RNA–Protein interactions for RNA: ENST00000559422.1

LRRC49-216, Transcript of leucine rich repeat containing 49, humanhuman

TSL 5

Gene LRRC49, Length 727 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-216ENST00000559422 VASH1Q7L8A9 365 aaPredicted RBP11.81□□□□□ -0.52
LRRC49-216ENST00000559422 SEPT12Q8IYM1 358 aa11.81□□□□□ -0.52
LRRC49-216ENST00000559422 KCTD15Q96SI1 283 aaPredicted RBP11.81□□□□□ -0.52
LRRC49-216ENST00000559422 ARID3AQ99856 593 aa11.81□□□□□ -0.52
LRRC49-216ENST00000559422 PALM3A6NDB9 673 aaPredicted RBP11.8□□□□□ -0.52
LRRC49-216ENST00000559422 GIGYF1O75420 1035 aaPredicted RBP11.8□□□□□ -0.52
LRRC49-216ENST00000559422 TFIP11Q9UBB9 837 aaKnown RBP11.8□□□□□ -0.52
LRRC49-216ENST00000559422 CHIC2Q9UKJ5 165 aa11.8□□□□□ -0.52
LRRC49-216ENST00000559422 ATP9BO43861 1147 aa11.79□□□□□ -0.52
LRRC49-216ENST00000559422 GDF9O60383 454 aa11.79□□□□□ -0.52
LRRC49-216ENST00000559422 FOXC1Q12948 553 aa11.79□□□□□ -0.52
LRRC49-216ENST00000559422 TBC1D9Q6ZT07 1266 aa11.79□□□□□ -0.52
LRRC49-216ENST00000559422 RNF135Q8IUD6 432 aa11.79□□□□□ -0.52
LRRC49-216ENST00000559422 PIK3CDO00329 1044 aa11.78□□□□□ -0.52
LRRC49-216ENST00000559422 ARID5BQ14865 1188 aa11.78□□□□□ -0.52
LRRC49-216ENST00000559422 TLL2Q9Y6L7 1015 aa11.78□□□□□ -0.52
LRRC49-216ENST00000559422 GRM5P41594 1212 aa11.77□□□□□ -0.53
LRRC49-216ENST00000559422 CFAP70Q5T0N1 1121 aa11.77□□□□□ -0.53
LRRC49-216ENST00000559422 ADH1CP00326 375 aa11.76□□□□□ -0.53
LRRC49-216ENST00000559422 SKIP12755 728 aa11.76□□□□□ -0.53
LRRC49-216ENST00000559422 MAP7D1Q3KQU3 841 aa11.76□□□□□ -0.53
LRRC49-216ENST00000559422 SNIP1Q8TAD8 396 aaKnown RBP11.76□□□□□ -0.53
LRRC49-216ENST00000559422 MAFBQ9Y5Q3 323 aaPredicted RBP11.76□□□□□ -0.53
LRRC49-216ENST00000559422 LZTS3O60299 673 aaPredicted RBP11.75□□□□□ -0.53
LRRC49-216ENST00000559422 PRR20EP86478 221 aa11.75□□□□□ -0.53
LRRC49-216ENST00000559422 PRR20CP86479 221 aa11.75□□□□□ -0.53
LRRC49-216ENST00000559422 PRR20DP86480 221 aa11.75□□□□□ -0.53
LRRC49-216ENST00000559422 PRR20BP86481 221 aa11.75□□□□□ -0.53
LRRC49-216ENST00000559422 PRR20AP86496 221 aa11.75□□□□□ -0.53
LRRC49-216ENST00000559422 NR5A1Q13285 461 aa11.75□□□□□ -0.53
LRRC49-216ENST00000559422 INTS6LQ5JSJ4 861 aaKnown RBP11.74□□□□□ -0.53
LRRC49-216ENST00000559422 PLEKHM2Q8IWE5 1019 aa11.74□□□□□ -0.53
LRRC49-216ENST00000559422 PLPP7Q8NBV4 271 aa11.74□□□□□ -0.53
LRRC49-216ENST00000559422 LMOD1P29536 600 aaPredicted RBP11.73□□□□□ -0.53
LRRC49-216ENST00000559422 TRIM67Q6ZTA4 783 aa11.73□□□□□ -0.53
LRRC49-216ENST00000559422 CCDC85AQ96PX6 553 aaPredicted RBP11.73□□□□□ -0.53
LRRC49-216ENST00000559422 USP17L5A8MUK1 530 aa11.72□□□□□ -0.53
LRRC49-216ENST00000559422 ALDH1A1P00352 501 aa11.72□□□□□ -0.53
LRRC49-216ENST00000559422 FSHRP23945 695 aa11.72□□□□□ -0.53
LRRC49-216ENST00000559422 DHX9Q08211 1270 aaKnown RBP11.72□□□□□ -0.53
LRRC49-216ENST00000559422 TRAF7Q6Q0C0 670 aa11.72□□□□□ -0.53
LRRC49-216ENST00000559422 CYP4X1Q8N118 509 aa11.72□□□□□ -0.53
LRRC49-216ENST00000559422 TOR4AQ9NXH8 423 aa11.72□□□□□ -0.53
LRRC49-216ENST00000559422 TSGA10IPQ3SY00 556 aa11.71□□□□□ -0.53
LRRC49-216ENST00000559422 TRIM52Q96A61 297 aa11.71□□□□□ -0.53
LRRC49-216ENST00000559422 DOLKQ9UPQ8 538 aa11.71□□□□□ -0.53
LRRC49-216ENST00000559422 TTC24A2A3L6 582 aaPredicted RBP11.7□□□□□ -0.54
LRRC49-216ENST00000559422 USP17L3A6NCW0 530 aa11.7□□□□□ -0.54
LRRC49-216ENST00000559422 USP17L4A6NCW7 530 aa11.7□□□□□ -0.54
LRRC49-216ENST00000559422 TNFRSF10AO00220 468 aa11.7□□□□□ -0.54
LRRC49-216ENST00000559422 PPP1R15AO75807 674 aaPredicted RBP11.7□□□□□ -0.54
LRRC49-216ENST00000559422 USP17L2Q6R6M4 530 aa11.7□□□□□ -0.54
LRRC49-216ENST00000559422 USP17L1Q7RTZ2 530 aa11.7□□□□□ -0.54
LRRC49-216ENST00000559422 ERVH48-1M5A8F1 160 aa11.69□□□□□ -0.54
LRRC49-216ENST00000559422 RFX1P22670 979 aa11.69□□□□□ -0.54
LRRC49-216ENST00000559422 SRPK2P78362 688 aaKnown RBP11.69□□□□□ -0.54
LRRC49-216ENST00000559422 CCDC116Q8IYX3 515 aa11.69□□□□□ -0.54
LRRC49-216ENST00000559422 PCDHB11Q9Y5F2 797 aa11.69□□□□□ -0.54
LRRC49-216ENST00000559422 WASF2Q9Y6W5 498 aa11.69□□□□□ -0.54
LRRC49-216ENST00000559422 RAB15P59190 212 aa11.68□□□□□ -0.54
LRRC49-216ENST00000559422 NCOA4Q13772 614 aa11.68□□□□□ -0.54
LRRC49-216ENST00000559422 EML3Q32P44 896 aa11.68□□□□□ -0.54
LRRC49-216ENST00000559422 PBXIP1Q96AQ6 731 aa11.68□□□□□ -0.54
LRRC49-216ENST00000559422 NR3C2P08235 984 aa11.67□□□□□ -0.54
LRRC49-216ENST00000559422 DEPDC4Q8N2C3 294 aa11.67□□□□□ -0.54
LRRC49-216ENST00000559422 SIRT1Q96EB6 747 aa11.67□□□□□ -0.54
LRRC49-216ENST00000559422 J3QL48 77 aa11.66□□□□□ -0.54
LRRC49-216ENST00000559422 USP4Q13107 963 aa11.66□□□□□ -0.54
LRRC49-216ENST00000559422 NNTQ13423 1086 aa11.66□□□□□ -0.54
LRRC49-216ENST00000559422 KANK4Q5T7N3 995 aaPredicted RBP11.66□□□□□ -0.54
LRRC49-216ENST00000559422 PPP1R26Q5T8A7 1209 aaPredicted RBP11.66□□□□□ -0.54
LRRC49-216ENST00000559422 CDCA7Q9BWT1 371 aaPredicted RBP11.66□□□□□ -0.54
LRRC49-216ENST00000559422 VRTNQ9H8Y1 702 aa11.66□□□□□ -0.54
LRRC49-216ENST00000559422 SMPD1P17405 629 aa11.65□□□□□ -0.54
LRRC49-216ENST00000559422 EMILIN1Q9Y6C2 1016 aa11.65□□□□□ -0.54
LRRC49-216ENST00000559422 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.64□□□□□ -0.55
LRRC49-216ENST00000559422 OXLD1Q5BKU9 147 aa11.64□□□□□ -0.55
LRRC49-216ENST00000559422 PGPEP1Q9NXJ5 209 aa11.64□□□□□ -0.55
LRRC49-216ENST00000559422 MKRN1Q9UHC7 482 aaKnown RBP11.64□□□□□ -0.55
LRRC49-216ENST00000559422 PDZRN3Q9UPQ7 1066 aa11.64□□□□□ -0.55
LRRC49-216ENST00000559422 NOD1Q9Y239 953 aa11.64□□□□□ -0.55
LRRC49-216ENST00000559422 ATP5J2-PTCD1G3V325 749 aa11.63□□□□□ -0.55
LRRC49-216ENST00000559422 ERVK-9P63128 1117 aa11.63□□□□□ -0.55
LRRC49-216ENST00000559422 TMPRSS4Q9NRS4 437 aa11.63□□□□□ -0.55
LRRC49-216ENST00000559422 CC2D2BQ6DHV5 1058 aa11.62□□□□□ -0.55
LRRC49-216ENST00000559422 TRIM50Q86XT4 487 aa11.62□□□□□ -0.55
LRRC49-216ENST00000559422 ACIN1Q9UKV3 1341 aaKnown RBP11.61□□□□□ -0.55
LRRC49-216ENST00000559422 MYCP01106 439 aaPredicted RBP11.61□□□□□ -0.55
LRRC49-216ENST00000559422 MYT1Q01538 1121 aa11.61□□□□□ -0.55
LRRC49-216ENST00000559422 ZNF784Q8NCA9 323 aaPredicted RBP11.61□□□□□ -0.55
LRRC49-216ENST00000559422 ARXQ96QS3 562 aa11.61□□□□□ -0.55
LRRC49-216ENST00000559422 KLF16Q9BXK1 252 aaPredicted RBP11.61□□□□□ -0.55
LRRC49-216ENST00000559422 LILRA1O75019 489 aa11.59□□□□□ -0.55
LRRC49-216ENST00000559422 ATG7O95352 703 aa11.59□□□□□ -0.55
LRRC49-216ENST00000559422 SCTRP47872 440 aa11.59□□□□□ -0.55
LRRC49-216ENST00000559422 ATP1A2P50993 1020 aa11.59□□□□□ -0.55
LRRC49-216ENST00000559422 ESF1Q9H501 851 aaKnown RBP11.59□□□□□ -0.55
LRRC49-216ENST00000559422 FAM196BA6NMK8 535 aa11.58□□□□□ -0.56
LRRC49-216ENST00000559422 CDCA8Q53HL2 280 aa11.58□□□□□ -0.56
LRRC49-216ENST00000559422 CYLDQ9NQC7 956 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms