RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 WDR17Q8IZU2 1322 aa22.97■■□□□ 1.27
CDC42BPB-203ENST00000558867 CSB-PGBD3P0DP91 1061 aa22.96■■□□□ 1.27
CDC42BPB-203ENST00000558867 SLIT3O75094 1523 aa22.96■■□□□ 1.27
CDC42BPB-203ENST00000558867 PEAK1Q9H792 1746 aa22.94■■□□□ 1.26
CDC42BPB-203ENST00000558867 QRICH2Q9H0J4 1663 aa22.93■■□□□ 1.26
CDC42BPB-203ENST00000558867 LRRC37A3O60309 1634 aa22.93■■□□□ 1.26
CDC42BPB-203ENST00000558867 SBF2Q86WG5 1849 aa22.92■■□□□ 1.26
CDC42BPB-203ENST00000558867 EXOC5O00471 708 aa22.92■■□□□ 1.26
CDC42BPB-203ENST00000558867 CARD10Q9BWT7 1032 aa22.92■■□□□ 1.26
CDC42BPB-203ENST00000558867 STK32BQ9NY57 414 aa22.92■■□□□ 1.26
CDC42BPB-203ENST00000558867 BCL9O00512 1426 aa22.91■■□□□ 1.26
CDC42BPB-203ENST00000558867 ARHGEF25Q86VW2 580 aa22.91■■□□□ 1.26
CDC42BPB-203ENST00000558867 CPSF1Q10570 1443 aaKnown RBP22.91■■□□□ 1.26
CDC42BPB-203ENST00000558867 TTC21AQ8NDW8 1320 aa22.9■■□□□ 1.26
CDC42BPB-203ENST00000558867 MARCH10Q8NA82 808 aaPredicted RBP22.9■■□□□ 1.26
CDC42BPB-203ENST00000558867 AXIN2Q9Y2T1 843 aa22.9■■□□□ 1.26
CDC42BPB-203ENST00000558867 ANO8Q9HCE9 1232 aaPredicted RBP22.89■■□□□ 1.25
CDC42BPB-203ENST00000558867 TTC21BQ7Z4L5 1316 aa22.88■■□□□ 1.25
CDC42BPB-203ENST00000558867 AKAP12Q02952 1782 aa22.88■■□□□ 1.25
CDC42BPB-203ENST00000558867 SOX12O15370 315 aa22.87■■□□□ 1.25
CDC42BPB-203ENST00000558867 ZBTB7AO95365 584 aa22.87■■□□□ 1.25
CDC42BPB-203ENST00000558867 TXNRD1Q16881 649 aa22.87■■□□□ 1.25
CDC42BPB-203ENST00000558867 CCDC7Q96M83 1385 aa22.87■■□□□ 1.25
CDC42BPB-203ENST00000558867 PIK3C2AO00443 1686 aa22.87■■□□□ 1.25
CDC42BPB-203ENST00000558867 COL18A1P39060 1754 aa22.86■■□□□ 1.25
CDC42BPB-203ENST00000558867 PROM2Q8N271 834 aa22.85■■□□□ 1.25
CDC42BPB-203ENST00000558867 TRPM1Q7Z4N2 1603 aa22.85■■□□□ 1.25
CDC42BPB-203ENST00000558867 WNK3Q9BYP7 1800 aa22.85■■□□□ 1.25
CDC42BPB-203ENST00000558867 SLC15A2Q16348 729 aa22.84■■□□□ 1.25
CDC42BPB-203ENST00000558867 PTF1AQ7RTS3 328 aa22.84■■□□□ 1.25
CDC42BPB-203ENST00000558867 CASZ1Q86V15 1759 aa22.84■■□□□ 1.25
CDC42BPB-203ENST00000558867 ATF5Q9Y2D1 282 aaPredicted RBP22.83■■□□□ 1.25
CDC42BPB-203ENST00000558867 KTN1Q86UP2 1357 aaKnown RBP22.82■■□□□ 1.24
CDC42BPB-203ENST00000558867 L3MBTL2Q969R5 705 aa22.82■■□□□ 1.24
CDC42BPB-203ENST00000558867 MTFR1LQ9H019 292 aa22.82■■□□□ 1.24
CDC42BPB-203ENST00000558867 ROCK2O75116 1388 aaKnown RBP22.8■■□□□ 1.24
CDC42BPB-203ENST00000558867 ABCC6O95255 1503 aa22.79■■□□□ 1.24
CDC42BPB-203ENST00000558867 PTGER2P43116 358 aa22.79■■□□□ 1.24
CDC42BPB-203ENST00000558867 PDGFDQ9GZP0 370 aaPredicted RBP22.79■■□□□ 1.24
CDC42BPB-203ENST00000558867 TNS2Q63HR2 1409 aa22.78■■□□□ 1.24
CDC42BPB-203ENST00000558867 RGPD5Q99666 1765 aa22.78■■□□□ 1.24
CDC42BPB-203ENST00000558867 SYT17Q9BSW7 474 aa22.77■■□□□ 1.24
CDC42BPB-203ENST00000558867 NLRP2Q9NX02 1062 aa22.77■■□□□ 1.24
CDC42BPB-203ENST00000558867 ZEB1P37275 1124 aaPredicted RBP22.76■■□□□ 1.23
CDC42BPB-203ENST00000558867 FHDC1Q9C0D6 1143 aaPredicted RBP22.76■■□□□ 1.23
CDC42BPB-203ENST00000558867 IL2RBP14784 551 aa22.75■■□□□ 1.23
CDC42BPB-203ENST00000558867 MYOM1P52179 1685 aa22.74■■□□□ 1.23
CDC42BPB-203ENST00000558867 NFAT5O94916 1531 aa22.74■■□□□ 1.23
CDC42BPB-203ENST00000558867 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.74■■□□□ 1.23
CDC42BPB-203ENST00000558867 ACSBG1Q96GR2 724 aa22.73■■□□□ 1.23
CDC42BPB-203ENST00000558867 ARXQ96QS3 562 aa22.73■■□□□ 1.23
CDC42BPB-203ENST00000558867 ERBB3P21860 1342 aa22.73■■□□□ 1.23
CDC42BPB-203ENST00000558867 HDGFL2Q7Z4V5 671 aaPredicted RBP22.72■■□□□ 1.23
CDC42BPB-203ENST00000558867 ZNF784Q8NCA9 323 aaPredicted RBP22.72■■□□□ 1.23
CDC42BPB-203ENST00000558867 USP31Q70CQ4 1352 aa22.72■■□□□ 1.23
CDC42BPB-203ENST00000558867 NHSQ6T4R5 1651 aa22.71■■□□□ 1.23
CDC42BPB-203ENST00000558867 NEUROD1Q13562 356 aa22.69■■□□□ 1.22
CDC42BPB-203ENST00000558867 TMC1Q8TDI8 760 aa22.69■■□□□ 1.22
CDC42BPB-203ENST00000558867 ANKRD24Q8TF21 1146 aa22.68■■□□□ 1.22
CDC42BPB-203ENST00000558867 SGIP1Q9BQI5 828 aa22.68■■□□□ 1.22
CDC42BPB-203ENST00000558867 KAT6BQ8WYB5 2073 aa22.67■■□□□ 1.22
CDC42BPB-203ENST00000558867 SBNO2Q9Y2G9 1366 aa22.66■■□□□ 1.22
CDC42BPB-203ENST00000558867 MON2Q7Z3U7 1717 aa22.66■■□□□ 1.22
CDC42BPB-203ENST00000558867 SLC16A10Q8TF71 515 aa22.66■■□□□ 1.22
CDC42BPB-203ENST00000558867 SIN3AQ96ST3 1273 aa22.66■■□□□ 1.22
CDC42BPB-203ENST00000558867 TERF2IPQ9NYB0 399 aa22.66■■□□□ 1.22
CDC42BPB-203ENST00000558867 MAP3K5Q99683 1374 aa22.65■■□□□ 1.22
CDC42BPB-203ENST00000558867 POLD1P28340 1107 aa22.65■■□□□ 1.22
CDC42BPB-203ENST00000558867 SLC27A3Q5K4L6 730 aa22.65■■□□□ 1.22
CDC42BPB-203ENST00000558867 NME9Q86XW9 330 aa22.65■■□□□ 1.22
CDC42BPB-203ENST00000558867 CHD4Q14839 1912 aa22.65■■□□□ 1.22
CDC42BPB-203ENST00000558867 GPR162Q16538 588 aa22.64■■□□□ 1.21
CDC42BPB-203ENST00000558867 CARD11Q9BXL7 1154 aa22.62■■□□□ 1.21
CDC42BPB-203ENST00000558867 USP54Q70EL1 1684 aa22.62■■□□□ 1.21
CDC42BPB-203ENST00000558867 BTAF1O14981 1849 aa22.61■■□□□ 1.21
CDC42BPB-203ENST00000558867 LTN1O94822 1766 aa22.61■■□□□ 1.21
CDC42BPB-203ENST00000558867 EDC4Q6P2E9 1401 aaKnown RBP22.61■■□□□ 1.21
CDC42BPB-203ENST00000558867 DDX54Q8TDD1 881 aaKnown RBP22.61■■□□□ 1.21
CDC42BPB-203ENST00000558867 UTRNP46939 3433 aa22.61■■□□□ 1.21
CDC42BPB-203ENST00000558867 ZNF827Q17R98 1081 aa22.59■■□□□ 1.21
CDC42BPB-203ENST00000558867 KLHL34Q8N239 644 aa22.59■■□□□ 1.21
CDC42BPB-203ENST00000558867 IP6K1Q92551 441 aa22.59■■□□□ 1.21
CDC42BPB-203ENST00000558867 PAPPAQ13219 1627 aa22.59■■□□□ 1.21
CDC42BPB-203ENST00000558867 SENP3-EIF4A1A0A087X0R7 540 aa22.58■■□□□ 1.21
CDC42BPB-203ENST00000558867 PUS7Q96PZ0 661 aaKnown RBP22.58■■□□□ 1.21
CDC42BPB-203ENST00000558867 SLC12A5Q9H2X9 1139 aa22.58■■□□□ 1.21
CDC42BPB-203ENST00000558867 LRRC4BQ9NT99 713 aa22.58■■□□□ 1.21
CDC42BPB-203ENST00000558867 TFCP2L1Q9NZI6 479 aa22.58■■□□□ 1.21
CDC42BPB-203ENST00000558867 C1QTNF8P60827 252 aa22.57■■□□□ 1.2
CDC42BPB-203ENST00000558867 AKT1S1Q96B36 256 aa22.57■■□□□ 1.2
CDC42BPB-203ENST00000558867 SYTL4Q96C24 671 aaPredicted RBP22.57■■□□□ 1.2
CDC42BPB-203ENST00000558867 CD163L1Q9NR16 1453 aa22.56■■□□□ 1.2
CDC42BPB-203ENST00000558867 HMGB2P26583 209 aaKnown RBP22.56■■□□□ 1.2
CDC42BPB-203ENST00000558867 SLC24A1O60721 1099 aa22.55■■□□□ 1.2
CDC42BPB-203ENST00000558867 CCER1Q8TC90 406 aaPredicted RBP22.55■■□□□ 1.2
CDC42BPB-203ENST00000558867 LTV1Q96GA3 475 aaPredicted RBP22.55■■□□□ 1.2
CDC42BPB-203ENST00000558867 PELP1Q8IZL8 1130 aaKnown RBP22.54■■□□□ 1.2
CDC42BPB-203ENST00000558867 COG3Q96JB2 828 aa22.54■■□□□ 1.2
CDC42BPB-203ENST00000558867 FAM208AQ9UK61 1670 aaKnown RBP22.53■■□□□ 1.2
CDC42BPB-203ENST00000558867 AMPHP49418 695 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms