RNA–Protein interactions for RNA: ENST00000558605.1

IDH3A-209, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 4

Gene IDH3A, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-209ENST00000558605 PDGFDQ9GZP0 370 aaPredicted RBP29■■■□□ 2.23
IDH3A-209ENST00000558605 PROM2Q8N271 834 aa28.99■■■□□ 2.23
IDH3A-209ENST00000558605 AXIN2Q9Y2T1 843 aa28.99■■■□□ 2.23
IDH3A-209ENST00000558605 COL18A1P39060 1754 aa28.98■■■□□ 2.23
IDH3A-209ENST00000558605 CASZ1Q86V15 1759 aa28.98■■■□□ 2.23
IDH3A-209ENST00000558605 MARCH10Q8NA82 808 aaPredicted RBP28.98■■■□□ 2.23
IDH3A-209ENST00000558605 WDR17Q8IZU2 1322 aa28.96■■■□□ 2.23
IDH3A-209ENST00000558605 QRICH2Q9H0J4 1663 aa28.95■■■□□ 2.22
IDH3A-209ENST00000558605 PIK3C2AO00443 1686 aa28.94■■■□□ 2.22
IDH3A-209ENST00000558605 ZBTB7AO95365 584 aa28.94■■■□□ 2.22
IDH3A-209ENST00000558605 WNK3Q9BYP7 1800 aa28.93■■■□□ 2.22
IDH3A-209ENST00000558605 BCL9O00512 1426 aa28.93■■■□□ 2.22
IDH3A-209ENST00000558605 CDCA7Q9BWT1 371 aaPredicted RBP28.92■■■□□ 2.22
IDH3A-209ENST00000558605 CPSF1Q10570 1443 aaKnown RBP28.91■■■□□ 2.22
IDH3A-209ENST00000558605 PTGER2P43116 358 aa28.9■■■□□ 2.22
IDH3A-209ENST00000558605 ARHGEF25Q86VW2 580 aa28.9■■■□□ 2.22
IDH3A-209ENST00000558605 ATF5Q9Y2D1 282 aaPredicted RBP28.89■■■□□ 2.22
IDH3A-209ENST00000558605 TXNRD1Q16881 649 aa28.88■■■□□ 2.21
IDH3A-209ENST00000558605 CARD10Q9BWT7 1032 aa28.88■■■□□ 2.21
IDH3A-209ENST00000558605 MYOM1P52179 1685 aa28.88■■■□□ 2.21
IDH3A-209ENST00000558605 AKAP12Q02952 1782 aa28.88■■■□□ 2.21
IDH3A-209ENST00000558605 STK32BQ9NY57 414 aa28.87■■■□□ 2.21
IDH3A-209ENST00000558605 CSB-PGBD3P0DP91 1061 aa28.86■■■□□ 2.21
IDH3A-209ENST00000558605 TTC21BQ7Z4L5 1316 aa28.86■■■□□ 2.21
IDH3A-209ENST00000558605 RGPD5Q99666 1765 aa28.85■■■□□ 2.21
IDH3A-209ENST00000558605 SOX12O15370 315 aa28.85■■■□□ 2.21
IDH3A-209ENST00000558605 KCNH5Q8NCM2 988 aa28.85■■■□□ 2.21
IDH3A-209ENST00000558605 EXOC5O00471 708 aa28.84■■■□□ 2.21
IDH3A-209ENST00000558605 SLC15A2Q16348 729 aa28.84■■■□□ 2.21
IDH3A-209ENST00000558605 EVC2Q86UK5 1308 aa28.84■■■□□ 2.21
IDH3A-209ENST00000558605 ZNF692Q9BU19 519 aaPredicted RBP28.82■■■□□ 2.2
IDH3A-209ENST00000558605 FHDC1Q9C0D6 1143 aaPredicted RBP28.8■■■□□ 2.2
IDH3A-209ENST00000558605 ZNF784Q8NCA9 323 aaPredicted RBP28.79■■■□□ 2.2
IDH3A-209ENST00000558605 SYT17Q9BSW7 474 aa28.79■■■□□ 2.2
IDH3A-209ENST00000558605 TRPM1Q7Z4N2 1603 aa28.79■■■□□ 2.2
IDH3A-209ENST00000558605 NFAT5O94916 1531 aa28.78■■■□□ 2.2
IDH3A-209ENST00000558605 CCDC7Q96M83 1385 aa28.77■■■□□ 2.2
IDH3A-209ENST00000558605 TTC21AQ8NDW8 1320 aa28.77■■■□□ 2.2
IDH3A-209ENST00000558605 SGIP1Q9BQI5 828 aa28.77■■■□□ 2.2
IDH3A-209ENST00000558605 MTFR1LQ9H019 292 aa28.77■■■□□ 2.2
IDH3A-209ENST00000558605 TNS2Q63HR2 1409 aa28.76■■■□□ 2.19
IDH3A-209ENST00000558605 L3MBTL2Q969R5 705 aa28.75■■■□□ 2.19
IDH3A-209ENST00000558605 ACSBG1Q96GR2 724 aa28.73■■■□□ 2.19
IDH3A-209ENST00000558605 NHSQ6T4R5 1651 aa28.72■■■□□ 2.19
IDH3A-209ENST00000558605 KTN1Q86UP2 1357 aaKnown RBP28.71■■■□□ 2.19
IDH3A-209ENST00000558605 ABCC6O95255 1503 aa28.7■■■□□ 2.19
IDH3A-209ENST00000558605 ARXQ96QS3 562 aa28.68■■■□□ 2.18
IDH3A-209ENST00000558605 NLRP2Q9NX02 1062 aa28.67■■■□□ 2.18
IDH3A-209ENST00000558605 PAPPAQ13219 1627 aa28.66■■■□□ 2.18
IDH3A-209ENST00000558605 ERBB3P21860 1342 aa28.65■■■□□ 2.18
IDH3A-209ENST00000558605 ROCK2O75116 1388 aaKnown RBP28.64■■■□□ 2.18
IDH3A-209ENST00000558605 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.64■■■□□ 2.18
IDH3A-209ENST00000558605 UTRNP46939 3433 aa28.64■■■□□ 2.18
IDH3A-209ENST00000558605 USP31Q70CQ4 1352 aa28.63■■■□□ 2.17
IDH3A-209ENST00000558605 IL2RBP14784 551 aa28.63■■■□□ 2.17
IDH3A-209ENST00000558605 ZNF827Q17R98 1081 aa28.63■■■□□ 2.17
IDH3A-209ENST00000558605 MON2Q7Z3U7 1717 aa28.62■■■□□ 2.17
IDH3A-209ENST00000558605 NME9Q86XW9 330 aa28.61■■■□□ 2.17
IDH3A-209ENST00000558605 LRRC4BQ9NT99 713 aa28.61■■■□□ 2.17
IDH3A-209ENST00000558605 BTAF1O14981 1849 aa28.61■■■□□ 2.17
IDH3A-209ENST00000558605 MAP3K5Q99683 1374 aa28.61■■■□□ 2.17
IDH3A-209ENST00000558605 SIN3AQ96ST3 1273 aa28.6■■■□□ 2.17
IDH3A-209ENST00000558605 CHD4Q14839 1912 aa28.6■■■□□ 2.17
IDH3A-209ENST00000558605 ANKRD24Q8TF21 1146 aa28.59■■■□□ 2.17
IDH3A-209ENST00000558605 USP54Q70EL1 1684 aa28.58■■■□□ 2.16
IDH3A-209ENST00000558605 C1QTNF8P60827 252 aa28.57■■■□□ 2.16
IDH3A-209ENST00000558605 SENP3-EIF4A1A0A087X0R7 540 aa28.56■■■□□ 2.16
IDH3A-209ENST00000558605 CD163L1Q9NR16 1453 aa28.56■■■□□ 2.16
IDH3A-209ENST00000558605 SBNO2Q9Y2G9 1366 aa28.56■■■□□ 2.16
IDH3A-209ENST00000558605 LTN1O94822 1766 aa28.55■■■□□ 2.16
IDH3A-209ENST00000558605 AKT1S1Q96B36 256 aa28.55■■■□□ 2.16
IDH3A-209ENST00000558605 GPR162Q16538 588 aa28.54■■■□□ 2.16
IDH3A-209ENST00000558605 NEUROD1Q13562 356 aa28.52■■■□□ 2.16
IDH3A-209ENST00000558605 DDX54Q8TDD1 881 aaKnown RBP28.5■■■□□ 2.15
IDH3A-209ENST00000558605 TMC1Q8TDI8 760 aa28.5■■■□□ 2.15
IDH3A-209ENST00000558605 SLC16A10Q8TF71 515 aa28.5■■■□□ 2.15
IDH3A-209ENST00000558605 SLC27A3Q5K4L6 730 aa28.49■■■□□ 2.15
IDH3A-209ENST00000558605 KLHL34Q8N239 644 aa28.49■■■□□ 2.15
IDH3A-209ENST00000558605 PNPLA7Q6ZV29 1317 aa28.48■■■□□ 2.15
IDH3A-209ENST00000558605 HDGFL2Q7Z4V5 671 aaPredicted RBP28.48■■■□□ 2.15
IDH3A-209ENST00000558605 SLC12A5Q9H2X9 1139 aa28.48■■■□□ 2.15
IDH3A-209ENST00000558605 KAT6BQ8WYB5 2073 aa28.47■■■□□ 2.15
IDH3A-209ENST00000558605 POLD1P28340 1107 aa28.47■■■□□ 2.15
IDH3A-209ENST00000558605 EDC4Q6P2E9 1401 aaKnown RBP28.46■■■□□ 2.15
IDH3A-209ENST00000558605 KCNQ4P56696 695 aa28.46■■■□□ 2.15
IDH3A-209ENST00000558605 QSER1Q2KHR3 1735 aa28.46■■■□□ 2.15
IDH3A-209ENST00000558605 IP6K1Q92551 441 aa28.45■■■□□ 2.14
IDH3A-209ENST00000558605 COL24A1Q17RW2 1714 aa28.45■■■□□ 2.14
IDH3A-209ENST00000558605 LTV1Q96GA3 475 aaPredicted RBP28.44■■■□□ 2.14
IDH3A-209ENST00000558605 TFCP2L1Q9NZI6 479 aa28.44■■■□□ 2.14
IDH3A-209ENST00000558605 PELP1Q8IZL8 1130 aaKnown RBP28.43■■■□□ 2.14
IDH3A-209ENST00000558605 PRIM1P49642 420 aaKnown RBP28.42■■■□□ 2.14
IDH3A-209ENST00000558605 NLGN2Q8NFZ4 835 aa28.41■■■□□ 2.14
IDH3A-209ENST00000558605 SYTL4Q96C24 671 aaPredicted RBP28.41■■■□□ 2.14
IDH3A-209ENST00000558605 A0A1W2PP64 1363 aa28.4■■■□□ 2.14
IDH3A-209ENST00000558605 CARD11Q9BXL7 1154 aa28.4■■■□□ 2.14
IDH3A-209ENST00000558605 TERF2IPQ9NYB0 399 aa28.4■■■□□ 2.14
IDH3A-209ENST00000558605 TUBGCP6Q96RT7 1819 aa28.4■■■□□ 2.14
IDH3A-209ENST00000558605 GIGYF1O75420 1035 aaPredicted RBP28.39■■■□□ 2.14
IDH3A-209ENST00000558605 ANKRD36BQ8N2N9 1353 aa28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms