RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 TUBB4AP04350 444 aa13.87□□□□□ -0.19
CSPG4P12-201ENST00000558282 SPATA32Q96LK8 384 aa13.87□□□□□ -0.19
CSPG4P12-201ENST00000558282 CYP46A1Q9Y6A2 500 aa13.87□□□□□ -0.19
CSPG4P12-201ENST00000558282 PLEKHH1Q9ULM0 1364 aa13.87□□□□□ -0.19
CSPG4P12-201ENST00000558282 PNISRQ8TF01 805 aaKnown RBP13.87□□□□□ -0.19
CSPG4P12-201ENST00000558282 URI1O94763 535 aaPredicted RBP13.86□□□□□ -0.19
CSPG4P12-201ENST00000558282 CAVIN2O95810 425 aa13.86□□□□□ -0.19
CSPG4P12-201ENST00000558282 EZRP15311 586 aaKnown RBP13.86□□□□□ -0.19
CSPG4P12-201ENST00000558282 ADAMTS8Q9UP79 889 aa13.86□□□□□ -0.19
CSPG4P12-201ENST00000558282 TDO2P48775 406 aa13.86□□□□□ -0.19
CSPG4P12-201ENST00000558282 ZKSCAN5Q9Y2L8 839 aa13.86□□□□□ -0.19
CSPG4P12-201ENST00000558282 EPB41L2O43491 1005 aaKnown RBP13.86□□□□□ -0.19
CSPG4P12-201ENST00000558282 CASQ1P31415 396 aa13.86□□□□□ -0.19
CSPG4P12-201ENST00000558282 ENOX2Q16206 610 aaKnown RBP13.86□□□□□ -0.19
CSPG4P12-201ENST00000558282 TNPO1Q92973 898 aaKnown RBP13.86□□□□□ -0.19
CSPG4P12-201ENST00000558282 STAC3Q96MF2 364 aa13.86□□□□□ -0.19
CSPG4P12-201ENST00000558282 GAPVD1Q14C86 1478 aa13.86□□□□□ -0.19
CSPG4P12-201ENST00000558282 SYNJ1O43426 1573 aa13.86□□□□□ -0.19
CSPG4P12-201ENST00000558282 TXLNAP40222 546 aa13.86□□□□□ -0.19
CSPG4P12-201ENST00000558282 RASSF4Q9H2L5 321 aa13.86□□□□□ -0.19
CSPG4P12-201ENST00000558282 OGFRQ9NZT2 677 aa13.86□□□□□ -0.19
CSPG4P12-201ENST00000558282 SEPT7Q16181 437 aaKnown RBP13.85□□□□□ -0.19
CSPG4P12-201ENST00000558282 TDRD9Q8NDG6 1382 aaKnown RBP13.85□□□□□ -0.19
CSPG4P12-201ENST00000558282 CCDC171Q6TFL3 1326 aa13.85□□□□□ -0.19
CSPG4P12-201ENST00000558282 KIF5CO60282 957 aa13.85□□□□□ -0.19
CSPG4P12-201ENST00000558282 GNAI3P08754 354 aa13.85□□□□□ -0.19
CSPG4P12-201ENST00000558282 LARP1BQ659C4 914 aaKnown RBP13.85□□□□□ -0.19
CSPG4P12-201ENST00000558282 CLASRPQ8N2M8 674 aaKnown RBP13.85□□□□□ -0.19
CSPG4P12-201ENST00000558282 CCDC83Q8IWF9 413 aa13.85□□□□□ -0.19
CSPG4P12-201ENST00000558282 TBC1D2Q9BYX2 928 aa13.85□□□□□ -0.19
CSPG4P12-201ENST00000558282 TTC31Q49AM3 519 aaPredicted RBP13.84□□□□□ -0.19
CSPG4P12-201ENST00000558282 VPS53Q5VIR6 699 aa13.84□□□□□ -0.19
CSPG4P12-201ENST00000558282 LRRFIP2Q9Y608 721 aaKnown RBP13.84□□□□□ -0.19
CSPG4P12-201ENST00000558282 RUSC2Q8N2Y8 1516 aa13.84□□□□□ -0.19
CSPG4P12-201ENST00000558282 ME1P48163 572 aa13.84□□□□□ -0.19
CSPG4P12-201ENST00000558282 RNF187Q5TA31 235 aaPredicted RBP13.84□□□□□ -0.19
CSPG4P12-201ENST00000558282 C16orf45Q96MC5 204 aaPredicted RBP13.84□□□□□ -0.19
CSPG4P12-201ENST00000558282 ANO10Q9NW15 660 aa13.84□□□□□ -0.19
CSPG4P12-201ENST00000558282 CLIP2Q9UDT6 1046 aa13.84□□□□□ -0.19
CSPG4P12-201ENST00000558282 PRXQ9BXM0 1461 aa13.84□□□□□ -0.19
CSPG4P12-201ENST00000558282 GBP2P32456 591 aaPredicted RBP13.83□□□□□ -0.2
CSPG4P12-201ENST00000558282 RBM25P49756 843 aaKnown RBP13.83□□□□□ -0.2
CSPG4P12-201ENST00000558282 NOLC1Q14978 699 aaKnown RBP eCLIP13.83□□□□□ -0.2
CSPG4P12-201ENST00000558282 CHD1LQ86WJ1 897 aa13.83□□□□□ -0.2
CSPG4P12-201ENST00000558282 EVC2Q86UK5 1308 aa13.83□□□□□ -0.2
CSPG4P12-201ENST00000558282 BRPF1P55201 1214 aaPredicted RBP13.83□□□□□ -0.2
CSPG4P12-201ENST00000558282 USP25Q9UHP3 1055 aa13.83□□□□□ -0.2
CSPG4P12-201ENST00000558282 MAP2K1Q02750 393 aaPredicted RBP13.83□□□□□ -0.2
CSPG4P12-201ENST00000558282 STIM1Q13586 685 aa13.83□□□□□ -0.2
CSPG4P12-201ENST00000558282 MVPQ14764 893 aaKnown RBP13.83□□□□□ -0.2
CSPG4P12-201ENST00000558282 TAX1BP1Q86VP1 789 aa13.83□□□□□ -0.2
CSPG4P12-201ENST00000558282 CTAGE5O15320 804 aa13.82□□□□□ -0.2
CSPG4P12-201ENST00000558282 FOSBP53539 338 aa13.82□□□□□ -0.2
CSPG4P12-201ENST00000558282 IMMTQ16891 758 aaKnown RBP13.82□□□□□ -0.2
CSPG4P12-201ENST00000558282 RBM28Q9NW13 759 aaKnown RBP13.82□□□□□ -0.2
CSPG4P12-201ENST00000558282 FKBP5Q13451 457 aaPredicted RBP13.82□□□□□ -0.2
CSPG4P12-201ENST00000558282 CEP135Q66GS9 1140 aa13.82□□□□□ -0.2
CSPG4P12-201ENST00000558282 SCAND2PQ9GZW5 306 aaPredicted RBP13.82□□□□□ -0.2
CSPG4P12-201ENST00000558282 FYCO1Q9BQS8 1478 aa13.82□□□□□ -0.2
CSPG4P12-201ENST00000558282 DDX58O95786 925 aaKnown RBP13.82□□□□□ -0.2
CSPG4P12-201ENST00000558282 SRCIN1Q9C0H9 1055 aa13.82□□□□□ -0.2
CSPG4P12-201ENST00000558282 CLGNO14967 610 aa13.81□□□□□ -0.2
CSPG4P12-201ENST00000558282 ADCY5O95622 1261 aa13.81□□□□□ -0.2
CSPG4P12-201ENST00000558282 CASKIN1Q8WXD9 1431 aa13.81□□□□□ -0.2
CSPG4P12-201ENST00000558282 GABPB1Q06547 395 aaPredicted RBP13.81□□□□□ -0.2
CSPG4P12-201ENST00000558282 WWC1Q8IX03 1113 aa13.81□□□□□ -0.2
CSPG4P12-201ENST00000558282 V9GYY5 206 aaPredicted RBP13.81□□□□□ -0.2
CSPG4P12-201ENST00000558282 KIF4BQ2VIQ3 1234 aa13.81□□□□□ -0.2
CSPG4P12-201ENST00000558282 AMOTL1Q8IY63 956 aa13.81□□□□□ -0.2
CSPG4P12-201ENST00000558282 SRRTQ9BXP5 876 aaKnown RBP13.81□□□□□ -0.2
CSPG4P12-201ENST00000558282 FHOD3Q2V2M9 1422 aa13.81□□□□□ -0.2
CSPG4P12-201ENST00000558282 DNMBPQ6XZF7 1577 aa13.81□□□□□ -0.2
CSPG4P12-201ENST00000558282 AMPHP49418 695 aa13.8□□□□□ -0.2
CSPG4P12-201ENST00000558282 ZNF397Q8NF99 534 aaPredicted RBP13.8□□□□□ -0.2
CSPG4P12-201ENST00000558282 DHX29Q7Z478 1369 aaKnown RBP13.8□□□□□ -0.2
CSPG4P12-201ENST00000558282 CFAP100Q494V2 611 aa13.8□□□□□ -0.2
CSPG4P12-201ENST00000558282 GIGYF2Q6Y7W6 1299 aaKnown RBP13.8□□□□□ -0.2
CSPG4P12-201ENST00000558282 A0A1B0GUL7 405 aa13.8□□□□□ -0.2
CSPG4P12-201ENST00000558282 TUBB4BP68371 445 aa13.8□□□□□ -0.2
CSPG4P12-201ENST00000558282 SMC1AQ14683 1233 aaKnown RBP13.8□□□□□ -0.2
CSPG4P12-201ENST00000558282 SNW1Q13573 536 aaKnown RBP13.8□□□□□ -0.2
CSPG4P12-201ENST00000558282 LRSAM1Q6UWE0 723 aa13.8□□□□□ -0.2
CSPG4P12-201ENST00000558282 ARFGAP3Q9NP61 516 aa13.8□□□□□ -0.2
CSPG4P12-201ENST00000558282 WDR63Q8IWG1 891 aa13.79□□□□□ -0.2
CSPG4P12-201ENST00000558282 TRIM34Q9BYJ4 488 aa13.79□□□□□ -0.2
CSPG4P12-201ENST00000558282 CCDC175P0C221 793 aa13.79□□□□□ -0.2
CSPG4P12-201ENST00000558282 UBTFL1P0CB47 393 aaPredicted RBP13.79□□□□□ -0.2
CSPG4P12-201ENST00000558282 TAF4BQ92750 862 aa13.79□□□□□ -0.2
CSPG4P12-201ENST00000558282 HSPA4P34932 840 aa13.79□□□□□ -0.2
CSPG4P12-201ENST00000558282 SPECC1LQ69YQ0 1117 aa13.79□□□□□ -0.2
CSPG4P12-201ENST00000558282 DDX19AQ9NUU7 478 aaKnown RBP13.79□□□□□ -0.2
CSPG4P12-201ENST00000558282 FSD1Q9BTV5 496 aa13.78□□□□□ -0.2
CSPG4P12-201ENST00000558282 SPATA24Q86W54 205 aa13.78□□□□□ -0.2
CSPG4P12-201ENST00000558282 TCP11L2Q8N4U5 519 aa13.78□□□□□ -0.2
CSPG4P12-201ENST00000558282 COG3Q96JB2 828 aa13.78□□□□□ -0.2
CSPG4P12-201ENST00000558282 CCDC150Q8NCX0 1101 aa13.78□□□□□ -0.2
CSPG4P12-201ENST00000558282 BCAR3O75815 825 aa13.77□□□□□ -0.2
CSPG4P12-201ENST00000558282 BAG4O95429 457 aaKnown RBP13.77□□□□□ -0.2
CSPG4P12-201ENST00000558282 SSFA2P28290 1259 aa13.77□□□□□ -0.2
CSPG4P12-201ENST00000558282 ERC1Q8IUD2 1116 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms