RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 AXIN2Q9Y2T1 843 aa25.91■■□□□ 1.74
CASC4-209ENST00000559222 CCDC9Q9Y3X0 531 aaKnown RBP25.91■■□□□ 1.74
CASC4-209ENST00000559222 CCDC7Q96M83 1385 aa25.91■■□□□ 1.74
CASC4-209ENST00000559222 WASHC2AQ641Q2 1341 aa25.9■■□□□ 1.74
CASC4-209ENST00000559222 COG3Q96JB2 828 aa25.88■■□□□ 1.73
CASC4-209ENST00000559222 SPATA31A5Q5VU36 1347 aa25.88■■□□□ 1.73
CASC4-209ENST00000559222 SPATA31A7Q8IWB4 1347 aa25.88■■□□□ 1.73
CASC4-209ENST00000559222 LARP1Q6PKG0 1096 aaKnown RBP25.87■■□□□ 1.73
CASC4-209ENST00000559222 THSD7AQ9UPZ6 1657 aa25.87■■□□□ 1.73
CASC4-209ENST00000559222 PEAK1Q9H792 1746 aa25.86■■□□□ 1.73
CASC4-209ENST00000559222 ABCC6O95255 1503 aa25.86■■□□□ 1.73
CASC4-209ENST00000559222 WNK3Q9BYP7 1800 aa25.84■■□□□ 1.73
CASC4-209ENST00000559222 SPATA31A1Q5TZJ5 1347 aa25.84■■□□□ 1.73
CASC4-209ENST00000559222 EVA1CP58658 441 aa25.82■■□□□ 1.72
CASC4-209ENST00000559222 FAM98CQ17RN3 349 aaKnown RBP25.82■■□□□ 1.72
CASC4-209ENST00000559222 MAP3K19Q56UN5 1328 aa25.82■■□□□ 1.72
CASC4-209ENST00000559222 USP35Q9P2H5 1018 aa25.81■■□□□ 1.72
CASC4-209ENST00000559222 RGPD2P0DJD1 1756 aa25.8■■□□□ 1.72
CASC4-209ENST00000559222 RRS1Q15050 365 aaKnown RBP25.8■■□□□ 1.72
CASC4-209ENST00000559222 CGNL1Q0VF96 1302 aa25.8■■□□□ 1.72
CASC4-209ENST00000559222 MAP2P11137 1827 aaKnown RBP25.79■■□□□ 1.72
CASC4-209ENST00000559222 CRB1P82279 1406 aa25.79■■□□□ 1.72
CASC4-209ENST00000559222 SEPT12Q8IYM1 358 aa25.78■■□□□ 1.72
CASC4-209ENST00000559222 ONECUT3O60422 494 aaPredicted RBP25.76■■□□□ 1.71
CASC4-209ENST00000559222 WDR17Q8IZU2 1322 aa25.76■■□□□ 1.71
CASC4-209ENST00000559222 ERBB3P21860 1342 aa25.74■■□□□ 1.71
CASC4-209ENST00000559222 PARP4Q9UKK3 1724 aaKnown RBP25.74■■□□□ 1.71
CASC4-209ENST00000559222 A0A0G2JS52 829 aa25.73■■□□□ 1.71
CASC4-209ENST00000559222 HOXC9P31274 260 aa25.73■■□□□ 1.71
CASC4-209ENST00000559222 MYT1Q01538 1121 aa25.73■■□□□ 1.71
CASC4-209ENST00000559222 TOM1L2Q6ZVM7 507 aa25.73■■□□□ 1.71
CASC4-209ENST00000559222 IP6K1Q92551 441 aa25.73■■□□□ 1.71
CASC4-209ENST00000559222 LRRC37A3O60309 1634 aa25.73■■□□□ 1.71
CASC4-209ENST00000559222 BLMP54132 1417 aaPredicted RBP25.72■■□□□ 1.71
CASC4-209ENST00000559222 FAM208AQ9UK61 1670 aaKnown RBP25.72■■□□□ 1.71
CASC4-209ENST00000559222 EMILIN1Q9Y6C2 1016 aa25.72■■□□□ 1.71
CASC4-209ENST00000559222 PER1O15534 1290 aaPredicted RBP25.71■■□□□ 1.71
CASC4-209ENST00000559222 CSB-PGBD3P0DP91 1061 aa25.71■■□□□ 1.71
CASC4-209ENST00000559222 TNNT2P45379 298 aaPredicted RBP25.71■■□□□ 1.71
CASC4-209ENST00000559222 AMER1Q5JTC6 1135 aaPredicted RBP25.71■■□□□ 1.71
CASC4-209ENST00000559222 TCP11L2Q8N4U5 519 aa25.71■■□□□ 1.71
CASC4-209ENST00000559222 ANKRD24Q8TF21 1146 aa25.71■■□□□ 1.71
CASC4-209ENST00000559222 RTL1A6NKG5 1358 aa25.7■■□□□ 1.71
CASC4-209ENST00000559222 AMPHP49418 695 aa25.7■■□□□ 1.7
CASC4-209ENST00000559222 LTV1Q96GA3 475 aaPredicted RBP25.7■■□□□ 1.7
CASC4-209ENST00000559222 KNSTRNQ9Y448 316 aa25.69■■□□□ 1.7
CASC4-209ENST00000559222 NSD2O96028 1365 aa25.69■■□□□ 1.7
CASC4-209ENST00000559222 BARGINQ6ZT62 677 aa25.68■■□□□ 1.7
CASC4-209ENST00000559222 DISP2A7MBM2 1401 aa25.67■■□□□ 1.7
CASC4-209ENST00000559222 FAM182BQ5T319 152 aa25.67■■□□□ 1.7
CASC4-209ENST00000559222 CARD10Q9BWT7 1032 aa25.66■■□□□ 1.7
CASC4-209ENST00000559222 ZEB1P37275 1124 aaPredicted RBP25.65■■□□□ 1.7
CASC4-209ENST00000559222 HSP90AB2PQ58FF8 381 aa25.65■■□□□ 1.7
CASC4-209ENST00000559222 UPF1Q92900 1129 aaKnown RBP eCLIP25.65■■□□□ 1.7
CASC4-209ENST00000559222 FLT4P35916 1363 aa25.65■■□□□ 1.7
CASC4-209ENST00000559222 KRT27Q7Z3Y8 459 aa25.64■■□□□ 1.7
CASC4-209ENST00000559222 NLRP2Q9NX02 1062 aa25.64■■□□□ 1.7
CASC4-209ENST00000559222 POLKQ9UBT6 870 aa25.64■■□□□ 1.7
CASC4-209ENST00000559222 THRAP3Q9Y2W1 955 aaKnown RBP25.64■■□□□ 1.7
CASC4-209ENST00000559222 EP400Q96L91 3159 aa25.63■■□□□ 1.69
CASC4-209ENST00000559222 CNGB1Q14028 1251 aaPredicted RBP25.63■■□□□ 1.69
CASC4-209ENST00000559222 PPM1GO15355 546 aaPredicted RBP25.62■■□□□ 1.69
CASC4-209ENST00000559222 CC2D1BQ5T0F9 858 aaKnown RBP25.62■■□□□ 1.69
CASC4-209ENST00000559222 MORC1Q86VD1 984 aa25.62■■□□□ 1.69
CASC4-209ENST00000559222 INSRP06213 1382 aa25.61■■□□□ 1.69
CASC4-209ENST00000559222 SMG6Q86US8 1419 aaKnown RBP25.61■■□□□ 1.69
CASC4-209ENST00000559222 KIF24Q5T7B8 1368 aa25.59■■□□□ 1.69
CASC4-209ENST00000559222 USHBP1Q8N6Y0 703 aa25.58■■□□□ 1.69
CASC4-209ENST00000559222 SHANK3Q9BYB0 1731 aa25.57■■□□□ 1.68
CASC4-209ENST00000559222 NBPF6Q5VWK0 638 aa25.56■■□□□ 1.68
CASC4-209ENST00000559222 NBPF4Q96M43 638 aa25.56■■□□□ 1.68
CASC4-209ENST00000559222 TNS1Q9HBL0 1735 aaKnown RBP25.55■■□□□ 1.68
CASC4-209ENST00000559222 MEGF6O75095 1541 aa25.55■■□□□ 1.68
CASC4-209ENST00000559222 NPC1L1Q9UHC9 1359 aa25.55■■□□□ 1.68
CASC4-209ENST00000559222 TNS2Q63HR2 1409 aa25.54■■□□□ 1.68
CASC4-209ENST00000559222 SBF2Q86WG5 1849 aa25.53■■□□□ 1.68
CASC4-209ENST00000559222 RGPD1P0DJD0 1748 aa25.51■■□□□ 1.68
CASC4-209ENST00000559222 DDB1Q16531 1140 aa25.51■■□□□ 1.67
CASC4-209ENST00000559222 IL2RBP14784 551 aa25.5■■□□□ 1.67
CASC4-209ENST00000559222 PDE3BQ13370 1112 aa25.5■■□□□ 1.67
CASC4-209ENST00000559222 EIF4A2Q14240 407 aaKnown RBP25.5■■□□□ 1.67
CASC4-209ENST00000559222 NCAPD2Q15021 1401 aa25.5■■□□□ 1.67
CASC4-209ENST00000559222 MARCH10Q8NA82 808 aaPredicted RBP25.49■■□□□ 1.67
CASC4-209ENST00000559222 CDCA7Q9BWT1 371 aaPredicted RBP25.48■■□□□ 1.67
CASC4-209ENST00000559222 DDX10Q13206 875 aaKnown RBP25.46■■□□□ 1.67
CASC4-209ENST00000559222 EYA1Q99502 592 aa25.46■■□□□ 1.67
CASC4-209ENST00000559222 OVOS2A0A0G2JMS6 1433 aa25.46■■□□□ 1.67
CASC4-209ENST00000559222 PKD1L3Q7Z443 1732 aa25.45■■□□□ 1.66
CASC4-209ENST00000559222 MTHFSP49914 203 aa25.44■■□□□ 1.66
CASC4-209ENST00000559222 COL3A1P02461 1466 aaPredicted RBP25.44■■□□□ 1.66
CASC4-209ENST00000559222 EXOC5O00471 708 aa25.43■■□□□ 1.66
CASC4-209ENST00000559222 FAM196AQ6ZSG2 479 aa25.42■■□□□ 1.66
CASC4-209ENST00000559222 TRIM37O94972 964 aa25.41■■□□□ 1.66
CASC4-209ENST00000559222 PTF1AQ7RTS3 328 aa25.41■■□□□ 1.66
CASC4-209ENST00000559222 DEFB132Q7Z7B7 95 aa25.41■■□□□ 1.66
CASC4-209ENST00000559222 DOT1LQ8TEK3 1739 aa25.4■■□□□ 1.66
CASC4-209ENST00000559222 IGSF1Q8N6C5 1336 aa25.39■■□□□ 1.66
CASC4-209ENST00000559222 SRCAPQ6ZRS2 3230 aa25.39■■□□□ 1.65
CASC4-209ENST00000559222 NHSQ6T4R5 1651 aa25.39■■□□□ 1.65
CASC4-209ENST00000559222 IL13P35225 146 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms