RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 TTC21AQ8NDW8 1320 aa7.93□□□□□ -1.14
SMAD3-209ENST00000558894 TONSLQ96HA7 1378 aa7.93□□□□□ -1.14
SMAD3-209ENST00000558894 SHANK3Q9BYB0 1731 aa7.92□□□□□ -1.14
SMAD3-209ENST00000558894 A0A0G2JS52 829 aa7.92□□□□□ -1.14
SMAD3-209ENST00000558894 EVA1CP58658 441 aa7.92□□□□□ -1.14
SMAD3-209ENST00000558894 MYT1Q01538 1121 aa7.92□□□□□ -1.14
SMAD3-209ENST00000558894 TRIM26Q12899 539 aaPredicted RBP7.92□□□□□ -1.14
SMAD3-209ENST00000558894 THRAP3Q9Y2W1 955 aaKnown RBP7.92□□□□□ -1.14
SMAD3-209ENST00000558894 A0A1W2PP64 1363 aa7.92□□□□□ -1.14
SMAD3-209ENST00000558894 OVOS2A0A0J9YW53 1432 aa7.92□□□□□ -1.14
SMAD3-209ENST00000558894 OVOS2Q6IE36 1432 aa7.92□□□□□ -1.14
SMAD3-209ENST00000558894 TRIM37O94972 964 aa7.91□□□□□ -1.14
SMAD3-209ENST00000558894 BAG6P46379 1132 aa7.91□□□□□ -1.14
SMAD3-209ENST00000558894 EZH2Q15910 746 aaKnown RBP7.91□□□□□ -1.14
SMAD3-209ENST00000558894 FAM196AQ6ZSG2 479 aa7.91□□□□□ -1.14
SMAD3-209ENST00000558894 PUS7Q96PZ0 661 aaKnown RBP7.91□□□□□ -1.14
SMAD3-209ENST00000558894 SLC12A5Q9H2X9 1139 aa7.91□□□□□ -1.14
SMAD3-209ENST00000558894 WDR17Q8IZU2 1322 aa7.91□□□□□ -1.14
SMAD3-209ENST00000558894 FAM208AQ9UK61 1670 aaKnown RBP7.91□□□□□ -1.14
SMAD3-209ENST00000558894 KIF20BQ96Q89 1820 aa7.91□□□□□ -1.14
SMAD3-209ENST00000558894 CASZ1Q86V15 1759 aa7.9□□□□□ -1.14
SMAD3-209ENST00000558894 NHSQ6T4R5 1651 aa7.9□□□□□ -1.14
SMAD3-209ENST00000558894 BCL9O00512 1426 aa7.9□□□□□ -1.14
SMAD3-209ENST00000558894 EDC4Q6P2E9 1401 aaKnown RBP7.9□□□□□ -1.14
SMAD3-209ENST00000558894 SF3B2Q13435 895 aaKnown RBP7.9□□□□□ -1.14
SMAD3-209ENST00000558894 PTF1AQ7RTS3 328 aa7.9□□□□□ -1.14
SMAD3-209ENST00000558894 NME9Q86XW9 330 aa7.9□□□□□ -1.14
SMAD3-209ENST00000558894 KCNH5Q8NCM2 988 aa7.9□□□□□ -1.14
SMAD3-209ENST00000558894 PARD3Q8TEW0 1356 aa7.89□□□□□ -1.15
SMAD3-209ENST00000558894 ST20-MTHFSA0A0A6YYL1 179 aa7.89□□□□□ -1.15
SMAD3-209ENST00000558894 PSDA5PKW4 1024 aaPredicted RBP7.89□□□□□ -1.15
SMAD3-209ENST00000558894 OVOS2A0A0G2JMS6 1433 aa7.88□□□□□ -1.15
SMAD3-209ENST00000558894 BTAF1O14981 1849 aa7.88□□□□□ -1.15
SMAD3-209ENST00000558894 ZBTB7CA1YPR0 619 aa7.88□□□□□ -1.15
SMAD3-209ENST00000558894 APBA3O96018 575 aa7.88□□□□□ -1.15
SMAD3-209ENST00000558894 PDE3BQ13370 1112 aa7.88□□□□□ -1.15
SMAD3-209ENST00000558894 TOM1L2Q6ZVM7 507 aa7.88□□□□□ -1.15
SMAD3-209ENST00000558894 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.88□□□□□ -1.15
SMAD3-209ENST00000558894 MARCH10Q8NA82 808 aaPredicted RBP7.88□□□□□ -1.15
SMAD3-209ENST00000558894 CARD10Q9BWT7 1032 aa7.88□□□□□ -1.15
SMAD3-209ENST00000558894 ANKRD26Q9UPS8 1709 aa7.87□□□□□ -1.15
SMAD3-209ENST00000558894 ERBB3P21860 1342 aa7.87□□□□□ -1.15
SMAD3-209ENST00000558894 SOX12O15370 315 aa7.87□□□□□ -1.15
SMAD3-209ENST00000558894 R3HDM1Q15032 1099 aaKnown RBP7.87□□□□□ -1.15
SMAD3-209ENST00000558894 PAPPAQ13219 1627 aa7.87□□□□□ -1.15
SMAD3-209ENST00000558894 NINLQ9Y2I6 1382 aa7.86□□□□□ -1.15
SMAD3-209ENST00000558894 DDB1Q16531 1140 aa7.86□□□□□ -1.15
SMAD3-209ENST00000558894 PROM2Q8N271 834 aa7.86□□□□□ -1.15
SMAD3-209ENST00000558894 TMC1Q8TDI8 760 aa7.86□□□□□ -1.15
SMAD3-209ENST00000558894 TNS2Q63HR2 1409 aa7.86□□□□□ -1.15
SMAD3-209ENST00000558894 USP47Q96K76 1375 aa7.85□□□□□ -1.15
SMAD3-209ENST00000558894 CCDC7Q96M83 1385 aa7.85□□□□□ -1.15
SMAD3-209ENST00000558894 PLSCR1O15162 318 aa7.85□□□□□ -1.15
SMAD3-209ENST00000558894 FBLN1P23142 703 aa7.85□□□□□ -1.15
SMAD3-209ENST00000558894 HDGFL2Q7Z4V5 671 aaPredicted RBP7.85□□□□□ -1.15
SMAD3-209ENST00000558894 CDCA7Q9BWT1 371 aaPredicted RBP7.85□□□□□ -1.15
SMAD3-209ENST00000558894 TERF2IPQ9NYB0 399 aa7.85□□□□□ -1.15
SMAD3-209ENST00000558894 LY75O60449 1722 aa7.85□□□□□ -1.15
SMAD3-209ENST00000558894 COL24A1Q17RW2 1714 aa7.85□□□□□ -1.15
SMAD3-209ENST00000558894 DOT1LQ8TEK3 1739 aa7.85□□□□□ -1.15
SMAD3-209ENST00000558894 MAP2P11137 1827 aaKnown RBP7.85□□□□□ -1.15
SMAD3-209ENST00000558894 TUBGCP6Q96RT7 1819 aa7.85□□□□□ -1.15
SMAD3-209ENST00000558894 ANKRD36BQ8N2N9 1353 aa7.84□□□□□ -1.15
SMAD3-209ENST00000558894 QSER1Q2KHR3 1735 aa7.84□□□□□ -1.15
SMAD3-209ENST00000558894 C11orf95C9JLR9 678 aaPredicted RBP7.84□□□□□ -1.15
SMAD3-209ENST00000558894 BCL11BQ9C0K0 894 aaPredicted RBP7.84□□□□□ -1.15
SMAD3-209ENST00000558894 FYB1O15117 783 aa7.83□□□□□ -1.16
SMAD3-209ENST00000558894 SLC34A2O95436 690 aa7.83□□□□□ -1.16
SMAD3-209ENST00000558894 ANKRD24Q8TF21 1146 aa7.83□□□□□ -1.16
SMAD3-209ENST00000558894 IP6K1Q92551 441 aa7.83□□□□□ -1.16
SMAD3-209ENST00000558894 MAP3K19Q56UN5 1328 aa7.82□□□□□ -1.16
SMAD3-209ENST00000558894 EXOC5O00471 708 aa7.82□□□□□ -1.16
SMAD3-209ENST00000558894 KCNQ2O43526 872 aa7.82□□□□□ -1.16
SMAD3-209ENST00000558894 CSB-PGBD3P0DP91 1061 aa7.82□□□□□ -1.16
SMAD3-209ENST00000558894 YY1P25490 414 aa7.82□□□□□ -1.16
SMAD3-209ENST00000558894 PKD1L3Q7Z443 1732 aa7.82□□□□□ -1.16
SMAD3-209ENST00000558894 CARD14Q9BXL6 1004 aa7.82□□□□□ -1.16
SMAD3-209ENST00000558894 PDGFDQ9GZP0 370 aaPredicted RBP7.82□□□□□ -1.16
SMAD3-209ENST00000558894 ANO8Q9HCE9 1232 aaPredicted RBP7.82□□□□□ -1.16
SMAD3-209ENST00000558894 TIMELESSQ9UNS1 1208 aa7.82□□□□□ -1.16
SMAD3-209ENST00000558894 TOGARAM1Q9Y4F4 1720 aa7.82□□□□□ -1.16
SMAD3-209ENST00000558894 ITGB4P16144 1822 aa7.82□□□□□ -1.16
SMAD3-209ENST00000558894 SLC24A1O60721 1099 aa7.81□□□□□ -1.16
SMAD3-209ENST00000558894 IL2RBP14784 551 aa7.81□□□□□ -1.16
SMAD3-209ENST00000558894 HOXC9P31274 260 aa7.81□□□□□ -1.16
SMAD3-209ENST00000558894 MEGF6O75095 1541 aa7.81□□□□□ -1.16
SMAD3-209ENST00000558894 CLSPNQ9HAW4 1339 aa7.8□□□□□ -1.16
SMAD3-209ENST00000558894 TAF1LQ8IZX4 1826 aa7.8□□□□□ -1.16
SMAD3-209ENST00000558894 KAT6BQ8WYB5 2073 aa7.8□□□□□ -1.16
SMAD3-209ENST00000558894 TMF1P82094 1093 aa7.8□□□□□ -1.16
SMAD3-209ENST00000558894 NLRP2Q9NX02 1062 aa7.8□□□□□ -1.16
SMAD3-209ENST00000558894 RTL1A6NKG5 1358 aa7.8□□□□□ -1.16
SMAD3-209ENST00000558894 NSD2O96028 1365 aa7.8□□□□□ -1.16
SMAD3-209ENST00000558894 SENP3-EIF4A1A0A087X0R7 540 aa7.79□□□□□ -1.16
SMAD3-209ENST00000558894 TXNRD1Q16881 649 aa7.79□□□□□ -1.16
SMAD3-209ENST00000558894 COG3Q96JB2 828 aa7.79□□□□□ -1.16
SMAD3-209ENST00000558894 GGNBP2Q9H3C7 697 aa7.79□□□□□ -1.16
SMAD3-209ENST00000558894 NCAPD2Q15021 1401 aa7.78□□□□□ -1.16
SMAD3-209ENST00000558894 UTRNP46939 3433 aa7.78□□□□□ -1.16
SMAD3-209ENST00000558894 RRS1Q15050 365 aaKnown RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms