RNA–Protein interactions for RNA: ENST00000559099.5

HMG20A-208, Transcript of high mobility group 20A, humanhuman

TSL 5

Gene HMG20A, Length 558 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-208ENST00000559099 ARHGEF28Q8N1W1 1705 aaKnown RBP11.95□□□□□ -0.5
HMG20A-208ENST00000559099 MARCH10Q8NA82 808 aaPredicted RBP11.94□□□□□ -0.5
HMG20A-208ENST00000559099 TUBGCP6Q96RT7 1819 aa11.93□□□□□ -0.5
HMG20A-208ENST00000559099 POLD1P28340 1107 aa11.93□□□□□ -0.5
HMG20A-208ENST00000559099 SIRT1Q96EB6 747 aa11.93□□□□□ -0.5
HMG20A-208ENST00000559099 CRB1P82279 1406 aa11.93□□□□□ -0.5
HMG20A-208ENST00000559099 TNS2Q63HR2 1409 aa11.93□□□□□ -0.5
HMG20A-208ENST00000559099 PRR36Q9H6K5 1346 aa11.92□□□□□ -0.5
HMG20A-208ENST00000559099 TULP4Q9NRJ4 1543 aa11.92□□□□□ -0.5
HMG20A-208ENST00000559099 NHSQ6T4R5 1651 aa11.92□□□□□ -0.5
HMG20A-208ENST00000559099 PAK3O75914 559 aaPredicted RBP11.92□□□□□ -0.5
HMG20A-208ENST00000559099 DDB1Q16531 1140 aa11.92□□□□□ -0.5
HMG20A-208ENST00000559099 CPDO75976 1380 aa11.92□□□□□ -0.5
HMG20A-208ENST00000559099 TOMM70O94826 608 aa11.91□□□□□ -0.5
HMG20A-208ENST00000559099 PIK3C2GO75747 1445 aa11.91□□□□□ -0.5
HMG20A-208ENST00000559099 SAFB2Q14151 953 aaKnown RBP eCLIP11.9□□□□□ -0.5
HMG20A-208ENST00000559099 SLC16A10Q8TF71 515 aa11.9□□□□□ -0.5
HMG20A-208ENST00000559099 NUTM2GQ5VZR2 741 aa11.89□□□□□ -0.51
HMG20A-208ENST00000559099 PNPLA7Q6ZV29 1317 aa11.88□□□□□ -0.51
HMG20A-208ENST00000559099 AKT1S1Q96B36 256 aa11.88□□□□□ -0.51
HMG20A-208ENST00000559099 PRAM1Q96QH2 718 aa11.88□□□□□ -0.51
HMG20A-208ENST00000559099 LRRC4BQ9NT99 713 aa11.88□□□□□ -0.51
HMG20A-208ENST00000559099 BTAF1O14981 1849 aa11.86□□□□□ -0.51
HMG20A-208ENST00000559099 HSPA1AP0DMV8 641 aaKnown RBP11.86□□□□□ -0.51
HMG20A-208ENST00000559099 HSPA1BP0DMV9 641 aaKnown RBP11.86□□□□□ -0.51
HMG20A-208ENST00000559099 NGDNQ8NEJ9 315 aaKnown RBP11.85□□□□□ -0.51
HMG20A-208ENST00000559099 CICQ96RK0 1608 aaPredicted RBP11.85□□□□□ -0.51
HMG20A-208ENST00000559099 FAM161AQ3B820 660 aa11.84□□□□□ -0.51
HMG20A-208ENST00000559099 USP19O94966 1318 aa11.84□□□□□ -0.51
HMG20A-208ENST00000559099 ANKRD30BQ9BXX2 1392 aa11.83□□□□□ -0.52
HMG20A-208ENST00000559099 HIRIP3Q9BW71 556 aaPredicted RBP11.83□□□□□ -0.52
HMG20A-208ENST00000559099 NMRK2Q9NPI5 230 aa11.83□□□□□ -0.52
HMG20A-208ENST00000559099 ITSN1Q15811 1721 aa11.83□□□□□ -0.52
HMG20A-208ENST00000559099 RBM46Q8TBY0 533 aaKnown RBP11.82□□□□□ -0.52
HMG20A-208ENST00000559099 SPATA31E1Q6ZUB1 1445 aa11.82□□□□□ -0.52
HMG20A-208ENST00000559099 EIF3AQ14152 1382 aaKnown RBP11.81□□□□□ -0.52
HMG20A-208ENST00000559099 COL18A1P39060 1754 aa11.81□□□□□ -0.52
HMG20A-208ENST00000559099 BRD4O60885 1362 aaPredicted RBP11.8□□□□□ -0.52
HMG20A-208ENST00000559099 TRPM1Q7Z4N2 1603 aa11.8□□□□□ -0.52
HMG20A-208ENST00000559099 CD2APQ9Y5K6 639 aa11.8□□□□□ -0.52
HMG20A-208ENST00000559099 KIAA1210Q9ULL0 1709 aa11.8□□□□□ -0.52
HMG20A-208ENST00000559099 USP6P35125 1406 aa11.79□□□□□ -0.52
HMG20A-208ENST00000559099 TOM1L2Q6ZVM7 507 aa11.79□□□□□ -0.52
HMG20A-208ENST00000559099 ACSBG1Q96GR2 724 aa11.79□□□□□ -0.52
HMG20A-208ENST00000559099 CDCA7Q9BWT1 371 aaPredicted RBP11.79□□□□□ -0.52
HMG20A-208ENST00000559099 C14orf93Q9H972 538 aaKnown RBP11.79□□□□□ -0.52
HMG20A-208ENST00000559099 ABCC6O95255 1503 aa11.78□□□□□ -0.52
HMG20A-208ENST00000559099 GCP02774 474 aa11.78□□□□□ -0.52
HMG20A-208ENST00000559099 FSTL1Q12841 308 aa11.78□□□□□ -0.52
HMG20A-208ENST00000559099 TFCP2L1Q9NZI6 479 aa11.78□□□□□ -0.52
HMG20A-208ENST00000559099 WASLO00401 505 aaPredicted RBP11.77□□□□□ -0.53
HMG20A-208ENST00000559099 RGL3Q3MIN7 710 aa11.77□□□□□ -0.53
HMG20A-208ENST00000559099 POGKQ9P215 609 aa11.77□□□□□ -0.53
HMG20A-208ENST00000559099 WDR17Q8IZU2 1322 aa11.77□□□□□ -0.53
HMG20A-208ENST00000559099 MINK1Q8N4C8 1332 aaPredicted RBP11.77□□□□□ -0.53
HMG20A-208ENST00000559099 POLR3AO14802 1390 aaPredicted RBP11.77□□□□□ -0.53
HMG20A-208ENST00000559099 PIK3C2AO00443 1686 aa11.76□□□□□ -0.53
HMG20A-208ENST00000559099 TNRC18O15417 2968 aaPredicted RBP11.76□□□□□ -0.53
HMG20A-208ENST00000559099 APLP2Q06481 763 aa11.76□□□□□ -0.53
HMG20A-208ENST00000559099 CFAP70Q5T0N1 1121 aa11.76□□□□□ -0.53
HMG20A-208ENST00000559099 MSL1Q68DK7 614 aa11.76□□□□□ -0.53
HMG20A-208ENST00000559099 IGSF1Q8N6C5 1336 aa11.76□□□□□ -0.53
HMG20A-208ENST00000559099 KCNQ4P56696 695 aa11.75□□□□□ -0.53
HMG20A-208ENST00000559099 ABTB2Q8N961 1025 aa11.75□□□□□ -0.53
HMG20A-208ENST00000559099 ADGRB1O14514 1584 aa11.75□□□□□ -0.53
HMG20A-208ENST00000559099 EXOC5O00471 708 aa11.74□□□□□ -0.53
HMG20A-208ENST00000559099 SLC27A3Q5K4L6 730 aa11.74□□□□□ -0.53
HMG20A-208ENST00000559099 COL23A1Q86Y22 540 aaPredicted RBP11.74□□□□□ -0.53
HMG20A-208ENST00000559099 AXIN2Q9Y2T1 843 aa11.74□□□□□ -0.53
HMG20A-208ENST00000559099 QRICH2Q9H0J4 1663 aa11.74□□□□□ -0.53
HMG20A-208ENST00000559099 RGPD5Q99666 1765 aa11.74□□□□□ -0.53
HMG20A-208ENST00000559099 LY75O60449 1722 aa11.73□□□□□ -0.53
HMG20A-208ENST00000559099 SLIT3O75094 1523 aa11.73□□□□□ -0.53
HMG20A-208ENST00000559099 ACEP12821 1306 aa11.72□□□□□ -0.53
HMG20A-208ENST00000559099 ZBTB7CA1YPR0 619 aa11.72□□□□□ -0.53
HMG20A-208ENST00000559099 NUDT16Q96DE0 195 aaKnown RBP11.72□□□□□ -0.53
HMG20A-208ENST00000559099 CARD10Q9BWT7 1032 aa11.72□□□□□ -0.53
HMG20A-208ENST00000559099 C10orf71Q711Q0 1435 aa11.71□□□□□ -0.53
HMG20A-208ENST00000559099 ITGAEP38570 1179 aa11.71□□□□□ -0.53
HMG20A-208ENST00000559099 PPIP5K1Q6PFW1 1433 aa11.7□□□□□ -0.54
HMG20A-208ENST00000559099 C16orf71Q8IYS4 520 aaPredicted RBP11.7□□□□□ -0.54
HMG20A-208ENST00000559099 PKD1L3Q7Z443 1732 aa11.69□□□□□ -0.54
HMG20A-208ENST00000559099 KIAA1551Q9HCM1 1747 aa11.69□□□□□ -0.54
HMG20A-208ENST00000559099 USP54Q70EL1 1684 aa11.69□□□□□ -0.54
HMG20A-208ENST00000559099 MSH5O43196 834 aa11.69□□□□□ -0.54
HMG20A-208ENST00000559099 MLLT1Q03111 559 aaPredicted RBP11.69□□□□□ -0.54
HMG20A-208ENST00000559099 NLRP13Q86W25 1043 aa11.69□□□□□ -0.54
HMG20A-208ENST00000559099 KCPQ6ZWJ8 1503 aa11.69□□□□□ -0.54
HMG20A-208ENST00000559099 CPSF1Q10570 1443 aaKnown RBP11.69□□□□□ -0.54
HMG20A-208ENST00000559099 TNRC6CQ9HCJ0 1690 aaKnown RBP11.68□□□□□ -0.54
HMG20A-208ENST00000559099 FOXN1O15353 648 aa11.68□□□□□ -0.54
HMG20A-208ENST00000559099 PRDM10Q9NQV6 1147 aa11.68□□□□□ -0.54
HMG20A-208ENST00000559099 TRAK1Q9UPV9 953 aa11.68□□□□□ -0.54
HMG20A-208ENST00000559099 PXDNLA1KZ92 1463 aa11.68□□□□□ -0.54
HMG20A-208ENST00000559099 ABHD8Q96I13 439 aa11.67□□□□□ -0.54
HMG20A-208ENST00000559099 KAT6BQ8WYB5 2073 aa11.67□□□□□ -0.54
HMG20A-208ENST00000559099 CCDC7Q96M83 1385 aa11.67□□□□□ -0.54
HMG20A-208ENST00000559099 RGS19P49795 217 aa11.66□□□□□ -0.54
HMG20A-208ENST00000559099 SMC1BQ8NDV3 1235 aa11.66□□□□□ -0.54
HMG20A-208ENST00000559099 PLEKHG3A1L390 1219 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms