RNA–Protein interactions for RNA: ENST00000558415.5

SPG21-206, Transcript of SPG21, maspardin, humanhuman

TSL 3

Gene SPG21, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-206ENST00000558415 SLC24A1O60721 1099 aa20.12■□□□□ 0.81
SPG21-206ENST00000558415 BARGINQ6ZT62 677 aa20.12■□□□□ 0.81
SPG21-206ENST00000558415 LTN1O94822 1766 aa20.11■□□□□ 0.81
SPG21-206ENST00000558415 TCP11L2Q8N4U5 519 aa20.11■□□□□ 0.81
SPG21-206ENST00000558415 PARP4Q9UKK3 1724 aaKnown RBP20.1■□□□□ 0.81
SPG21-206ENST00000558415 TMF1P82094 1093 aa20.1■□□□□ 0.81
SPG21-206ENST00000558415 WNK3Q9BYP7 1800 aa20.1■□□□□ 0.81
SPG21-206ENST00000558415 RGPD1P0DJD0 1748 aa20.1■□□□□ 0.81
SPG21-206ENST00000558415 OVOS2A0A0J9YW53 1432 aa20.1■□□□□ 0.81
SPG21-206ENST00000558415 OVOS2Q6IE36 1432 aa20.1■□□□□ 0.81
SPG21-206ENST00000558415 ABCC6O95255 1503 aa20.09■□□□□ 0.81
SPG21-206ENST00000558415 DEFB132Q7Z7B7 95 aa20.09■□□□□ 0.81
SPG21-206ENST00000558415 TNS1Q9HBL0 1735 aaKnown RBP20.08■□□□□ 0.81
SPG21-206ENST00000558415 MYOM1P52179 1685 aa20.08■□□□□ 0.81
SPG21-206ENST00000558415 ANKRD36BQ8N2N9 1353 aa20.08■□□□□ 0.8
SPG21-206ENST00000558415 WDR17Q8IZU2 1322 aa20.07■□□□□ 0.8
SPG21-206ENST00000558415 THRAP3Q9Y2W1 955 aaKnown RBP20.07■□□□□ 0.8
SPG21-206ENST00000558415 LRRC37A3O60309 1634 aa20.06■□□□□ 0.8
SPG21-206ENST00000558415 SF3B2Q13435 895 aaKnown RBP20.06■□□□□ 0.8
SPG21-206ENST00000558415 TOM1L2Q6ZVM7 507 aa20.06■□□□□ 0.8
SPG21-206ENST00000558415 CSB-PGBD3P0DP91 1061 aa20.02■□□□□ 0.8
SPG21-206ENST00000558415 PDE3BQ13370 1112 aa20.02■□□□□ 0.8
SPG21-206ENST00000558415 CDCA8Q53HL2 280 aa20.01■□□□□ 0.79
SPG21-206ENST00000558415 FAM196AQ6ZSG2 479 aa20.01■□□□□ 0.79
SPG21-206ENST00000558415 KIF20BQ96Q89 1820 aa20.01■□□□□ 0.79
SPG21-206ENST00000558415 PEAK1Q9H792 1746 aa20.01■□□□□ 0.79
SPG21-206ENST00000558415 TRIM37O94972 964 aa19.99■□□□□ 0.79
SPG21-206ENST00000558415 BAG6P46379 1132 aa19.99■□□□□ 0.79
SPG21-206ENST00000558415 COG3Q96JB2 828 aa19.99■□□□□ 0.79
SPG21-206ENST00000558415 CARD10Q9BWT7 1032 aa19.99■□□□□ 0.79
SPG21-206ENST00000558415 DISP2A7MBM2 1401 aa19.99■□□□□ 0.79
SPG21-206ENST00000558415 ERBB3P21860 1342 aa19.99■□□□□ 0.79
SPG21-206ENST00000558415 FBLN1P23142 703 aa19.97■□□□□ 0.79
SPG21-206ENST00000558415 EN1Q05925 392 aaPredicted RBP19.97■□□□□ 0.79
SPG21-206ENST00000558415 FYB1O15117 783 aa19.96■□□□□ 0.79
SPG21-206ENST00000558415 DDB1Q16531 1140 aa19.96■□□□□ 0.79
SPG21-206ENST00000558415 GGNBP2Q9H3C7 697 aa19.96■□□□□ 0.79
SPG21-206ENST00000558415 CCDC7Q96M83 1385 aa19.95■□□□□ 0.79
SPG21-206ENST00000558415 SBF2Q86WG5 1849 aa19.95■□□□□ 0.78
SPG21-206ENST00000558415 HSPA5P11021 654 aaKnown RBP19.95■□□□□ 0.78
SPG21-206ENST00000558415 ANKRD24Q8TF21 1146 aa19.95■□□□□ 0.78
SPG21-206ENST00000558415 OVOS2A0A0G2JMS6 1433 aa19.94■□□□□ 0.78
SPG21-206ENST00000558415 EIF4G2P78344 907 aaKnown RBP eCLIP19.94■□□□□ 0.781e-8■■■■□ 22.8
SPG21-206ENST00000558415 CDCA7Q9BWT1 371 aaPredicted RBP19.94■□□□□ 0.78
SPG21-206ENST00000558415 CARD14Q9BXL6 1004 aa19.94■□□□□ 0.78
SPG21-206ENST00000558415 NLRP2Q9NX02 1062 aa19.94■□□□□ 0.78
SPG21-206ENST00000558415 MAP3K19Q56UN5 1328 aa19.94■□□□□ 0.78
SPG21-206ENST00000558415 NSD3Q9BZ95 1437 aa19.93■□□□□ 0.78
SPG21-206ENST00000558415 IP6K1Q92551 441 aa19.93■□□□□ 0.78
SPG21-206ENST00000558415 FAM208AQ9UK61 1670 aaKnown RBP19.93■□□□□ 0.78
SPG21-206ENST00000558415 SRCAPQ6ZRS2 3230 aa19.92■□□□□ 0.78
SPG21-206ENST00000558415 RGPD2P0DJD1 1756 aa19.91■□□□□ 0.78
SPG21-206ENST00000558415 APBA3O96018 575 aa19.91■□□□□ 0.78
SPG21-206ENST00000558415 EZH2Q15910 746 aaKnown RBP19.91■□□□□ 0.78
SPG21-206ENST00000558415 MARCH10Q8NA82 808 aaPredicted RBP19.91■□□□□ 0.78
SPG21-206ENST00000558415 POLR3GLQ9BT43 218 aa19.91■□□□□ 0.78
SPG21-206ENST00000558415 RREB1Q92766 1687 aa19.91■□□□□ 0.78
SPG21-206ENST00000558415 HOXC9P31274 260 aa19.9■□□□□ 0.78
SPG21-206ENST00000558415 RRS1Q15050 365 aaKnown RBP19.9■□□□□ 0.78
SPG21-206ENST00000558415 LTV1Q96GA3 475 aaPredicted RBP19.9■□□□□ 0.78
SPG21-206ENST00000558415 CAMKK2Q96RR4 588 aa19.9■□□□□ 0.78
SPG21-206ENST00000558415 TNS2Q63HR2 1409 aa19.9■□□□□ 0.78
SPG21-206ENST00000558415 AMPHP49418 695 aa19.88■□□□□ 0.77
SPG21-206ENST00000558415 NUP188Q5SRE5 1749 aa19.88■□□□□ 0.77
SPG21-206ENST00000558415 RTL1A6NKG5 1358 aa19.87■□□□□ 0.77
SPG21-206ENST00000558415 C11orf95C9JLR9 678 aaPredicted RBP19.87■□□□□ 0.77
SPG21-206ENST00000558415 EXOC5O00471 708 aa19.87■□□□□ 0.77
SPG21-206ENST00000558415 BCL9O00512 1426 aa19.86■□□□□ 0.77
SPG21-206ENST00000558415 IL2RBP14784 551 aa19.86■□□□□ 0.77
SPG21-206ENST00000558415 PTF1AQ7RTS3 328 aa19.86■□□□□ 0.77
SPG21-206ENST00000558415 PARD3Q8TEW0 1356 aa19.85■□□□□ 0.77
SPG21-206ENST00000558415 PSDA5PKW4 1024 aaPredicted RBP19.85■□□□□ 0.77
SPG21-206ENST00000558415 RGPD3A6NKT7 1758 aaPredicted RBP19.84■□□□□ 0.77
SPG21-206ENST00000558415 RGPD4Q7Z3J3 1758 aa19.84■□□□□ 0.77
SPG21-206ENST00000558415 ANKRD26Q9UPS8 1709 aa19.83■□□□□ 0.77
SPG21-206ENST00000558415 NHSQ6T4R5 1651 aa19.81■□□□□ 0.76
SPG21-206ENST00000558415 CGNL1Q0VF96 1302 aa19.81■□□□□ 0.76
SPG21-206ENST00000558415 BCL11BQ9C0K0 894 aaPredicted RBP19.81■□□□□ 0.76
SPG21-206ENST00000558415 SHANK3Q9BYB0 1731 aa19.81■□□□□ 0.76
SPG21-206ENST00000558415 FLT4P35916 1363 aa19.81■□□□□ 0.76
SPG21-206ENST00000558415 MAP2P11137 1827 aaKnown RBP19.81■□□□□ 0.76
SPG21-206ENST00000558415 R3HDM1Q15032 1099 aaKnown RBP19.8■□□□□ 0.76
SPG21-206ENST00000558415 HSP90AB2PQ58FF8 381 aa19.8■□□□□ 0.76
SPG21-206ENST00000558415 EMILIN1Q9Y6C2 1016 aa19.8■□□□□ 0.76
SPG21-206ENST00000558415 NBPF6Q5VWK0 638 aa19.79■□□□□ 0.76
SPG21-206ENST00000558415 NBPF4Q96M43 638 aa19.79■□□□□ 0.76
SPG21-206ENST00000558415 MEGF6O75095 1541 aa19.79■□□□□ 0.76
SPG21-206ENST00000558415 INSRP06213 1382 aa19.79■□□□□ 0.76
SPG21-206ENST00000558415 KIF24Q5T7B8 1368 aa19.79■□□□□ 0.76
SPG21-206ENST00000558415 SMG6Q86US8 1419 aaKnown RBP19.78■□□□□ 0.76
SPG21-206ENST00000558415 USHBP1Q8N6Y0 703 aa19.78■□□□□ 0.76
SPG21-206ENST00000558415 PANK3Q9H999 370 aa19.78■□□□□ 0.76
SPG21-206ENST00000558415 LRP5O75197 1615 aa19.77■□□□□ 0.76
SPG21-206ENST00000558415 KCNQ2O43526 872 aa19.77■□□□□ 0.76
SPG21-206ENST00000558415 PLSCR1O15162 318 aa19.76■□□□□ 0.75
SPG21-206ENST00000558415 ACSBG1Q96GR2 724 aa19.76■□□□□ 0.75
SPG21-206ENST00000558415 BTAF1O14981 1849 aa19.75■□□□□ 0.75
SPG21-206ENST00000558415 KAT6BQ8WYB5 2073 aa19.75■□□□□ 0.75
SPG21-206ENST00000558415 DDX54Q8TDD1 881 aaKnown RBP19.74■□□□□ 0.75
SPG21-206ENST00000558415 KIF7Q2M1P5 1343 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms