RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 KIAA0232Q92628 1395 aa24.17■■□□□ 1.46
CLPX-203ENST00000558958 IL13P35225 146 aa24.17■■□□□ 1.46
CLPX-203ENST00000558958 JCADQ9P266 1359 aa24.17■■□□□ 1.46
CLPX-203ENST00000558958 NUDCQ9Y266 331 aa24.16■■□□□ 1.46
CLPX-203ENST00000558958 EIF4A2Q14240 407 aaKnown RBP24.15■■□□□ 1.46
CLPX-203ENST00000558958 ADAMTS8Q9UP79 889 aa24.15■■□□□ 1.46
CLPX-203ENST00000558958 AXIN2Q9Y2T1 843 aa24.13■■□□□ 1.45
CLPX-203ENST00000558958 ABCC6O95255 1503 aa24.13■■□□□ 1.45
CLPX-203ENST00000558958 PRDM11Q9NQV5 511 aa24.13■■□□□ 1.45
CLPX-203ENST00000558958 BLMP54132 1417 aaPredicted RBP24.12■■□□□ 1.45
CLPX-203ENST00000558958 COL18A1P39060 1754 aa24.12■■□□□ 1.45
CLPX-203ENST00000558958 CHRNA2Q15822 529 aa24.12■■□□□ 1.45
CLPX-203ENST00000558958 U2SURPO15042 1029 aaKnown RBP24.11■■□□□ 1.45
CLPX-203ENST00000558958 U2AF1L5P0DN76 240 aaPredicted RBP24.1■■□□□ 1.45
CLPX-203ENST00000558958 U2AF1Q01081 240 aaKnown RBP eCLIP24.1■■□□□ 1.45
CLPX-203ENST00000558958 FAM83GA6ND36 823 aa24.09■■□□□ 1.45
CLPX-203ENST00000558958 LTV1Q96GA3 475 aaPredicted RBP24.07■■□□□ 1.44
CLPX-203ENST00000558958 SPATA31A6Q5VVP1 1343 aa24.07■■□□□ 1.44
CLPX-203ENST00000558958 NUTM2BA6NNL0 878 aaPredicted RBP24.07■■□□□ 1.44
CLPX-203ENST00000558958 NUTM2EB1AL46 878 aaPredicted RBP24.07■■□□□ 1.44
CLPX-203ENST00000558958 NUTM2AQ8IVF1 878 aaPredicted RBP24.07■■□□□ 1.44
CLPX-203ENST00000558958 ANKRD24Q8TF21 1146 aa24.07■■□□□ 1.44
CLPX-203ENST00000558958 LMO7Q8WWI1 1683 aa24.06■■□□□ 1.44
CLPX-203ENST00000558958 ERBB3P21860 1342 aa24.06■■□□□ 1.44
CLPX-203ENST00000558958 RGPD1P0DJD0 1748 aa24.05■■□□□ 1.44
CLPX-203ENST00000558958 RGPD5Q99666 1765 aa24.05■■□□□ 1.44
CLPX-203ENST00000558958 EYA1Q99502 592 aa24.05■■□□□ 1.44
CLPX-203ENST00000558958 CAMTA1Q9Y6Y1 1673 aa24.04■■□□□ 1.44
CLPX-203ENST00000558958 ADAMTS2O95450 1211 aa24.04■■□□□ 1.44
CLPX-203ENST00000558958 FBXO41Q8TF61 875 aa24.04■■□□□ 1.44
CLPX-203ENST00000558958 IGSF1Q8N6C5 1336 aa24.04■■□□□ 1.44
CLPX-203ENST00000558958 FCHSD2O94868 740 aa24.03■■□□□ 1.44
CLPX-203ENST00000558958 COL14A1Q05707 1796 aaKnown RBP24.02■■□□□ 1.44
CLPX-203ENST00000558958 YTHDC1Q96MU7 727 aaKnown RBP24.02■■□□□ 1.44
CLPX-203ENST00000558958 HMOX1P09601 288 aa24.01■■□□□ 1.43
CLPX-203ENST00000558958 RSPH6AQ9H0K4 717 aa24.01■■□□□ 1.43
CLPX-203ENST00000558958 NBPF6Q5VWK0 638 aa24■■□□□ 1.43
CLPX-203ENST00000558958 SULT6B1Q6IMI4 303 aa24■■□□□ 1.43
CLPX-203ENST00000558958 NBPF4Q96M43 638 aa24■■□□□ 1.43
CLPX-203ENST00000558958 COL5A2P05997 1499 aaPredicted RBP24■■□□□ 1.43
CLPX-203ENST00000558958 AEBP1Q8IUX7 1158 aa24■■□□□ 1.43
CLPX-203ENST00000558958 CCDC146Q8IYE0 955 aa24■■□□□ 1.43
CLPX-203ENST00000558958 KDRP35968 1356 aa23.99■■□□□ 1.43
CLPX-203ENST00000558958 RUNDC1Q96C34 613 aa23.99■■□□□ 1.43
CLPX-203ENST00000558958 PLEKHF1Q96S99 279 aa23.99■■□□□ 1.43
CLPX-203ENST00000558958 PNNQ9H307 717 aaKnown RBP23.99■■□□□ 1.43
CLPX-203ENST00000558958 BTG4Q9NY30 223 aa23.98■■□□□ 1.43
CLPX-203ENST00000558958 LRP6O75581 1613 aa23.98■■□□□ 1.43
CLPX-203ENST00000558958 NCAPD2Q15021 1401 aa23.97■■□□□ 1.43
CLPX-203ENST00000558958 WDR17Q8IZU2 1322 aa23.96■■□□□ 1.43
CLPX-203ENST00000558958 CSB-PGBD3P0DP91 1061 aa23.96■■□□□ 1.43
CLPX-203ENST00000558958 PRKAR2BP31323 418 aa23.96■■□□□ 1.43
CLPX-203ENST00000558958 HNRNPUQ00839 825 aaKnown RBP eCLIP23.96■■□□□ 1.43
CLPX-203ENST00000558958 RGPD2P0DJD1 1756 aa23.95■■□□□ 1.43
CLPX-203ENST00000558958 NLRP2Q9NX02 1062 aa23.95■■□□□ 1.42
CLPX-203ENST00000558958 FAM208AQ9UK61 1670 aaKnown RBP23.95■■□□□ 1.42
CLPX-203ENST00000558958 EVA1CP58658 441 aa23.94■■□□□ 1.42
CLPX-203ENST00000558958 USHBP1Q8N6Y0 703 aa23.94■■□□□ 1.42
CLPX-203ENST00000558958 STRN4Q9NRL3 753 aa23.94■■□□□ 1.42
CLPX-203ENST00000558958 PLCH1Q4KWH8 1693 aa23.93■■□□□ 1.42
CLPX-203ENST00000558958 SLIT2O94813 1529 aa23.93■■□□□ 1.42
CLPX-203ENST00000558958 APAF1O14727 1248 aa23.92■■□□□ 1.42
CLPX-203ENST00000558958 MAPK8IP3Q9UPT6 1336 aa23.91■■□□□ 1.42
CLPX-203ENST00000558958 LARP1Q6PKG0 1096 aaKnown RBP23.91■■□□□ 1.42
CLPX-203ENST00000558958 TCP11L2Q8N4U5 519 aa23.91■■□□□ 1.42
CLPX-203ENST00000558958 PHACTR3Q96KR7 559 aa23.91■■□□□ 1.42
CLPX-203ENST00000558958 C8orf37Q96NL8 207 aa23.91■■□□□ 1.42
CLPX-203ENST00000558958 SENP3-EIF4A1A0A087X0R7 540 aa23.9■■□□□ 1.42
CLPX-203ENST00000558958 NEFMP07197 916 aa23.9■■□□□ 1.42
CLPX-203ENST00000558958 TOM1L2Q6ZVM7 507 aa23.9■■□□□ 1.42
CLPX-203ENST00000558958 NGLY1Q96IV0 654 aa23.9■■□□□ 1.42
CLPX-203ENST00000558958 CARD10Q9BWT7 1032 aa23.89■■□□□ 1.42
CLPX-203ENST00000558958 NWD2Q9ULI1 1742 aa23.89■■□□□ 1.41
CLPX-203ENST00000558958 FNBP4Q8N3X1 1017 aaPredicted RBP23.88■■□□□ 1.41
CLPX-203ENST00000558958 CRB1P82279 1406 aa23.88■■□□□ 1.41
CLPX-203ENST00000558958 NRAPQ86VF7 1730 aa23.88■■□□□ 1.41
CLPX-203ENST00000558958 MEX3CQ5U5Q3 659 aaKnown RBP23.87■■□□□ 1.41
CLPX-203ENST00000558958 TMPOP42166 694 aaKnown RBP23.86■■□□□ 1.41
CLPX-203ENST00000558958 NGEFQ8N5V2 710 aa23.86■■□□□ 1.41
CLPX-203ENST00000558958 ZBED9Q6R2W3 1325 aa23.86■■□□□ 1.41
CLPX-203ENST00000558958 BCL9LQ86UU0 1499 aa23.85■■□□□ 1.41
CLPX-203ENST00000558958 UNC5CLQ8IV45 518 aa23.85■■□□□ 1.41
CLPX-203ENST00000558958 NCBP3Q53F19 620 aaKnown RBP23.84■■□□□ 1.41
CLPX-203ENST00000558958 RRP7AQ9Y3A4 280 aaKnown RBP23.84■■□□□ 1.41
CLPX-203ENST00000558958 SALL2Q9Y467 1007 aaPredicted RBP23.84■■□□□ 1.41
CLPX-203ENST00000558958 NFE2L2Q16236 605 aa23.83■■□□□ 1.41
CLPX-203ENST00000558958 RAPGEF4Q8WZA2 1011 aa23.82■■□□□ 1.4
CLPX-203ENST00000558958 NEUROD2Q15784 382 aa23.81■■□□□ 1.4
CLPX-203ENST00000558958 MTHFSDQ2M296 383 aaKnown RBP23.81■■□□□ 1.4
CLPX-203ENST00000558958 PLEKHG2Q9H7P9 1386 aa23.81■■□□□ 1.4
CLPX-203ENST00000558958 MEGF6O75095 1541 aa23.8■■□□□ 1.4
CLPX-203ENST00000558958 TATP17735 454 aaPredicted RBP23.8■■□□□ 1.4
CLPX-203ENST00000558958 RIPK4P57078 832 aa23.8■■□□□ 1.4
CLPX-203ENST00000558958 GAS2L2Q8NHY3 880 aa23.8■■□□□ 1.4
CLPX-203ENST00000558958 PHF23Q9BUL5 403 aaPredicted RBP23.8■■□□□ 1.4
CLPX-203ENST00000558958 USP35Q9P2H5 1018 aa23.8■■□□□ 1.4
CLPX-203ENST00000558958 USP21Q9UK80 565 aa23.8■■□□□ 1.4
CLPX-203ENST00000558958 SPATA31A1Q5TZJ5 1347 aa23.79■■□□□ 1.4
CLPX-203ENST00000558958 CCDC27Q2M243 656 aa23.79■■□□□ 1.4
CLPX-203ENST00000558958 AMOTQ4VCS5 1084 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 454.9 ms