAF3-207ENST00000559734 MSL1Q68DK7 614 aa15.42■□□□□ 0.06
TRAF3-207ENST00000559734 TMC1Q8TDI8 760 aa15.42■□□□□ 0.06
TRAF3-207ENST00000559734 ZNF526Q8TF50 670 aaPredicted RBP15.42■□□□□ 0.06
TRAF3-207ENST00000559734 TUBGCP6Q96RT7 1819 aa15.42■□□□□ 0.06
TRAF3-207ENST00000559734 CCNL1Q9UK58 526 aaPredicted RBP15.41■□□□□ 0.06
TRAF3-207ENST00000559734 GPBP1L1Q9HC44 474 aaPredicted RBP15.4■□□□□ 0.06
TRAF3-207ENST00000559734 COL24A1Q17RW2 1714 aa15.4■□□□□ 0.06
TRAF3-207ENST00000559734 ANKRD36BQ8N2N9 1353 aa15.39■□□□□ 0.05
TRAF3-207ENST00000559734 SBNO2Q9Y2G9 1366 aa15.39■□□□□ 0.05
TRAF3-207ENST00000559734 HDGFL2Q7Z4V5 671 aaPredicted RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms