RNA–Protein interactions for RNA: ENST00000558685.1

SHF-204, Transcript of Src homology 2 domain containing F, humanhuman

TSL 4

Gene SHF, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-204ENST00000558685 FYB1O15117 783 aa16.37■□□□□ 0.21
SHF-204ENST00000558685 USP35Q9P2H5 1018 aa16.37■□□□□ 0.21
SHF-204ENST00000558685 EP400Q96L91 3159 aa16.37■□□□□ 0.21
SHF-204ENST00000558685 FBLN1P23142 703 aa16.36■□□□□ 0.21
SHF-204ENST00000558685 THSD7AQ9UPZ6 1657 aa16.36■□□□□ 0.21
SHF-204ENST00000558685 BARGINQ6ZT62 677 aa16.35■□□□□ 0.21
SHF-204ENST00000558685 KRT27Q7Z3Y8 459 aa16.35■□□□□ 0.21
SHF-204ENST00000558685 TCP11L2Q8N4U5 519 aa16.34■□□□□ 0.21
SHF-204ENST00000558685 GGNBP2Q9H3C7 697 aa16.34■□□□□ 0.21
SHF-204ENST00000558685 A0A0G2JS52 829 aa16.33■□□□□ 0.2
SHF-204ENST00000558685 MYT1Q01538 1121 aa16.33■□□□□ 0.2
SHF-204ENST00000558685 COG3Q96JB2 828 aa16.33■□□□□ 0.2
SHF-204ENST00000558685 WDR17Q8IZU2 1322 aa16.33■□□□□ 0.2
SHF-204ENST00000558685 CRB1P82279 1406 aa16.33■□□□□ 0.2
SHF-204ENST00000558685 RGPD5Q99666 1765 aa16.33■□□□□ 0.2
SHF-204ENST00000558685 FAM182BQ5T319 152 aa16.32■□□□□ 0.2
SHF-204ENST00000558685 POLR3GLQ9BT43 218 aa16.32■□□□□ 0.2
SHF-204ENST00000558685 NSD3Q9BZ95 1437 aa16.31■□□□□ 0.2
SHF-204ENST00000558685 ABCC6O95255 1503 aa16.3■□□□□ 0.2
SHF-204ENST00000558685 MAP3K19Q56UN5 1328 aa16.3■□□□□ 0.2
SHF-204ENST00000558685 TOM1L2Q6ZVM7 507 aa16.3■□□□□ 0.2
SHF-204ENST00000558685 THRAP3Q9Y2W1 955 aaKnown RBP16.3■□□□□ 0.2
SHF-204ENST00000558685 IP6K1Q92551 441 aa16.29■□□□□ 0.2
SHF-204ENST00000558685 CARD10Q9BWT7 1032 aa16.29■□□□□ 0.2
SHF-204ENST00000558685 LTN1O94822 1766 aa16.28■□□□□ 0.2
SHF-204ENST00000558685 ERBB3P21860 1342 aa16.28■□□□□ 0.2
SHF-204ENST00000558685 CSB-PGBD3P0DP91 1061 aa16.27■□□□□ 0.2
SHF-204ENST00000558685 RRS1Q15050 365 aaKnown RBP16.27■□□□□ 0.2
SHF-204ENST00000558685 CCDC125Q86Z20 511 aa16.27■□□□□ 0.2
SHF-204ENST00000558685 PANK3Q9H999 370 aa16.27■□□□□ 0.2
SHF-204ENST00000558685 KIF7Q2M1P5 1343 aa16.26■□□□□ 0.19
SHF-204ENST00000558685 ANKRD24Q8TF21 1146 aa16.26■□□□□ 0.19
SHF-204ENST00000558685 BLMP54132 1417 aaPredicted RBP16.26■□□□□ 0.19
SHF-204ENST00000558685 HOXC9P31274 260 aa16.25■□□□□ 0.19
SHF-204ENST00000558685 DISP2A7MBM2 1401 aa16.25■□□□□ 0.19
SHF-204ENST00000558685 KIF20BQ96Q89 1820 aa16.24■□□□□ 0.19
SHF-204ENST00000558685 CGNL1Q0VF96 1302 aa16.23■□□□□ 0.19
SHF-204ENST00000558685 PARP4Q9UKK3 1724 aaKnown RBP16.23■□□□□ 0.19
SHF-204ENST00000558685 DEFB132Q7Z7B7 95 aa16.23■□□□□ 0.19
SHF-204ENST00000558685 NLRP2Q9NX02 1062 aa16.23■□□□□ 0.19
SHF-204ENST00000558685 AMPHP49418 695 aa16.22■□□□□ 0.19
SHF-204ENST00000558685 PDE3BQ13370 1112 aa16.22■□□□□ 0.19
SHF-204ENST00000558685 LTV1Q96GA3 475 aaPredicted RBP16.22■□□□□ 0.19
SHF-204ENST00000558685 CCDC7Q96M83 1385 aa16.22■□□□□ 0.19
SHF-204ENST00000558685 FAM196AQ6ZSG2 479 aa16.21■□□□□ 0.19
SHF-204ENST00000558685 LRRC37A3O60309 1634 aa16.2■□□□□ 0.18
SHF-204ENST00000558685 PEAK1Q9H792 1746 aa16.2■□□□□ 0.18
SHF-204ENST00000558685 DDB1Q16531 1140 aa16.2■□□□□ 0.18
SHF-204ENST00000558685 HSP90AB2PQ58FF8 381 aa16.2■□□□□ 0.18
SHF-204ENST00000558685 MARCH10Q8NA82 808 aaPredicted RBP16.2■□□□□ 0.18
SHF-204ENST00000558685 CDCA7Q9BWT1 371 aaPredicted RBP16.2■□□□□ 0.18
SHF-204ENST00000558685 EMILIN1Q9Y6C2 1016 aa16.2■□□□□ 0.18
SHF-204ENST00000558685 RTL1A6NKG5 1358 aa16.2■□□□□ 0.18
SHF-204ENST00000558685 WNK3Q9BYP7 1800 aa16.19■□□□□ 0.18
SHF-204ENST00000558685 WASHC2AQ641Q2 1341 aa16.19■□□□□ 0.18
SHF-204ENST00000558685 TRIM37O94972 964 aa16.18■□□□□ 0.18
SHF-204ENST00000558685 PER1O15534 1290 aaPredicted RBP16.17■□□□□ 0.18
SHF-204ENST00000558685 NBPF6Q5VWK0 638 aa16.17■□□□□ 0.18
SHF-204ENST00000558685 NBPF4Q96M43 638 aa16.17■□□□□ 0.18
SHF-204ENST00000558685 POLKQ9UBT6 870 aa16.17■□□□□ 0.18
SHF-204ENST00000558685 INSRP06213 1382 aa16.16■□□□□ 0.18
SHF-204ENST00000558685 FLT4P35916 1363 aa16.16■□□□□ 0.18
SHF-204ENST00000558685 KIF24Q5T7B8 1368 aa16.16■□□□□ 0.18
SHF-204ENST00000558685 IL2RBP14784 551 aa16.16■□□□□ 0.18
SHF-204ENST00000558685 AMER1Q5JTC6 1135 aaPredicted RBP16.16■□□□□ 0.18
SHF-204ENST00000558685 PTF1AQ7RTS3 328 aa16.16■□□□□ 0.18
SHF-204ENST00000558685 EXOC5O00471 708 aa16.15■□□□□ 0.18
SHF-204ENST00000558685 TNNT2P45379 298 aaPredicted RBP16.15■□□□□ 0.18
SHF-204ENST00000558685 SF3B2Q13435 895 aaKnown RBP16.15■□□□□ 0.18
SHF-204ENST00000558685 RGPD2P0DJD1 1756 aa16.15■□□□□ 0.18
SHF-204ENST00000558685 FAM208AQ9UK61 1670 aaKnown RBP16.14■□□□□ 0.18
SHF-204ENST00000558685 TNS1Q9HBL0 1735 aaKnown RBP16.14■□□□□ 0.17
SHF-204ENST00000558685 OVOS2A0A0G2JMS6 1433 aa16.14■□□□□ 0.17
SHF-204ENST00000558685 TNS2Q63HR2 1409 aa16.14■□□□□ 0.17
SHF-204ENST00000558685 EN1Q05925 392 aaPredicted RBP16.14■□□□□ 0.17
SHF-204ENST00000558685 KNSTRNQ9Y448 316 aa16.14■□□□□ 0.17
SHF-204ENST00000558685 BCL9O00512 1426 aa16.13■□□□□ 0.17
SHF-204ENST00000558685 USHBP1Q8N6Y0 703 aa16.13■□□□□ 0.17
SHF-204ENST00000558685 RGPD1P0DJD0 1748 aa16.13■□□□□ 0.17
SHF-204ENST00000558685 ANKRD26Q9UPS8 1709 aa16.13■□□□□ 0.17
SHF-204ENST00000558685 NSD2O96028 1365 aa16.13■□□□□ 0.17
SHF-204ENST00000558685 PPM1GO15355 546 aaPredicted RBP16.12■□□□□ 0.17
SHF-204ENST00000558685 BAG6P46379 1132 aa16.12■□□□□ 0.17
SHF-204ENST00000558685 CAMKK2Q96RR4 588 aa16.12■□□□□ 0.17
SHF-204ENST00000558685 MAP2P11137 1827 aaKnown RBP16.12■□□□□ 0.17
SHF-204ENST00000558685 MEGF6O75095 1541 aa16.11■□□□□ 0.17
SHF-204ENST00000558685 APBA3O96018 575 aa16.11■□□□□ 0.17
SHF-204ENST00000558685 EZH2Q15910 746 aaKnown RBP16.1■□□□□ 0.17
SHF-204ENST00000558685 MORC1Q86VD1 984 aa16.1■□□□□ 0.17
SHF-204ENST00000558685 SBF2Q86WG5 1849 aa16.09■□□□□ 0.17
SHF-204ENST00000558685 KCNQ2O43526 872 aa16.08■□□□□ 0.16
SHF-204ENST00000558685 EYA1Q99502 592 aa16.08■□□□□ 0.16
SHF-204ENST00000558685 BCL11BQ9C0K0 894 aaPredicted RBP16.08■□□□□ 0.16
SHF-204ENST00000558685 NCAPD2Q15021 1401 aa16.08■□□□□ 0.16
SHF-204ENST00000558685 SMG6Q86US8 1419 aaKnown RBP16.08■□□□□ 0.16
SHF-204ENST00000558685 EIF4A2Q14240 407 aaKnown RBP16.07■□□□□ 0.16
SHF-204ENST00000558685 DDX54Q8TDD1 881 aaKnown RBP16.06■□□□□ 0.16
SHF-204ENST00000558685 CC2D1BQ5T0F9 858 aaKnown RBP16.05■□□□□ 0.16
SHF-204ENST00000558685 ZCRB1Q8TBF4 217 aaKnown RBP16.05■□□□□ 0.16
SHF-204ENST00000558685 PROM2Q8N271 834 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms