RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 THRAP3Q9Y2W1 955 aaKnown RBP11.73□□□□□ -0.53
TPM1-213ENST00000558400 COL14A1Q05707 1796 aaKnown RBP11.72□□□□□ -0.53
TPM1-213ENST00000558400 ZBTB7CA1YPR0 619 aa11.72□□□□□ -0.53
TPM1-213ENST00000558400 TNS1Q9HBL0 1735 aaKnown RBP11.72□□□□□ -0.53
TPM1-213ENST00000558400 SPATA31A1Q5TZJ5 1347 aa11.71□□□□□ -0.53
TPM1-213ENST00000558400 A0A0G2JS52 829 aa11.71□□□□□ -0.53
TPM1-213ENST00000558400 FYB1O15117 783 aa11.71□□□□□ -0.53
TPM1-213ENST00000558400 SOX12O15370 315 aa11.71□□□□□ -0.53
TPM1-213ENST00000558400 MYT1Q01538 1121 aa11.71□□□□□ -0.53
TPM1-213ENST00000558400 FAM98CQ17RN3 349 aaKnown RBP11.71□□□□□ -0.53
TPM1-213ENST00000558400 BARGINQ6ZT62 677 aa11.71□□□□□ -0.53
TPM1-213ENST00000558400 POLR3GLQ9BT43 218 aa11.71□□□□□ -0.53
TPM1-213ENST00000558400 AKAP12Q02952 1782 aa11.7□□□□□ -0.54
TPM1-213ENST00000558400 BAG6P46379 1132 aa11.7□□□□□ -0.54
TPM1-213ENST00000558400 LARP1Q6PKG0 1096 aaKnown RBP11.7□□□□□ -0.54
TPM1-213ENST00000558400 KRT27Q7Z3Y8 459 aa11.7□□□□□ -0.54
TPM1-213ENST00000558400 TCP11L2Q8N4U5 519 aa11.7□□□□□ -0.54
TPM1-213ENST00000558400 SLIT3O75094 1523 aa11.7□□□□□ -0.54
TPM1-213ENST00000558400 ABCA3Q99758 1704 aa11.69□□□□□ -0.54
TPM1-213ENST00000558400 TOM1L2Q6ZVM7 507 aa11.69□□□□□ -0.54
TPM1-213ENST00000558400 USP35Q9P2H5 1018 aa11.69□□□□□ -0.54
TPM1-213ENST00000558400 AXIN2Q9Y2T1 843 aa11.69□□□□□ -0.54
TPM1-213ENST00000558400 CGNL1Q0VF96 1302 aa11.68□□□□□ -0.54
TPM1-213ENST00000558400 CSB-PGBD3P0DP91 1061 aa11.68□□□□□ -0.54
TPM1-213ENST00000558400 IFFO2Q5TF58 517 aa11.68□□□□□ -0.54
TPM1-213ENST00000558400 CDCA7Q9BWT1 371 aaPredicted RBP11.68□□□□□ -0.54
TPM1-213ENST00000558400 CARD14Q9BXL6 1004 aa11.68□□□□□ -0.54
TPM1-213ENST00000558400 CAMTA1Q9Y6Y1 1673 aa11.68□□□□□ -0.54
TPM1-213ENST00000558400 WDR17Q8IZU2 1322 aa11.67□□□□□ -0.54
TPM1-213ENST00000558400 CRYBG1Q9Y4K1 1723 aa11.67□□□□□ -0.54
TPM1-213ENST00000558400 C11orf95C9JLR9 678 aaPredicted RBP11.67□□□□□ -0.54
TPM1-213ENST00000558400 IP6K1Q92551 441 aa11.67□□□□□ -0.54
TPM1-213ENST00000558400 CARD10Q9BWT7 1032 aa11.67□□□□□ -0.54
TPM1-213ENST00000558400 GGNBP2Q9H3C7 697 aa11.67□□□□□ -0.54
TPM1-213ENST00000558400 PHRF1Q9P1Y6 1649 aaKnown RBP11.67□□□□□ -0.54
TPM1-213ENST00000558400 NRKQ7Z2Y5 1582 aa11.67□□□□□ -0.54
TPM1-213ENST00000558400 MON2Q7Z3U7 1717 aa11.66□□□□□ -0.54
TPM1-213ENST00000558400 PIK3C2AO00443 1686 aa11.66□□□□□ -0.54
TPM1-213ENST00000558400 AMPHP49418 695 aa11.66□□□□□ -0.54
TPM1-213ENST00000558400 PDE3BQ13370 1112 aa11.66□□□□□ -0.54
TPM1-213ENST00000558400 PANK3Q9H999 370 aa11.66□□□□□ -0.54
TPM1-213ENST00000558400 DISP2A7MBM2 1401 aa11.66□□□□□ -0.54
TPM1-213ENST00000558400 CRB1P82279 1406 aa11.66□□□□□ -0.54
TPM1-213ENST00000558400 NRAPQ86VF7 1730 aa11.66□□□□□ -0.54
TPM1-213ENST00000558400 COL5A2P05997 1499 aaPredicted RBP11.65□□□□□ -0.54
TPM1-213ENST00000558400 R3HDM1Q15032 1099 aaKnown RBP11.65□□□□□ -0.54
TPM1-213ENST00000558400 OVOS2A0A0J9YW53 1432 aa11.65□□□□□ -0.54
TPM1-213ENST00000558400 OVOS2Q6IE36 1432 aa11.65□□□□□ -0.54
TPM1-213ENST00000558400 RREB1Q92766 1687 aa11.65□□□□□ -0.55
TPM1-213ENST00000558400 FAM196AQ6ZSG2 479 aa11.64□□□□□ -0.55
TPM1-213ENST00000558400 KNSTRNQ9Y448 316 aa11.64□□□□□ -0.55
TPM1-213ENST00000558400 NUP188Q5SRE5 1749 aa11.63□□□□□ -0.55
TPM1-213ENST00000558400 NSD3Q9BZ95 1437 aa11.63□□□□□ -0.55
TPM1-213ENST00000558400 ANKRD24Q8TF21 1146 aa11.63□□□□□ -0.55
TPM1-213ENST00000558400 NLRP2Q9NX02 1062 aa11.63□□□□□ -0.55
TPM1-213ENST00000558400 CCDC7Q96M83 1385 aa11.63□□□□□ -0.55
TPM1-213ENST00000558400 ERBB3P21860 1342 aa11.62□□□□□ -0.55
TPM1-213ENST00000558400 MAP3K19Q56UN5 1328 aa11.62□□□□□ -0.55
TPM1-213ENST00000558400 NFAT5O94916 1531 aa11.62□□□□□ -0.55
TPM1-213ENST00000558400 ABCC6O95255 1503 aa11.62□□□□□ -0.55
TPM1-213ENST00000558400 EXOC5O00471 708 aa11.62□□□□□ -0.55
TPM1-213ENST00000558400 HOXC9P31274 260 aa11.62□□□□□ -0.55
TPM1-213ENST00000558400 EN1Q05925 392 aaPredicted RBP11.62□□□□□ -0.55
TPM1-213ENST00000558400 DDB1Q16531 1140 aa11.62□□□□□ -0.55
TPM1-213ENST00000558400 KIF24Q5T7B8 1368 aa11.62□□□□□ -0.55
TPM1-213ENST00000558400 LMO7Q8WWI1 1683 aa11.62□□□□□ -0.55
TPM1-213ENST00000558400 KIF7Q2M1P5 1343 aa11.61□□□□□ -0.55
TPM1-213ENST00000558400 CHD4Q14839 1912 aa11.61□□□□□ -0.55
TPM1-213ENST00000558400 FBLN1P23142 703 aa11.61□□□□□ -0.55
TPM1-213ENST00000558400 U3KPZ7 1027 aaPredicted RBP11.61□□□□□ -0.55
TPM1-213ENST00000558400 USP54Q70EL1 1684 aa11.6□□□□□ -0.55
TPM1-213ENST00000558400 THSD7AQ9UPZ6 1657 aa11.6□□□□□ -0.55
TPM1-213ENST00000558400 RRS1Q15050 365 aaKnown RBP11.6□□□□□ -0.55
TPM1-213ENST00000558400 RTL1A6NKG5 1358 aa11.59□□□□□ -0.55
TPM1-213ENST00000558400 NSD2O96028 1365 aa11.59□□□□□ -0.55
TPM1-213ENST00000558400 IL2RBP14784 551 aa11.59□□□□□ -0.55
TPM1-213ENST00000558400 LTV1Q96GA3 475 aaPredicted RBP11.59□□□□□ -0.55
TPM1-213ENST00000558400 COL18A1P39060 1754 aa11.59□□□□□ -0.55
TPM1-213ENST00000558400 SENP3-EIF4A1A0A087X0R7 540 aa11.58□□□□□ -0.56
TPM1-213ENST00000558400 MORC1Q86VD1 984 aa11.58□□□□□ -0.56
TPM1-213ENST00000558400 INSRP06213 1382 aa11.57□□□□□ -0.56
TPM1-213ENST00000558400 FLT4P35916 1363 aa11.57□□□□□ -0.56
TPM1-213ENST00000558400 PPM1GO15355 546 aaPredicted RBP11.57□□□□□ -0.56
TPM1-213ENST00000558400 PER1O15534 1290 aaPredicted RBP11.57□□□□□ -0.56
TPM1-213ENST00000558400 ZEB1P37275 1124 aaPredicted RBP11.57□□□□□ -0.56
TPM1-213ENST00000558400 HSP90AB2PQ58FF8 381 aa11.57□□□□□ -0.56
TPM1-213ENST00000558400 WASHC2AQ641Q2 1341 aa11.57□□□□□ -0.56
TPM1-213ENST00000558400 FAM182BQ5T319 152 aa11.56□□□□□ -0.56
TPM1-213ENST00000558400 SMG6Q86US8 1419 aaKnown RBP11.56□□□□□ -0.56
TPM1-213ENST00000558400 POLKQ9UBT6 870 aa11.56□□□□□ -0.56
TPM1-213ENST00000558400 PARD3Q8TEW0 1356 aa11.55□□□□□ -0.56
TPM1-213ENST00000558400 SLC4A2P04920 1241 aa11.55□□□□□ -0.56
TPM1-213ENST00000558400 EZH2Q15910 746 aaKnown RBP11.55□□□□□ -0.56
TPM1-213ENST00000558400 AMER1Q5JTC6 1135 aaPredicted RBP11.55□□□□□ -0.56
TPM1-213ENST00000558400 EMILIN1Q9Y6C2 1016 aa11.55□□□□□ -0.56
TPM1-213ENST00000558400 TRIM37O94972 964 aa11.54□□□□□ -0.56
TPM1-213ENST00000558400 TNNT2P45379 298 aaPredicted RBP11.54□□□□□ -0.56
TPM1-213ENST00000558400 NBPF6Q5VWK0 638 aa11.54□□□□□ -0.56
TPM1-213ENST00000558400 ZNF784Q8NCA9 323 aaPredicted RBP11.54□□□□□ -0.56
TPM1-213ENST00000558400 RAPGEF4Q8WZA2 1011 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms