RNA–Protein interactions for RNA: ENST00000558795.1

CPNE6-208, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 1,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-208ENST00000558795 TRIM26Q12899 539 aaPredicted RBP22.06■■□□□ 1.12
CPNE6-208ENST00000558795 WDR17Q8IZU2 1322 aa22.06■■□□□ 1.12
CPNE6-208ENST00000558795 COL18A1P39060 1754 aa22.05■■□□□ 1.12
CPNE6-208ENST00000558795 AKAP12Q02952 1782 aa22.05■■□□□ 1.12
CPNE6-208ENST00000558795 BCL11BQ9C0K0 894 aaPredicted RBP22.05■■□□□ 1.12
CPNE6-208ENST00000558795 EVC2Q86UK5 1308 aa22.05■■□□□ 1.12
CPNE6-208ENST00000558795 CDCA7Q9BWT1 371 aaPredicted RBP22.04■■□□□ 1.12
CPNE6-208ENST00000558795 CPSF1Q10570 1443 aaKnown RBP22.04■■□□□ 1.12
CPNE6-208ENST00000558795 ANO8Q9HCE9 1232 aaPredicted RBP22.03■■□□□ 1.12
CPNE6-208ENST00000558795 CSB-PGBD3P0DP91 1061 aa22.02■■□□□ 1.12
CPNE6-208ENST00000558795 KCNH5Q8NCM2 988 aa22.02■■□□□ 1.12
CPNE6-208ENST00000558795 AXIN2Q9Y2T1 843 aa22.02■■□□□ 1.12
CPNE6-208ENST00000558795 TRPM1Q7Z4N2 1603 aa22.02■■□□□ 1.11
CPNE6-208ENST00000558795 SOX12O15370 315 aa22.01■■□□□ 1.11
CPNE6-208ENST00000558795 PTF1AQ7RTS3 328 aa22.01■■□□□ 1.11
CPNE6-208ENST00000558795 MARCH10Q8NA82 808 aaPredicted RBP22.01■■□□□ 1.11
CPNE6-208ENST00000558795 ZNF692Q9BU19 519 aaPredicted RBP22.01■■□□□ 1.11
CPNE6-208ENST00000558795 CASZ1Q86V15 1759 aa22■■□□□ 1.11
CPNE6-208ENST00000558795 RGPD5Q99666 1765 aa22■■□□□ 1.11
CPNE6-208ENST00000558795 ARHGEF25Q86VW2 580 aa21.99■■□□□ 1.11
CPNE6-208ENST00000558795 TTC21BQ7Z4L5 1316 aa21.99■■□□□ 1.11
CPNE6-208ENST00000558795 BCL9O00512 1426 aa21.98■■□□□ 1.11
CPNE6-208ENST00000558795 CARD10Q9BWT7 1032 aa21.98■■□□□ 1.11
CPNE6-208ENST00000558795 L3MBTL2Q969R5 705 aa21.97■■□□□ 1.11
CPNE6-208ENST00000558795 TTC21AQ8NDW8 1320 aa21.97■■□□□ 1.11
CPNE6-208ENST00000558795 EXOC5O00471 708 aa21.95■■□□□ 1.1
CPNE6-208ENST00000558795 ZBTB7AO95365 584 aa21.95■■□□□ 1.1
CPNE6-208ENST00000558795 PROM2Q8N271 834 aa21.95■■□□□ 1.1
CPNE6-208ENST00000558795 STK32BQ9NY57 414 aa21.95■■□□□ 1.1
CPNE6-208ENST00000558795 TXNRD1Q16881 649 aa21.94■■□□□ 1.1
CPNE6-208ENST00000558795 PDGFDQ9GZP0 370 aaPredicted RBP21.94■■□□□ 1.1
CPNE6-208ENST00000558795 ROCK2O75116 1388 aaKnown RBP21.94■■□□□ 1.1
CPNE6-208ENST00000558795 CCDC7Q96M83 1385 aa21.94■■□□□ 1.1
CPNE6-208ENST00000558795 KTN1Q86UP2 1357 aaKnown RBP21.93■■□□□ 1.1
CPNE6-208ENST00000558795 MYOM1P52179 1685 aa21.92■■□□□ 1.1
CPNE6-208ENST00000558795 NFAT5O94916 1531 aa21.92■■□□□ 1.1
CPNE6-208ENST00000558795 ABCC6O95255 1503 aa21.91■■□□□ 1.1
CPNE6-208ENST00000558795 ATF5Q9Y2D1 282 aaPredicted RBP21.91■■□□□ 1.1
CPNE6-208ENST00000558795 TNS2Q63HR2 1409 aa21.9■■□□□ 1.1
CPNE6-208ENST00000558795 SLC15A2Q16348 729 aa21.9■■□□□ 1.1
CPNE6-208ENST00000558795 PTGER2P43116 358 aa21.88■■□□□ 1.09
CPNE6-208ENST00000558795 MON2Q7Z3U7 1717 aa21.88■■□□□ 1.09
CPNE6-208ENST00000558795 NHSQ6T4R5 1651 aa21.88■■□□□ 1.09
CPNE6-208ENST00000558795 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.86■■□□□ 1.09
CPNE6-208ENST00000558795 NLRP2Q9NX02 1062 aa21.86■■□□□ 1.09
CPNE6-208ENST00000558795 ACSBG1Q96GR2 724 aa21.85■■□□□ 1.09
CPNE6-208ENST00000558795 SIN3AQ96ST3 1273 aa21.85■■□□□ 1.09
CPNE6-208ENST00000558795 MTFR1LQ9H019 292 aa21.85■■□□□ 1.09
CPNE6-208ENST00000558795 NEUROD1Q13562 356 aa21.84■■□□□ 1.09
CPNE6-208ENST00000558795 LTN1O94822 1766 aa21.84■■□□□ 1.09
CPNE6-208ENST00000558795 ERBB3P21860 1342 aa21.83■■□□□ 1.09
CPNE6-208ENST00000558795 SYT17Q9BSW7 474 aa21.83■■□□□ 1.09
CPNE6-208ENST00000558795 FHDC1Q9C0D6 1143 aaPredicted RBP21.83■■□□□ 1.09
CPNE6-208ENST00000558795 USP31Q70CQ4 1352 aa21.83■■□□□ 1.08
CPNE6-208ENST00000558795 USP54Q70EL1 1684 aa21.82■■□□□ 1.08
CPNE6-208ENST00000558795 IL2RBP14784 551 aa21.82■■□□□ 1.08
CPNE6-208ENST00000558795 KAT6BQ8WYB5 2073 aa21.81■■□□□ 1.08
CPNE6-208ENST00000558795 NME9Q86XW9 330 aa21.8■■□□□ 1.08
CPNE6-208ENST00000558795 TMC1Q8TDI8 760 aa21.8■■□□□ 1.08
CPNE6-208ENST00000558795 BTAF1O14981 1849 aa21.8■■□□□ 1.08
CPNE6-208ENST00000558795 SBNO2Q9Y2G9 1366 aa21.78■■□□□ 1.08
CPNE6-208ENST00000558795 HDGFL2Q7Z4V5 671 aaPredicted RBP21.78■■□□□ 1.08
CPNE6-208ENST00000558795 ANKRD24Q8TF21 1146 aa21.78■■□□□ 1.08
CPNE6-208ENST00000558795 ARXQ96QS3 562 aa21.78■■□□□ 1.08
CPNE6-208ENST00000558795 SGIP1Q9BQI5 828 aa21.78■■□□□ 1.08
CPNE6-208ENST00000558795 PCGF6Q9BYE7 350 aa21.78■■□□□ 1.08
CPNE6-208ENST00000558795 PAPPAQ13219 1627 aa21.77■■□□□ 1.08
CPNE6-208ENST00000558795 ZNF784Q8NCA9 323 aaPredicted RBP21.77■■□□□ 1.08
CPNE6-208ENST00000558795 CD163L1Q9NR16 1453 aa21.77■■□□□ 1.07
CPNE6-208ENST00000558795 CHD4Q14839 1912 aa21.76■■□□□ 1.07
CPNE6-208ENST00000558795 EDC4Q6P2E9 1401 aaKnown RBP21.74■■□□□ 1.07
CPNE6-208ENST00000558795 CARD11Q9BXL7 1154 aa21.74■■□□□ 1.07
CPNE6-208ENST00000558795 ZNF827Q17R98 1081 aa21.73■■□□□ 1.07
CPNE6-208ENST00000558795 TERF2IPQ9NYB0 399 aa21.73■■□□□ 1.07
CPNE6-208ENST00000558795 SLC12A5Q9H2X9 1139 aa21.72■■□□□ 1.07
CPNE6-208ENST00000558795 DDX54Q8TDD1 881 aaKnown RBP21.71■■□□□ 1.07
CPNE6-208ENST00000558795 FAM208AQ9UK61 1670 aaKnown RBP21.71■■□□□ 1.07
CPNE6-208ENST00000558795 MAP3K5Q99683 1374 aa21.71■■□□□ 1.07
CPNE6-208ENST00000558795 LRRC4BQ9NT99 713 aa21.7■■□□□ 1.06
CPNE6-208ENST00000558795 SLC27A3Q5K4L6 730 aa21.69■■□□□ 1.06
CPNE6-208ENST00000558795 LTV1Q96GA3 475 aaPredicted RBP21.69■■□□□ 1.06
CPNE6-208ENST00000558795 A0A1W2PP64 1363 aa21.69■■□□□ 1.06
CPNE6-208ENST00000558795 KLHL34Q8N239 644 aa21.68■■□□□ 1.06
CPNE6-208ENST00000558795 SLC16A10Q8TF71 515 aa21.68■■□□□ 1.06
CPNE6-208ENST00000558795 IP6K1Q92551 441 aa21.68■■□□□ 1.06
CPNE6-208ENST00000558795 QSER1Q2KHR3 1735 aa21.67■■□□□ 1.06
CPNE6-208ENST00000558795 POLD1P28340 1107 aa21.67■■□□□ 1.06
CPNE6-208ENST00000558795 GPR162Q16538 588 aa21.67■■□□□ 1.06
CPNE6-208ENST00000558795 AKT1S1Q96B36 256 aa21.67■■□□□ 1.06
CPNE6-208ENST00000558795 SYTL4Q96C24 671 aaPredicted RBP21.66■■□□□ 1.06
CPNE6-208ENST00000558795 PUS7Q96PZ0 661 aaKnown RBP21.64■■□□□ 1.05
CPNE6-208ENST00000558795 TFCP2L1Q9NZI6 479 aa21.64■■□□□ 1.05
CPNE6-208ENST00000558795 DOT1LQ8TEK3 1739 aa21.63■■□□□ 1.05
CPNE6-208ENST00000558795 PNPLA7Q6ZV29 1317 aa21.62■■□□□ 1.05
CPNE6-208ENST00000558795 SENP3-EIF4A1A0A087X0R7 540 aa21.62■■□□□ 1.05
CPNE6-208ENST00000558795 AMPHP49418 695 aa21.62■■□□□ 1.05
CPNE6-208ENST00000558795 PRIM1P49642 420 aaKnown RBP21.62■■□□□ 1.05
CPNE6-208ENST00000558795 PELP1Q8IZL8 1130 aaKnown RBP21.62■■□□□ 1.05
CPNE6-208ENST00000558795 COG3Q96JB2 828 aa21.62■■□□□ 1.05
CPNE6-208ENST00000558795 ANKRD36BQ8N2N9 1353 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms